RNA–Protein interactions for RNA: ENST00000540317.5

CYB561A3-215, Transcript of cytochrome b561 family member A3, humanhuman

TSL 3

Gene CYB561A3, Length 1,557 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYB561A3-215ENST00000540317 MGAT3Q09327 533 aa12.86□□□□□ -0.35
CYB561A3-215ENST00000540317 MXD4Q14582 209 aaPredicted RBP12.86□□□□□ -0.35
CYB561A3-215ENST00000540317 C1orf220Q5T0J3 134 aa12.86□□□□□ -0.35
CYB561A3-215ENST00000540317 TEX35Q5T0J7 233 aa12.86□□□□□ -0.35
CYB561A3-215ENST00000540317 ALKBH5Q6P6C2 394 aaKnown RBP12.86□□□□□ -0.35
CYB561A3-215ENST00000540317 NME8Q8N427 588 aa12.86□□□□□ -0.35
CYB561A3-215ENST00000540317 METTL13Q8N6R0 699 aa12.86□□□□□ -0.35
CYB561A3-215ENST00000540317 CALR3Q96L12 384 aaKnown RBP12.86□□□□□ -0.35
CYB561A3-215ENST00000540317 YME1L1Q96TA2 773 aa12.86□□□□□ -0.35
CYB561A3-215ENST00000540317 KIFC3Q9BVG8 833 aa12.86□□□□□ -0.35
CYB561A3-215ENST00000540317 TMEM117Q9H0C3 514 aa12.86□□□□□ -0.35
CYB561A3-215ENST00000540317 RNF14Q9UBS8 474 aa12.86□□□□□ -0.35
CYB561A3-215ENST00000540317 SNX12Q9UMY4 172 aa12.86□□□□□ -0.35
CYB561A3-215ENST00000540317 GBF1Q92538 1859 aa12.85□□□□□ -0.35
CYB561A3-215ENST00000540317 PRUNE2Q8WUY3 3088 aa12.85□□□□□ -0.35
CYB561A3-215ENST00000540317 MYH9P35579 1960 aaKnown RBP12.85□□□□□ -0.35
CYB561A3-215ENST00000540317 LINC01553A4QN01 128 aa12.85□□□□□ -0.35
CYB561A3-215ENST00000540317 LRRIQ4A6NIV6 560 aa12.85□□□□□ -0.35
CYB561A3-215ENST00000540317 ZC3H11AO75152 810 aaKnown RBP eCLIP12.85□□□□□ -0.35
CYB561A3-215ENST00000540317 GLRA2P23416 452 aa12.85□□□□□ -0.35
CYB561A3-215ENST00000540317 CD52P31358 61 aa12.85□□□□□ -0.35
CYB561A3-215ENST00000540317 GCLMP48507 274 aa12.85□□□□□ -0.35
CYB561A3-215ENST00000540317 GPC3P51654 580 aa12.85□□□□□ -0.35
CYB561A3-215ENST00000540317 MFAP3P55082 362 aa12.85□□□□□ -0.35
CYB561A3-215ENST00000540317 NAP1L1P55209 391 aaKnown RBP12.85□□□□□ -0.35
CYB561A3-215ENST00000540317 MKRN4PQ13434 485 aaPredicted RBP12.85□□□□□ -0.35
CYB561A3-215ENST00000540317 SKIV2LQ15477 1246 aaKnown RBP12.85□□□□□ -0.35
CYB561A3-215ENST00000540317 PHLDB3Q6NSJ2 640 aa12.85□□□□□ -0.35
CYB561A3-215ENST00000540317 SLC39A4Q6P5W5 647 aa12.85□□□□□ -0.35
CYB561A3-215ENST00000540317 TSHZ1Q6ZSZ6 1077 aa12.85□□□□□ -0.35
CYB561A3-215ENST00000540317 TAS1R3Q7RTX0 852 aa12.85□□□□□ -0.35
CYB561A3-215ENST00000540317 CBWD2Q8IUF1 395 aa12.85□□□□□ -0.35
CYB561A3-215ENST00000540317 TMEM143Q96AN5 459 aa12.85□□□□□ -0.35
CYB561A3-215ENST00000540317 TGS1Q96RS0 853 aaKnown RBP12.85□□□□□ -0.35
CYB561A3-215ENST00000540317 CELF4Q9BZC1 486 aaKnown RBP12.85□□□□□ -0.35
CYB561A3-215ENST00000540317 AGO3Q9H9G7 860 aaKnown RBP12.85□□□□□ -0.35
CYB561A3-215ENST00000540317 UBE2TQ9NPD8 197 aaPredicted RBP12.85□□□□□ -0.35
CYB561A3-215ENST00000540317 PRDM6Q9NQX0 595 aa12.85□□□□□ -0.35
CYB561A3-215ENST00000540317 NENFQ9UMX5 172 aa12.85□□□□□ -0.35
CYB561A3-215ENST00000540317 HYOU1Q9Y4L1 999 aa12.85□□□□□ -0.35
CYB561A3-215ENST00000540317 TRPV2Q9Y5S1 764 aa12.85□□□□□ -0.35
CYB561A3-215ENST00000540317 ADGRA3Q8IWK6 1321 aa12.85□□□□□ -0.35
CYB561A3-215ENST00000540317 CHD7Q9P2D1 2997 aa12.84□□□□□ -0.35
CYB561A3-215ENST00000540317 GOLGA8IPA6NC78 632 aa12.84□□□□□ -0.35
CYB561A3-215ENST00000540317 GOLGA8JA6NMD2 632 aa12.84□□□□□ -0.35
CYB561A3-215ENST00000540317 ENPP3O14638 875 aa12.84□□□□□ -0.35
CYB561A3-215ENST00000540317 ENC1O14682 589 aa12.84□□□□□ -0.35
CYB561A3-215ENST00000540317 ADRB2P07550 413 aa12.84□□□□□ -0.35
CYB561A3-215ENST00000540317 H2AFZP0C0S5 128 aa12.84□□□□□ -0.35
CYB561A3-215ENST00000540317 ITIH3Q06033 890 aa12.84□□□□□ -0.35
CYB561A3-215ENST00000540317 ENOX2Q16206 610 aaKnown RBP12.84□□□□□ -0.35
CYB561A3-215ENST00000540317 GJB7Q6PEY0 223 aa12.84□□□□□ -0.35
CYB561A3-215ENST00000540317 FBXO38Q6PIJ6 1188 aa12.84□□□□□ -0.35
CYB561A3-215ENST00000540317 H2AFVQ71UI9 128 aa12.84□□□□□ -0.35
CYB561A3-215ENST00000540317 ENOSF1Q7L5Y1 443 aa12.84□□□□□ -0.35
CYB561A3-215ENST00000540317 KIAA0319LQ8IZA0 1049 aa12.84□□□□□ -0.35
CYB561A3-215ENST00000540317 FBXL13Q8NEE6 735 aa12.84□□□□□ -0.35
CYB561A3-215ENST00000540317 SLC30A5Q8TAD4 765 aa12.84□□□□□ -0.35
CYB561A3-215ENST00000540317 ASAP3Q8TDY4 903 aa12.84□□□□□ -0.35
CYB561A3-215ENST00000540317 UBE2Q2Q8WVN8 375 aa12.84□□□□□ -0.35
CYB561A3-215ENST00000540317 SAAL1Q96ER3 474 aa12.84□□□□□ -0.35
CYB561A3-215ENST00000540317 C2orf40Q9H1Z8 148 aa12.84□□□□□ -0.35
CYB561A3-215ENST00000540317 PUF60Q9UHX1 559 aaKnown RBP12.84□□□□□ -0.35
CYB561A3-215ENST00000540317 AJAP1Q9UKB5 411 aaPredicted RBP12.84□□□□□ -0.35
CYB561A3-215ENST00000540317 PCDHGC5Q9Y5F6 944 aa12.84□□□□□ -0.35
CYB561A3-215ENST00000540317 MTCH2Q9Y6C9 303 aa12.84□□□□□ -0.35
CYB561A3-215ENST00000540317 CAPN6Q9Y6Q1 641 aa12.84□□□□□ -0.35
CYB561A3-215ENST00000540317 COL1A2P08123 1366 aa12.84□□□□□ -0.35
CYB561A3-215ENST00000540317 LRRIQ3A6PVS8 624 aaPredicted RBP12.83□□□□□ -0.36
CYB561A3-215ENST00000540317 ZBTB42B2RXF5 422 aa12.83□□□□□ -0.36
CYB561A3-215ENST00000540317 ASAP2O43150 1006 aa12.83□□□□□ -0.36
CYB561A3-215ENST00000540317 TNFAIP3P21580 790 aa12.83□□□□□ -0.36
CYB561A3-215ENST00000540317 MCM3P25205 808 aa12.83□□□□□ -0.36
CYB561A3-215ENST00000540317 CLDN10P78369 228 aa12.83□□□□□ -0.36
CYB561A3-215ENST00000540317 HTRA4P83105 476 aaPredicted RBP12.83□□□□□ -0.36
CYB561A3-215ENST00000540317 NFX1Q12986 1120 aaKnown RBP12.83□□□□□ -0.36
CYB561A3-215ENST00000540317 PAK2Q13177 524 aa12.83□□□□□ -0.36
CYB561A3-215ENST00000540317 PSMD6Q15008 389 aa12.83□□□□□ -0.36
CYB561A3-215ENST00000540317 BRD3Q15059 726 aa12.83□□□□□ -0.36
CYB561A3-215ENST00000540317 SMYD5Q6GMV2 418 aa12.83□□□□□ -0.36
CYB561A3-215ENST00000540317 ZPBP2Q6X784 338 aa12.83□□□□□ -0.36
CYB561A3-215ENST00000540317 ZNF572Q7Z3I7 529 aaPredicted RBP12.83□□□□□ -0.36
CYB561A3-215ENST00000540317 PLEKHO2Q8TD55 490 aa12.83□□□□□ -0.36
CYB561A3-215ENST00000540317 PSPC1Q8WXF1 523 aaKnown RBP12.83□□□□□ -0.36
CYB561A3-215ENST00000540317 NT5C1BQ96P26 610 aa12.83□□□□□ -0.36
CYB561A3-215ENST00000540317 PPP1R16BQ96T49 567 aa12.83□□□□□ -0.36
CYB561A3-215ENST00000540317 GPR88Q9GZN0 384 aa12.83□□□□□ -0.36
CYB561A3-215ENST00000540317 TSPYL2Q9H2G4 693 aaPredicted RBP12.83□□□□□ -0.36
CYB561A3-215ENST00000540317 SUGCTQ9HAC7 445 aa12.83□□□□□ -0.36
CYB561A3-215ENST00000540317 AGO2Q9UKV8 859 aaKnown RBP12.83□□□□□ -0.36
CYB561A3-215ENST00000540317 PADI3Q9ULW8 664 aa12.83□□□□□ -0.36
CYB561A3-215ENST00000540317 SQORQ9Y6N5 450 aa12.83□□□□□ -0.36
CYB561A3-215ENST00000540317 IGKV6-21A0A0C4DH24 114 aa12.82□□□□□ -0.36
CYB561A3-215ENST00000540317 DDX3XO00571 662 aaKnown RBP eCLIP12.82□□□□□ -0.362e-7■■■□□ 19
CYB561A3-215ENST00000540317 ATP8B1O43520 1251 aa12.82□□□□□ -0.36
CYB561A3-215ENST00000540317 ERVK-21P61565 698 aa12.82□□□□□ -0.36
CYB561A3-215ENST00000540317 TFDP1Q14186 410 aa12.82□□□□□ -0.36
CYB561A3-215ENST00000540317 ARHGAP44Q17R89 818 aa12.82□□□□□ -0.36
CYB561A3-215ENST00000540317 CCDC70Q6NSX1 233 aa12.82□□□□□ -0.36
CYB561A3-215ENST00000540317 EFCAB12Q6NXP0 572 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms