RNA–Protein interactions for RNA: ENST00000538970.5

VAMP1-206, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 1 (best)

Gene VAMP1, Length 567 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-206ENST00000538970 NOTCH4Q99466 2003 aa13.66□□□□□ -0.22
VAMP1-206ENST00000538970 TRIP11Q15643 1979 aa13.65□□□□□ -0.22
VAMP1-206ENST00000538970 DOCK6Q96HP0 2047 aa13.65□□□□□ -0.22
VAMP1-206ENST00000538970 NPHP3-ACAD11A0A0J9YXS1 232 aa13.65□□□□□ -0.22
VAMP1-206ENST00000538970 KANSL1LA0AUZ9 987 aa13.65□□□□□ -0.22
VAMP1-206ENST00000538970 H3BQV1 296 aa13.65□□□□□ -0.22
VAMP1-206ENST00000538970 CLDN3O15551 220 aa13.65□□□□□ -0.22
VAMP1-206ENST00000538970 ECI2O75521 394 aa13.65□□□□□ -0.22
VAMP1-206ENST00000538970 SEC24AO95486 1093 aa13.65□□□□□ -0.22
VAMP1-206ENST00000538970 CXCL8P10145 99 aa13.65□□□□□ -0.22
VAMP1-206ENST00000538970 CEBPBP17676 345 aa13.65□□□□□ -0.22
VAMP1-206ENST00000538970 PTPN2P17706 415 aa13.65□□□□□ -0.22
VAMP1-206ENST00000538970 ELF1P32519 619 aa13.65□□□□□ -0.22
VAMP1-206ENST00000538970 PFKPQ01813 784 aa13.65□□□□□ -0.22
VAMP1-206ENST00000538970 PRKCQQ04759 706 aa13.65□□□□□ -0.22
VAMP1-206ENST00000538970 CTXN3Q4LDR2 81 aa13.65□□□□□ -0.22
VAMP1-206ENST00000538970 SLC44A4Q53GD3 710 aa13.65□□□□□ -0.22
VAMP1-206ENST00000538970 ARSHQ5FYA8 562 aa13.65□□□□□ -0.22
VAMP1-206ENST00000538970 PRSS36Q5K4E3 855 aa13.65□□□□□ -0.22
VAMP1-206ENST00000538970 TPGS2Q68CL5 300 aa13.65□□□□□ -0.22
VAMP1-206ENST00000538970 ZNF280DQ6N043 979 aa13.65□□□□□ -0.22
VAMP1-206ENST00000538970 DDX12PQ92771 950 aa13.65□□□□□ -0.22
VAMP1-206ENST00000538970 MCRS1Q96EZ8 462 aa13.65□□□□□ -0.22
VAMP1-206ENST00000538970 CDK5RAP3Q96JB5 506 aa13.65□□□□□ -0.22
VAMP1-206ENST00000538970 TBC1D32Q96NH3 1257 aa13.65□□□□□ -0.22
VAMP1-206ENST00000538970 CYP4F11Q9HBI6 524 aa13.65□□□□□ -0.22
VAMP1-206ENST00000538970 LARSQ9P2J5 1176 aaKnown RBP13.65□□□□□ -0.22
VAMP1-206ENST00000538970 PCDHB8Q9UN66 801 aa13.65□□□□□ -0.22
VAMP1-206ENST00000538970 PDCD11Q14690 1871 aaKnown RBP13.64□□□□□ -0.23
VAMP1-206ENST00000538970 TTC26A0AVF1 554 aa13.64□□□□□ -0.23
VAMP1-206ENST00000538970 H0YCG3 227 aa13.64□□□□□ -0.23
VAMP1-206ENST00000538970 SLC26A4O43511 780 aa13.64□□□□□ -0.23
VAMP1-206ENST00000538970 FCARP24071 287 aa13.64□□□□□ -0.23
VAMP1-206ENST00000538970 LRPAP1P30533 357 aa13.64□□□□□ -0.23
VAMP1-206ENST00000538970 SPAG1Q07617 926 aa13.64□□□□□ -0.23
VAMP1-206ENST00000538970 HAUS6Q7Z4H7 955 aa13.64□□□□□ -0.23
VAMP1-206ENST00000538970 C1orf210Q8IVY1 113 aa13.64□□□□□ -0.23
VAMP1-206ENST00000538970 TMEM130Q8N3G9 435 aa13.64□□□□□ -0.23
VAMP1-206ENST00000538970 APPL2Q8NEU8 664 aa13.64□□□□□ -0.23
VAMP1-206ENST00000538970 LRRC15Q8TF66 581 aa13.64□□□□□ -0.23
VAMP1-206ENST00000538970 BICD1Q96G01 975 aa13.64□□□□□ -0.23
VAMP1-206ENST00000538970 AK8Q96MA6 479 aa13.64□□□□□ -0.23
VAMP1-206ENST00000538970 HINFPQ9BQA5 517 aa13.64□□□□□ -0.23
VAMP1-206ENST00000538970 CORO1BQ9BR76 489 aa13.64□□□□□ -0.23
VAMP1-206ENST00000538970 REEP2Q9BRK0 252 aa13.64□□□□□ -0.23
VAMP1-206ENST00000538970 PLA2G2FQ9BZM2 168 aa13.64□□□□□ -0.23
VAMP1-206ENST00000538970 SEMA4AQ9H3S1 761 aa13.64□□□□□ -0.23
VAMP1-206ENST00000538970 PLEKHA5Q9HAU0 1116 aa13.64□□□□□ -0.23
VAMP1-206ENST00000538970 AFF4Q9UHB7 1163 aaKnown RBP13.64□□□□□ -0.23
VAMP1-206ENST00000538970 ODF2LQ9ULJ1 636 aa13.64□□□□□ -0.23
VAMP1-206ENST00000538970 M0QZQ0 153 aa13.63□□□□□ -0.23
VAMP1-206ENST00000538970 NRG2O14511 850 aaPredicted RBP13.63□□□□□ -0.23
VAMP1-206ENST00000538970 FAM189A1O60320 539 aa13.63□□□□□ -0.23
VAMP1-206ENST00000538970 MICAL2O94851 1124 aa13.63□□□□□ -0.23
VAMP1-206ENST00000538970 PIGRP01833 764 aa13.63□□□□□ -0.23
VAMP1-206ENST00000538970 CLTAP09496 248 aa13.63□□□□□ -0.23
VAMP1-206ENST00000538970 SP9P0CG40 484 aa13.63□□□□□ -0.23
VAMP1-206ENST00000538970 TNFSF9P41273 254 aa13.63□□□□□ -0.23
VAMP1-206ENST00000538970 CCR2P41597 374 aa13.63□□□□□ -0.23
VAMP1-206ENST00000538970 MATR3P43243 847 aaKnown RBP eCLIP13.63□□□□□ -0.23
VAMP1-206ENST00000538970 PPP2R3AQ06190 1150 aa13.63□□□□□ -0.23
VAMP1-206ENST00000538970 ADCY1Q08828 1119 aa13.63□□□□□ -0.23
VAMP1-206ENST00000538970 UBXN2BQ14CS0 331 aa13.63□□□□□ -0.23
VAMP1-206ENST00000538970 ZBTB6Q15916 424 aa13.63□□□□□ -0.23
VAMP1-206ENST00000538970 RSPO4Q2I0M5 234 aaPredicted RBP13.63□□□□□ -0.23
VAMP1-206ENST00000538970 PDZD4Q76G19 769 aaPredicted RBP13.63□□□□□ -0.23
VAMP1-206ENST00000538970 GPBP1Q86WP2 473 aa13.63□□□□□ -0.23
VAMP1-206ENST00000538970 MAML2Q8IZL2 1156 aaPredicted RBP13.63□□□□□ -0.23
VAMP1-206ENST00000538970 ELSPBP1Q96BH3 223 aa13.63□□□□□ -0.23
VAMP1-206ENST00000538970 TCEAL4Q96EI5 215 aa13.63□□□□□ -0.23
VAMP1-206ENST00000538970 KIF12Q96FN5 646 aa13.63□□□□□ -0.23
VAMP1-206ENST00000538970 OSBPL6Q9BZF3 934 aa13.63□□□□□ -0.23
VAMP1-206ENST00000538970 LTB4R2Q9NPC1 389 aa13.63□□□□□ -0.23
VAMP1-206ENST00000538970 RALYQ9UKM9 306 aaKnown RBP13.63□□□□□ -0.23
VAMP1-206ENST00000538970 MAFFQ9ULX9 164 aa13.63□□□□□ -0.23
VAMP1-206ENST00000538970 MTF2Q9Y483 593 aaPredicted RBP13.63□□□□□ -0.23
VAMP1-206ENST00000538970 GTF3C5Q9Y5Q8 519 aaPredicted RBP13.63□□□□□ -0.23
VAMP1-206ENST00000538970 CITO14578 2027 aa13.63□□□□□ -0.23
VAMP1-206ENST00000538970 K7ENM7 598 aa13.62□□□□□ -0.23
VAMP1-206ENST00000538970 ZNF197O14709 1029 aa13.62□□□□□ -0.23
VAMP1-206ENST00000538970 HNRNPDLO14979 420 aaKnown RBP13.62□□□□□ -0.23
VAMP1-206ENST00000538970 CPB1P15086 417 aa13.62□□□□□ -0.23
VAMP1-206ENST00000538970 CYP3A5P20815 502 aa13.62□□□□□ -0.23
VAMP1-206ENST00000538970 AARSP49588 968 aaKnown RBP eCLIP13.62□□□□□ -0.23
VAMP1-206ENST00000538970 LIG4P49917 911 aa13.62□□□□□ -0.23
VAMP1-206ENST00000538970 ZNF131P52739 623 aa13.62□□□□□ -0.23
VAMP1-206ENST00000538970 TWF1Q12792 350 aa13.62□□□□□ -0.23
VAMP1-206ENST00000538970 KYAT1Q16773 422 aa13.62□□□□□ -0.23
VAMP1-206ENST00000538970 FAM78AQ5JUQ0 283 aa13.62□□□□□ -0.23
VAMP1-206ENST00000538970 ZBTB41Q5SVQ8 909 aa13.62□□□□□ -0.23
VAMP1-206ENST00000538970 TANGO2Q6ICL3 276 aa13.62□□□□□ -0.23
VAMP1-206ENST00000538970 ZC3H14Q6PJT7 736 aaKnown RBP13.62□□□□□ -0.23
VAMP1-206ENST00000538970 RNF19BQ6ZMZ0 732 aa13.62□□□□□ -0.23
VAMP1-206ENST00000538970 TPRG1Q6ZUI0 275 aa13.62□□□□□ -0.23
VAMP1-206ENST00000538970 CALML4Q96GE6 196 aa13.62□□□□□ -0.23
VAMP1-206ENST00000538970 BCO2Q9BYV7 579 aa13.62□□□□□ -0.23
VAMP1-206ENST00000538970 BLOC1S4Q9NUP1 217 aa13.62□□□□□ -0.23
VAMP1-206ENST00000538970 CEP72Q9P209 647 aa13.62□□□□□ -0.23
VAMP1-206ENST00000538970 TBX20Q9UMR3 447 aa13.62□□□□□ -0.23
VAMP1-206ENST00000538970 UBQLN1Q9UMX0 589 aaKnown RBP13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms