RNA–Protein interactions for RNA: ENST00000539921.5

SNHG1-211, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2 BASIC

Gene SNHG1, Length 1,071 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-211ENST00000539921 C7orf43Q8WVR3 580 aa6.48□□□□□ -1.37
SNHG1-211ENST00000539921 TRUB1Q8WWH5 349 aaKnown RBP6.48□□□□□ -1.37
SNHG1-211ENST00000539921 ZNF75CPQ92670 426 aaPredicted RBP6.48□□□□□ -1.37
SNHG1-211ENST00000539921 TRIM63Q969Q1 353 aa6.48□□□□□ -1.37
SNHG1-211ENST00000539921 MCUR1Q96AQ8 359 aa6.48□□□□□ -1.37
SNHG1-211ENST00000539921 PTCD3Q96EY7 689 aaKnown RBP6.48□□□□□ -1.37
SNHG1-211ENST00000539921 FAM227BQ96M60 508 aa6.48□□□□□ -1.37
SNHG1-211ENST00000539921 FSD1Q9BTV5 496 aa6.48□□□□□ -1.37
SNHG1-211ENST00000539921 CADM1Q9BY67 442 aaKnown RBP6.48□□□□□ -1.37
SNHG1-211ENST00000539921 PITPNM3Q9BZ71 974 aa6.48□□□□□ -1.37
SNHG1-211ENST00000539921 C1orf21Q9H246 121 aa6.48□□□□□ -1.37
SNHG1-211ENST00000539921 SMARCAD1Q9H4L7 1026 aa6.48□□□□□ -1.37
SNHG1-211ENST00000539921 PSTPIP2Q9H939 334 aa6.48□□□□□ -1.37
SNHG1-211ENST00000539921 MAGEF1Q9HAY2 307 aa6.48□□□□□ -1.37
SNHG1-211ENST00000539921 POLD4Q9HCU8 107 aa6.48□□□□□ -1.37
SNHG1-211ENST00000539921 SSU72Q9NP77 194 aaKnown RBP6.48□□□□□ -1.37
SNHG1-211ENST00000539921 GPR108Q9NPR9 543 aa6.48□□□□□ -1.37
SNHG1-211ENST00000539921 STRN4Q9NRL3 753 aa6.48□□□□□ -1.37
SNHG1-211ENST00000539921 RRN3Q9NYV6 651 aa6.48□□□□□ -1.37
SNHG1-211ENST00000539921 TMEM9Q9P0T7 183 aa6.48□□□□□ -1.37
SNHG1-211ENST00000539921 SUCOQ9UBS9 1254 aaKnown RBP6.48□□□□□ -1.37
SNHG1-211ENST00000539921 SEPT3Q9UH03 358 aa6.48□□□□□ -1.37
SNHG1-211ENST00000539921 SERTAD1Q9UHV2 236 aa6.48□□□□□ -1.37
SNHG1-211ENST00000539921 ACAD8Q9UKU7 415 aa6.48□□□□□ -1.37
SNHG1-211ENST00000539921 POLIQ9UNA4 740 aa6.48□□□□□ -1.37
SNHG1-211ENST00000539921 EXOC7Q9UPT5 735 aa6.48□□□□□ -1.37
SNHG1-211ENST00000539921 PCDHB6Q9Y5E3 794 aa6.48□□□□□ -1.37
SNHG1-211ENST00000539921 PCDHGB3Q9Y5G1 929 aa6.48□□□□□ -1.37
SNHG1-211ENST00000539921 SCINQ9Y6U3 715 aa6.48□□□□□ -1.37
SNHG1-211ENST00000539921 C10orf71Q711Q0 1435 aa6.48□□□□□ -1.37
SNHG1-211ENST00000539921 ADGRF5Q8IZF2 1346 aa6.48□□□□□ -1.37
SNHG1-211ENST00000539921 COL15A1P39059 1388 aa6.47□□□□□ -1.37
SNHG1-211ENST00000539921 TMEM120BA0PK00 339 aa6.47□□□□□ -1.37
SNHG1-211ENST00000539921 ZSCAN5CA6NGD5 496 aaPredicted RBP6.47□□□□□ -1.37
SNHG1-211ENST00000539921 EIF4E1BA6NMX2 242 aaKnown RBP6.47□□□□□ -1.37
SNHG1-211ENST00000539921 MIF4GDA9UHW6 222 aaKnown RBP6.47□□□□□ -1.37
SNHG1-211ENST00000539921 H0Y3Z8 333 aa6.47□□□□□ -1.37
SNHG1-211ENST00000539921 ACOX3O15254 700 aa6.47□□□□□ -1.37
SNHG1-211ENST00000539921 POLR2DO15514 142 aaKnown RBP6.47□□□□□ -1.37
SNHG1-211ENST00000539921 RNF113AO15541 343 aaKnown RBP6.47□□□□□ -1.37
SNHG1-211ENST00000539921 ITM2AO43736 263 aa6.47□□□□□ -1.37
SNHG1-211ENST00000539921 DKC1O60832 514 aaKnown RBP eCLIP6.47□□□□□ -1.371e-36■■□□□ 12.2
SNHG1-211ENST00000539921 GUCY1B2O75343 617 aa6.47□□□□□ -1.37
SNHG1-211ENST00000539921 SPAG7O75391 227 aa6.47□□□□□ -1.37
SNHG1-211ENST00000539921 ALX3O95076 343 aa6.47□□□□□ -1.37
SNHG1-211ENST00000539921 MOCS3O95396 460 aa6.47□□□□□ -1.37
SNHG1-211ENST00000539921 TGDSO95455 350 aa6.47□□□□□ -1.37
SNHG1-211ENST00000539921 TTLL1O95922 423 aa6.47□□□□□ -1.37
SNHG1-211ENST00000539921 CHEK2O96017 543 aa6.47□□□□□ -1.37
SNHG1-211ENST00000539921 NTRK1P04629 796 aa6.47□□□□□ -1.37
SNHG1-211ENST00000539921 POLR3DP05423 398 aaPredicted RBP6.47□□□□□ -1.37
SNHG1-211ENST00000539921 S100A6P06703 90 aa6.47□□□□□ -1.37
SNHG1-211ENST00000539921 INHBBP09529 407 aa6.47□□□□□ -1.37
SNHG1-211ENST00000539921 ZBTB48P10074 688 aaPredicted RBP6.47□□□□□ -1.37
SNHG1-211ENST00000539921 RARBP10826 455 aa6.47□□□□□ -1.37
SNHG1-211ENST00000539921 PCP11498 1178 aaKnown RBP6.47□□□□□ -1.37
SNHG1-211ENST00000539921 BDNFP23560 247 aa6.47□□□□□ -1.37
SNHG1-211ENST00000539921 STX2P32856 288 aa6.47□□□□□ -1.37
SNHG1-211ENST00000539921 MAN1A1P33908 653 aa6.47□□□□□ -1.37
SNHG1-211ENST00000539921 GNL1P36915 607 aaPredicted RBP6.47□□□□□ -1.37
SNHG1-211ENST00000539921 PRCPP42785 496 aa6.47□□□□□ -1.37
SNHG1-211ENST00000539921 GPD2P43304 727 aa6.47□□□□□ -1.37
SNHG1-211ENST00000539921 VCPP55072 806 aaKnown RBP6.47□□□□□ -1.37
SNHG1-211ENST00000539921 DSTNP60981 165 aa6.47□□□□□ -1.37
SNHG1-211ENST00000539921 CDK16Q00536 496 aa6.47□□□□□ -1.37
SNHG1-211ENST00000539921 TFAP4Q01664 338 aa6.47□□□□□ -1.37
SNHG1-211ENST00000539921 TAGLNQ01995 201 aaKnown RBP6.47□□□□□ -1.37
SNHG1-211ENST00000539921 KLRC3Q07444 240 aa6.47□□□□□ -1.37
SNHG1-211ENST00000539921 KCNA1Q09470 495 aa6.47□□□□□ -1.37
SNHG1-211ENST00000539921 KCNMA1Q12791 1236 aa6.47□□□□□ -1.37
SNHG1-211ENST00000539921 PTGDRQ13258 359 aa6.47□□□□□ -1.37
SNHG1-211ENST00000539921 RPS6KA1Q15418 735 aa6.47□□□□□ -1.37
SNHG1-211ENST00000539921 NFE2Q16621 373 aaPredicted RBP6.47□□□□□ -1.37
SNHG1-211ENST00000539921 MOGQ16653 247 aa6.47□□□□□ -1.37
SNHG1-211ENST00000539921 KYNUQ16719 465 aa6.47□□□□□ -1.37
SNHG1-211ENST00000539921 NADK2Q4G0N4 442 aa6.47□□□□□ -1.37
SNHG1-211ENST00000539921 TRAPPC3LQ5T215 181 aa6.47□□□□□ -1.37
SNHG1-211ENST00000539921 AGAP7PQ5VUJ5 663 aa6.47□□□□□ -1.37
SNHG1-211ENST00000539921 CGB2Q6NT52 195 aa6.47□□□□□ -1.37
SNHG1-211ENST00000539921 FAM171BQ6P995 826 aa6.47□□□□□ -1.37
SNHG1-211ENST00000539921 VSTM1Q6UX27 236 aa6.47□□□□□ -1.37
SNHG1-211ENST00000539921 TPTE2Q6XPS3 522 aa6.47□□□□□ -1.37
SNHG1-211ENST00000539921 CENPUQ71F23 418 aa6.47□□□□□ -1.37
SNHG1-211ENST00000539921 CYFIP1Q7L576 1253 aa6.47□□□□□ -1.37
SNHG1-211ENST00000539921 CLNKQ7Z7G1 428 aa6.47□□□□□ -1.37
SNHG1-211ENST00000539921 RASSF3Q86WH2 238 aa6.47□□□□□ -1.37
SNHG1-211ENST00000539921 LRRC6Q86X45 466 aa6.47□□□□□ -1.37
SNHG1-211ENST00000539921 TMPRSS6Q8IU80 811 aa6.47□□□□□ -1.37
SNHG1-211ENST00000539921 ANKMY2Q8IV38 441 aa6.47□□□□□ -1.37
SNHG1-211ENST00000539921 NOSTRINQ8IVI9 506 aa6.47□□□□□ -1.37
SNHG1-211ENST00000539921 CADM3Q8N126 398 aa6.47□□□□□ -1.37
SNHG1-211ENST00000539921 ANKRD35Q8N283 1001 aa6.47□□□□□ -1.37
SNHG1-211ENST00000539921 CCDC82Q8N4S0 544 aa6.47□□□□□ -1.37
SNHG1-211ENST00000539921 ANKRD53Q8N9V6 530 aa6.47□□□□□ -1.37
SNHG1-211ENST00000539921 RBM15BQ8NDT2 890 aaKnown RBP6.47□□□□□ -1.37
SNHG1-211ENST00000539921 SLC17A8Q8NDX2 589 aa6.47□□□□□ -1.37
SNHG1-211ENST00000539921 ZFP28Q8NHY6 868 aa6.47□□□□□ -1.37
SNHG1-211ENST00000539921 SLC2A14Q8TDB8 520 aa6.47□□□□□ -1.37
SNHG1-211ENST00000539921 SP7Q8TDD2 431 aaPredicted RBP6.47□□□□□ -1.37
SNHG1-211ENST00000539921 C10orf82Q8WW14 230 aa6.47□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms