RNA–Protein interactions for RNA: ENST00000539952.5

CPSF7-219, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 5

Gene CPSF7, Length 953 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-219ENST00000539952 MAP4K3Q8IVH8 894 aa6.57□□□□□ -1.36
CPSF7-219ENST00000539952 NPAS3Q8IXF0 933 aa6.57□□□□□ -1.36
CPSF7-219ENST00000539952 SLC7A14Q8TBB6 771 aa6.57□□□□□ -1.36
CPSF7-219ENST00000539952 E2F7Q96AV8 911 aa6.57□□□□□ -1.36
CPSF7-219ENST00000539952 MSANTD3Q96H12 275 aa6.57□□□□□ -1.36
CPSF7-219ENST00000539952 MTRQ99707 1265 aa6.57□□□□□ -1.36
CPSF7-219ENST00000539952 APOL6Q9BWW8 343 aa6.57□□□□□ -1.36
CPSF7-219ENST00000539952 RNF26Q9BY78 433 aaPredicted RBP6.57□□□□□ -1.36
CPSF7-219ENST00000539952 NFKBIZQ9BYH8 718 aa6.57□□□□□ -1.36
CPSF7-219ENST00000539952 PLA2G2FQ9BZM2 168 aa6.57□□□□□ -1.36
CPSF7-219ENST00000539952 GPR88Q9GZN0 384 aa6.57□□□□□ -1.36
CPSF7-219ENST00000539952 ZSWIM4Q9H7M6 989 aa6.57□□□□□ -1.36
CPSF7-219ENST00000539952 ZNF334Q9HCZ1 680 aaPredicted RBP6.57□□□□□ -1.36
CPSF7-219ENST00000539952 SPTLC3Q9NUV7 552 aa6.57□□□□□ -1.36
CPSF7-219ENST00000539952 RABGEF1Q9UJ41 708 aa6.57□□□□□ -1.36
CPSF7-219ENST00000539952 NAP1L2Q9ULW6 460 aaPredicted RBP6.57□□□□□ -1.36
CPSF7-219ENST00000539952 SMC3Q9UQE7 1217 aa6.57□□□□□ -1.36
CPSF7-219ENST00000539952 HES2Q9Y543 173 aa6.57□□□□□ -1.36
CPSF7-219ENST00000539952 BACE2Q9Y5Z0 518 aa6.57□□□□□ -1.36
CPSF7-219ENST00000539952 WDR87Q6ZQQ6 2873 aa6.57□□□□□ -1.36
CPSF7-219ENST00000539952 CNOT1A5YKK6 2376 aaKnown RBP6.57□□□□□ -1.36
CPSF7-219ENST00000539952 MAP1BP46821 2468 aaKnown RBP6.56□□□□□ -1.36
CPSF7-219ENST00000539952 DMDP11532 3685 aa6.56□□□□□ -1.36
CPSF7-219ENST00000539952 SHISA7A6NL88 538 aa6.56□□□□□ -1.36
CPSF7-219ENST00000539952 ZNF263O14978 683 aa6.56□□□□□ -1.36
CPSF7-219ENST00000539952 ADAMTS3O15072 1205 aa6.56□□□□□ -1.36
CPSF7-219ENST00000539952 STX6O43752 255 aa6.56□□□□□ -1.36
CPSF7-219ENST00000539952 MARCH6O60337 910 aa6.56□□□□□ -1.36
CPSF7-219ENST00000539952 GDF9O60383 454 aa6.56□□□□□ -1.36
CPSF7-219ENST00000539952 LRG1P02750 347 aa6.56□□□□□ -1.36
CPSF7-219ENST00000539952 RHOP08100 348 aa6.56□□□□□ -1.36
CPSF7-219ENST00000539952 CCDC192P0DO97 292 aa6.56□□□□□ -1.36
CPSF7-219ENST00000539952 CHRNB1P11230 501 aa6.56□□□□□ -1.36
CPSF7-219ENST00000539952 CD46P15529 392 aa6.56□□□□□ -1.36
CPSF7-219ENST00000539952 ARF4P18085 180 aaPredicted RBP6.56□□□□□ -1.36
CPSF7-219ENST00000539952 PSMA5P28066 241 aa6.56□□□□□ -1.36
CPSF7-219ENST00000539952 YWHABP31946 246 aaKnown RBP6.56□□□□□ -1.36
CPSF7-219ENST00000539952 FAM193AP78312 1265 aa6.56□□□□□ -1.36
CPSF7-219ENST00000539952 PPP2R5CQ13362 524 aa6.56□□□□□ -1.36
CPSF7-219ENST00000539952 PKP1Q13835 747 aa6.56□□□□□ -1.36
CPSF7-219ENST00000539952 LRRC32Q14392 662 aa6.56□□□□□ -1.36
CPSF7-219ENST00000539952 ANKRD1Q15327 319 aa6.56□□□□□ -1.36
CPSF7-219ENST00000539952 AASDHQ4L235 1098 aaPredicted RBP6.56□□□□□ -1.36
CPSF7-219ENST00000539952 XKR9Q5GH70 373 aa6.56□□□□□ -1.36
CPSF7-219ENST00000539952 CYP4A22Q5TCH4 519 aa6.56□□□□□ -1.36
CPSF7-219ENST00000539952 PLA2G4FQ68DD2 849 aa6.56□□□□□ -1.36
CPSF7-219ENST00000539952 IQCEQ6IPM2 695 aa6.56□□□□□ -1.36
CPSF7-219ENST00000539952 GALNT17Q6IS24 598 aa6.56□□□□□ -1.36
CPSF7-219ENST00000539952 ANKS3Q6ZW76 656 aa6.56□□□□□ -1.36
CPSF7-219ENST00000539952 CEP68Q76N32 757 aa6.56□□□□□ -1.36
CPSF7-219ENST00000539952 MFSD6LQ8IWD5 586 aa6.56□□□□□ -1.36
CPSF7-219ENST00000539952 FAM177A1Q8N128 213 aaPredicted RBP6.56□□□□□ -1.36
CPSF7-219ENST00000539952 SYNPOQ8N3V7 929 aa6.56□□□□□ -1.36
CPSF7-219ENST00000539952 FBXL16Q8N461 479 aa6.56□□□□□ -1.36
CPSF7-219ENST00000539952 C12orf50Q8NA57 414 aaPredicted RBP6.56□□□□□ -1.36
CPSF7-219ENST00000539952 KDF1Q8NAX2 398 aaPredicted RBP6.56□□□□□ -1.36
CPSF7-219ENST00000539952 ZNF461Q8TAF7 563 aa6.56□□□□□ -1.36
CPSF7-219ENST00000539952 DEPDC1BQ8WUY9 529 aa6.56□□□□□ -1.36
CPSF7-219ENST00000539952 GJA10Q969M2 543 aa6.56□□□□□ -1.36
CPSF7-219ENST00000539952 CPB2Q96IY4 423 aa6.56□□□□□ -1.36
CPSF7-219ENST00000539952 NAP1L4Q99733 375 aaKnown RBP6.56□□□□□ -1.36
CPSF7-219ENST00000539952 SLC4A5Q9BY07 1137 aa6.56□□□□□ -1.36
CPSF7-219ENST00000539952 C8orf33Q9H7E9 229 aaPredicted RBP6.56□□□□□ -1.36
CPSF7-219ENST00000539952 MAFFQ9ULX9 164 aa6.56□□□□□ -1.36
CPSF7-219ENST00000539952 PCDHA4Q9UN74 947 aa6.56□□□□□ -1.36
CPSF7-219ENST00000539952 KIF3AQ9Y496 699 aa6.56□□□□□ -1.36
CPSF7-219ENST00000539952 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP6.56□□□□□ -1.36
CPSF7-219ENST00000539952 DOCK6Q96HP0 2047 aa6.55□□□□□ -1.36
CPSF7-219ENST00000539952 MIA3Q5JRA6 1907 aa6.55□□□□□ -1.36
CPSF7-219ENST00000539952 CCDC163A0A0D9SF12 145 aa6.55□□□□□ -1.36
CPSF7-219ENST00000539952 ARHGEF37A1IGU5 675 aa6.55□□□□□ -1.36
CPSF7-219ENST00000539952 CHURC1-FNTBB4DL54 471 aa6.55□□□□□ -1.36
CPSF7-219ENST00000539952 EML1O00423 815 aa6.55□□□□□ -1.36
CPSF7-219ENST00000539952 TBX3O15119 743 aa6.55□□□□□ -1.36
CPSF7-219ENST00000539952 NEMFO60524 1076 aa6.55□□□□□ -1.36
CPSF7-219ENST00000539952 DGAT1O75907 488 aa6.55□□□□□ -1.36
CPSF7-219ENST00000539952 ABLIM3O94929 683 aa6.55□□□□□ -1.36
CPSF7-219ENST00000539952 KIF20AO95235 890 aa6.55□□□□□ -1.36
CPSF7-219ENST00000539952 KCNK5O95279 499 aa6.55□□□□□ -1.36
CPSF7-219ENST00000539952 NPTXRO95502 500 aa6.55□□□□□ -1.36
CPSF7-219ENST00000539952 ADCY5O95622 1261 aa6.55□□□□□ -1.36
CPSF7-219ENST00000539952 F13A1P00488 732 aa6.55□□□□□ -1.36
CPSF7-219ENST00000539952 ATF2P15336 505 aa6.55□□□□□ -1.36
CPSF7-219ENST00000539952 IFNAR1P17181 557 aa6.55□□□□□ -1.36
CPSF7-219ENST00000539952 FGFR3P22607 806 aa6.55□□□□□ -1.36
CPSF7-219ENST00000539952 CCNE1P24864 410 aa6.55□□□□□ -1.36
CPSF7-219ENST00000539952 GDI1P31150 447 aa6.55□□□□□ -1.36
CPSF7-219ENST00000539952 ARL2P36404 184 aa6.55□□□□□ -1.36
CPSF7-219ENST00000539952 FNTBP49356 437 aa6.55□□□□□ -1.36
CPSF7-219ENST00000539952 SATB1Q01826 763 aa6.55□□□□□ -1.36
CPSF7-219ENST00000539952 GUCA2AQ02747 115 aa6.55□□□□□ -1.36
CPSF7-219ENST00000539952 EMC2Q15006 297 aa6.55□□□□□ -1.36
CPSF7-219ENST00000539952 FAM78AQ5JUQ0 283 aa6.55□□□□□ -1.36
CPSF7-219ENST00000539952 TAF3Q5VWG9 929 aa6.55□□□□□ -1.36
CPSF7-219ENST00000539952 PPP4R3AQ6IN85 833 aa6.55□□□□□ -1.36
CPSF7-219ENST00000539952 ADGRD1Q6QNK2 874 aa6.55□□□□□ -1.36
CPSF7-219ENST00000539952 CACNA2D4Q7Z3S7 1137 aa6.55□□□□□ -1.36
CPSF7-219ENST00000539952 ELMOD1Q8N336 334 aa6.55□□□□□ -1.36
CPSF7-219ENST00000539952 LEMD2Q8NC56 503 aa6.55□□□□□ -1.36
CPSF7-219ENST00000539952 ETNPPLQ8TBG4 499 aa6.55□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms