RNA–Protein interactions for RNA: ENST00000539736.5

C12orf43-208, Transcript of chromosome 12 open reading frame 43, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene C12orf43, Length 1,033 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C12orf43-208ENST00000539736 SGSM1Q2NKQ1 1148 aa23.02■■□□□ 1.28
C12orf43-208ENST00000539736 SCARA3Q6AZY7 606 aa23.02■■□□□ 1.28
C12orf43-208ENST00000539736 YME1L1Q96TA2 773 aa23.02■■□□□ 1.28
C12orf43-208ENST00000539736 UBE2OQ9C0C9 1292 aaKnown RBP23.02■■□□□ 1.28
C12orf43-208ENST00000539736 INTS2Q9H0H0 1204 aaKnown RBP23.02■■□□□ 1.28
C12orf43-208ENST00000539736 NRDE2Q9H7Z3 1164 aa23.02■■□□□ 1.28
C12orf43-208ENST00000539736 VRTNQ9H8Y1 702 aa23.02■■□□□ 1.28
C12orf43-208ENST00000539736 PLCB1Q9NQ66 1216 aa23.02■■□□□ 1.28
C12orf43-208ENST00000539736 ASS1P00966 412 aaKnown RBP23.01■■□□□ 1.27
C12orf43-208ENST00000539736 PAX3P23760 479 aa23.01■■□□□ 1.27
C12orf43-208ENST00000539736 PNPLA4P41247 253 aa23.01■■□□□ 1.27
C12orf43-208ENST00000539736 UPP1Q16831 310 aa23.01■■□□□ 1.27
C12orf43-208ENST00000539736 WDR44Q5JSH3 913 aa23.01■■□□□ 1.27
C12orf43-208ENST00000539736 DPY19L2P1Q6NXN4 242 aa23.01■■□□□ 1.27
C12orf43-208ENST00000539736 TRIM65Q6PJ69 517 aa23.01■■□□□ 1.27
C12orf43-208ENST00000539736 TMEM130Q8N3G9 435 aa23.01■■□□□ 1.27
C12orf43-208ENST00000539736 CCDC150Q8NCX0 1101 aa23.01■■□□□ 1.27
C12orf43-208ENST00000539736 FAXDC2Q96IV6 333 aa23.01■■□□□ 1.27
C12orf43-208ENST00000539736 RNPC3Q96LT9 517 aaKnown RBP23.01■■□□□ 1.27
C12orf43-208ENST00000539736 TMEM175Q9BSA9 504 aa23.01■■□□□ 1.27
C12orf43-208ENST00000539736 XYLT2Q9H1B5 865 aa23.01■■□□□ 1.27
C12orf43-208ENST00000539736 INSL6Q9Y581 213 aa23.01■■□□□ 1.27
C12orf43-208ENST00000539736 ITIH6Q6UXX5 1313 aa23.01■■□□□ 1.27
C12orf43-208ENST00000539736 CASTOR2A6NHX0 329 aa23■■□□□ 1.27
C12orf43-208ENST00000539736 PODXLO00592 558 aa23■■□□□ 1.27
C12orf43-208ENST00000539736 CLCNKBP51801 687 aa23■■□□□ 1.27
C12orf43-208ENST00000539736 PAN2Q504Q3 1202 aaKnown RBP23■■□□□ 1.27
C12orf43-208ENST00000539736 VSTM4Q8IW00 320 aa23■■□□□ 1.27
C12orf43-208ENST00000539736 HPDLQ96IR7 371 aa23■■□□□ 1.27
C12orf43-208ENST00000539736 ZNF560Q96MR9 790 aa23■■□□□ 1.27
C12orf43-208ENST00000539736 RAD9AQ99638 391 aa23■■□□□ 1.27
C12orf43-208ENST00000539736 ZBED2Q9BTP6 218 aa23■■□□□ 1.27
C12orf43-208ENST00000539736 LSM14BQ9BX40 385 aaKnown RBP23■■□□□ 1.27
C12orf43-208ENST00000539736 IMPG2Q9BZV3 1241 aa23■■□□□ 1.27
C12orf43-208ENST00000539736 CWH43Q9H720 699 aa23■■□□□ 1.27
C12orf43-208ENST00000539736 PPEF2O14830 753 aa22.99■■□□□ 1.27
C12orf43-208ENST00000539736 B4GALT3O60512 393 aa22.99■■□□□ 1.27
C12orf43-208ENST00000539736 LRRN2O75325 713 aa22.99■■□□□ 1.27
C12orf43-208ENST00000539736 CDC25BP30305 580 aa22.99■■□□□ 1.27
C12orf43-208ENST00000539736 KLK7P49862 253 aa22.99■■□□□ 1.27
C12orf43-208ENST00000539736 MYO1EQ12965 1108 aa22.99■■□□□ 1.27
C12orf43-208ENST00000539736 BTG3Q14201 252 aaPredicted RBP22.99■■□□□ 1.27
C12orf43-208ENST00000539736 ZNF699Q32M78 642 aa22.99■■□□□ 1.27
C12orf43-208ENST00000539736 DCLRE1AQ6PJP8 1040 aa22.99■■□□□ 1.27
C12orf43-208ENST00000539736 PCMTD1Q96MG8 357 aaPredicted RBP22.99■■□□□ 1.27
C12orf43-208ENST00000539736 NT5C1BQ96P26 610 aa22.99■■□□□ 1.27
C12orf43-208ENST00000539736 PI4K2AQ9BTU6 479 aa22.99■■□□□ 1.27
C12orf43-208ENST00000539736 SIX2Q9NPC8 291 aa22.99■■□□□ 1.27
C12orf43-208ENST00000539736 DAAM1Q9Y4D1 1078 aa22.99■■□□□ 1.27
C12orf43-208ENST00000539736 CARNS1A5YM72 827 aa22.98■■□□□ 1.27
C12orf43-208ENST00000539736 TMEM189-UBE2V1I3L0A0 370 aa22.98■■□□□ 1.27
C12orf43-208ENST00000539736 ALDH2P05091 517 aa22.98■■□□□ 1.27
C12orf43-208ENST00000539736 TAF6P49848 677 aa22.98■■□□□ 1.27
C12orf43-208ENST00000539736 PTPN21Q16825 1174 aa22.98■■□□□ 1.27
C12orf43-208ENST00000539736 FIGNQ5HY92 759 aa22.98■■□□□ 1.27
C12orf43-208ENST00000539736 KLHDC7AQ5VTJ3 777 aa22.98■■□□□ 1.27
C12orf43-208ENST00000539736 SPECC1LQ69YQ0 1117 aa22.98■■□□□ 1.27
C12orf43-208ENST00000539736 ARHGAP30Q7Z6I6 1101 aaPredicted RBP22.98■■□□□ 1.27
C12orf43-208ENST00000539736 SP7Q8TDD2 431 aaPredicted RBP22.98■■□□□ 1.27
C12orf43-208ENST00000539736 PAAF1Q9BRP4 392 aa22.98■■□□□ 1.27
C12orf43-208ENST00000539736 NUP58Q9BVL2 599 aa22.98■■□□□ 1.27
C12orf43-208ENST00000539736 DNAJB4Q9UDY4 337 aa22.98■■□□□ 1.27
C12orf43-208ENST00000539736 CEP290O15078 2479 aa22.97■■□□□ 1.27
C12orf43-208ENST00000539736 TLL1O43897 1013 aa22.97■■□□□ 1.27
C12orf43-208ENST00000539736 OR1G1P47890 313 aa22.97■■□□□ 1.27
C12orf43-208ENST00000539736 LILRA4P59901 499 aa22.97■■□□□ 1.27
C12orf43-208ENST00000539736 NOP14P78316 857 aaKnown RBP22.97■■□□□ 1.27
C12orf43-208ENST00000539736 SV2CQ496J9 727 aa22.97■■□□□ 1.27
C12orf43-208ENST00000539736 PHLDB3Q6NSJ2 640 aa22.97■■□□□ 1.27
C12orf43-208ENST00000539736 NEK11Q8NG66 645 aa22.97■■□□□ 1.27
C12orf43-208ENST00000539736 IQCDQ96DY2 449 aa22.97■■□□□ 1.27
C12orf43-208ENST00000539736 FAM81BQ96LP2 452 aa22.97■■□□□ 1.27
C12orf43-208ENST00000539736 GANQ9H2C0 597 aa22.97■■□□□ 1.27
C12orf43-208ENST00000539736 APOBEC3GQ9HC16 384 aaKnown RBP22.97■■□□□ 1.27
C12orf43-208ENST00000539736 CACNG4Q9UBN1 327 aa22.97■■□□□ 1.27
C12orf43-208ENST00000539736 APEX2Q9UBZ4 518 aa22.97■■□□□ 1.27
C12orf43-208ENST00000539736 FBXL5Q9UKA1 691 aa22.97■■□□□ 1.27
C12orf43-208ENST00000539736 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP22.97■■□□□ 1.27
C12orf43-208ENST00000539736 SCN1AP35498 2009 aa22.97■■□□□ 1.27
C12orf43-208ENST00000539736 NRP1O14786 923 aa22.96■■□□□ 1.27
C12orf43-208ENST00000539736 B3GAT3O94766 335 aa22.96■■□□□ 1.27
C12orf43-208ENST00000539736 NOL4O94818 638 aa22.96■■□□□ 1.27
C12orf43-208ENST00000539736 GALTP07902 379 aa22.96■■□□□ 1.27
C12orf43-208ENST00000539736 RFX1P22670 979 aa22.96■■□□□ 1.27
C12orf43-208ENST00000539736 SLC11A1P49279 550 aa22.96■■□□□ 1.27
C12orf43-208ENST00000539736 AARSP49588 968 aaKnown RBP eCLIP22.96■■□□□ 1.27
C12orf43-208ENST00000539736 BCAR1P56945 870 aa22.96■■□□□ 1.27
C12orf43-208ENST00000539736 ZNF667Q5HYK9 610 aa22.96■■□□□ 1.27
C12orf43-208ENST00000539736 SPOPLQ6IQ16 392 aa22.96■■□□□ 1.27
C12orf43-208ENST00000539736 CD300LGQ6UXG3 332 aa22.96■■□□□ 1.27
C12orf43-208ENST00000539736 ANP32BQ92688 251 aaKnown RBP22.96■■□□□ 1.27
C12orf43-208ENST00000539736 TATDN2Q93075 761 aa22.96■■□□□ 1.27
C12orf43-208ENST00000539736 COLEC11Q9BWP8 271 aa22.96■■□□□ 1.27
C12orf43-208ENST00000539736 FAM207AQ9NSI2 230 aaPredicted RBP22.96■■□□□ 1.27
C12orf43-208ENST00000539736 GDAP2Q9NXN4 497 aa22.96■■□□□ 1.27
C12orf43-208ENST00000539736 HCSTQ9UBK5 93 aa22.96■■□□□ 1.27
C12orf43-208ENST00000539736 FAN1Q9Y2M0 1017 aa22.96■■□□□ 1.27
C12orf43-208ENST00000539736 NUB1Q9Y5A7 615 aa22.96■■□□□ 1.27
C12orf43-208ENST00000539736 MRPL42Q9Y6G3 142 aaKnown RBP22.96■■□□□ 1.27
C12orf43-208ENST00000539736 KPNA7A9QM74 516 aa22.95■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 79.7 ms