RNA–Protein interactions for RNA: ENST00000536717.5

TNFRSF1A-209, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 2

Gene TNFRSF1A, Length 1,503 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-209ENST00000536717 GCNT3O95395 438 aa19.41■□□□□ 0.7
TNFRSF1A-209ENST00000536717 CYP3A5P20815 502 aa19.41■□□□□ 0.7
TNFRSF1A-209ENST00000536717 OR1D2P34982 312 aa19.41■□□□□ 0.7
TNFRSF1A-209ENST00000536717 ACOT2P49753 483 aa19.41■□□□□ 0.7
TNFRSF1A-209ENST00000536717 L1TD1Q5T7N2 865 aaKnown RBP19.41■□□□□ 0.7
TNFRSF1A-209ENST00000536717 CYP26C1Q6V0L0 522 aa19.41■□□□□ 0.7
TNFRSF1A-209ENST00000536717 TDRD5Q8NAT2 981 aaKnown RBP19.41■□□□□ 0.7
TNFRSF1A-209ENST00000536717 SMG7Q92540 1137 aaKnown RBP19.41■□□□□ 0.7
TNFRSF1A-209ENST00000536717 SUSD3Q96L08 255 aa19.41■□□□□ 0.7
TNFRSF1A-209ENST00000536717 WDR6Q9NNW5 1121 aaKnown RBP19.41■□□□□ 0.7
TNFRSF1A-209ENST00000536717 AGO2Q9UKV8 859 aaKnown RBP19.41■□□□□ 0.7
TNFRSF1A-209ENST00000536717 TSC2P49815 1807 aa19.41■□□□□ 0.7
TNFRSF1A-209ENST00000536717 WDFY4Q6ZS81 3184 aa19.41■□□□□ 0.7
TNFRSF1A-209ENST00000536717 FAM237AA0A1B0GTK4 181 aa19.41■□□□□ 0.7
TNFRSF1A-209ENST00000536717 SYKP43405 635 aa19.41■□□□□ 0.7
TNFRSF1A-209ENST00000536717 GUCY2FP51841 1108 aa19.41■□□□□ 0.7
TNFRSF1A-209ENST00000536717 ZXDAP98168 799 aa19.41■□□□□ 0.7
TNFRSF1A-209ENST00000536717 PTPN21Q16825 1174 aa19.41■□□□□ 0.7
TNFRSF1A-209ENST00000536717 VARS2Q5ST30 1063 aaKnown RBP19.41■□□□□ 0.7
TNFRSF1A-209ENST00000536717 CRELD2Q6UXH1 353 aaPredicted RBP19.41■□□□□ 0.7
TNFRSF1A-209ENST00000536717 ZDHHC14Q8IZN3 488 aa19.41■□□□□ 0.7
TNFRSF1A-209ENST00000536717 PRKD2Q9BZL6 878 aa19.41■□□□□ 0.7
TNFRSF1A-209ENST00000536717 TRIM9Q9C026 710 aa19.41■□□□□ 0.7
TNFRSF1A-209ENST00000536717 HPSEQ9Y251 543 aa19.41■□□□□ 0.7
TNFRSF1A-209ENST00000536717 TBC1D4O60343 1298 aa19.4■□□□□ 0.7
TNFRSF1A-209ENST00000536717 N4BP1O75113 896 aaKnown RBP19.4■□□□□ 0.7
TNFRSF1A-209ENST00000536717 MCM4P33991 863 aa19.4■□□□□ 0.7
TNFRSF1A-209ENST00000536717 NDUFA8P51970 172 aa19.4■□□□□ 0.7
TNFRSF1A-209ENST00000536717 UBE2HP62256 183 aa19.4■□□□□ 0.7
TNFRSF1A-209ENST00000536717 MRPL58Q14197 206 aaKnown RBP19.4■□□□□ 0.7
TNFRSF1A-209ENST00000536717 JADE1Q6IE81 842 aa19.4■□□□□ 0.7
TNFRSF1A-209ENST00000536717 CD302Q8IX05 232 aa19.4■□□□□ 0.7
TNFRSF1A-209ENST00000536717 POMGNT1Q8WZA1 660 aa19.4■□□□□ 0.7
TNFRSF1A-209ENST00000536717 FAM212AQ96EL1 285 aa19.4■□□□□ 0.7
TNFRSF1A-209ENST00000536717 ACCSQ96QU6 501 aa19.4■□□□□ 0.7
TNFRSF1A-209ENST00000536717 TSPAN18Q96SJ8 248 aa19.4■□□□□ 0.7
TNFRSF1A-209ENST00000536717 PCDHB13Q9Y5F0 798 aa19.4■□□□□ 0.7
TNFRSF1A-209ENST00000536717 GTF3C5Q9Y5Q8 519 aaPredicted RBP19.4■□□□□ 0.7
TNFRSF1A-209ENST00000536717 CLUHO75153 1309 aa19.39■□□□□ 0.69
TNFRSF1A-209ENST00000536717 XPOTO43592 962 aaKnown RBP19.39■□□□□ 0.69
TNFRSF1A-209ENST00000536717 GADD45BO75293 160 aaPredicted RBP19.39■□□□□ 0.69
TNFRSF1A-209ENST00000536717 C8AP07357 584 aa19.39■□□□□ 0.69
TNFRSF1A-209ENST00000536717 NFICP08651 508 aa19.39■□□□□ 0.69
TNFRSF1A-209ENST00000536717 ALCAMQ13740 583 aa19.39■□□□□ 0.69
TNFRSF1A-209ENST00000536717 SPATA1Q5VX52 437 aa19.39■□□□□ 0.69
TNFRSF1A-209ENST00000536717 SLC8B1Q6J4K2 584 aa19.39■□□□□ 0.69
TNFRSF1A-209ENST00000536717 CCDC65Q8IXS2 484 aa19.39■□□□□ 0.69
TNFRSF1A-209ENST00000536717 PLCD3Q8N3E9 789 aa19.39■□□□□ 0.69
TNFRSF1A-209ENST00000536717 GLIS3Q8NEA6 775 aa19.39■□□□□ 0.69
TNFRSF1A-209ENST00000536717 LRRC27Q9C0I9 530 aa19.39■□□□□ 0.69
TNFRSF1A-209ENST00000536717 LIMD1Q9UGP4 676 aa19.39■□□□□ 0.69
TNFRSF1A-209ENST00000536717 USP25Q9UHP3 1055 aa19.39■□□□□ 0.69
TNFRSF1A-209ENST00000536717 EXOC7Q9UPT5 735 aa19.39■□□□□ 0.69
TNFRSF1A-209ENST00000536717 PPEF2O14830 753 aa19.38■□□□□ 0.69
TNFRSF1A-209ENST00000536717 PRPF6O94906 941 aaKnown RBP19.38■□□□□ 0.69
TNFRSF1A-209ENST00000536717 ASGR2P07307 311 aa19.38■□□□□ 0.69
TNFRSF1A-209ENST00000536717 AARSP49588 968 aaKnown RBP eCLIP19.38■□□□□ 0.69
TNFRSF1A-209ENST00000536717 ROR1Q01973 937 aa19.38■□□□□ 0.69
TNFRSF1A-209ENST00000536717 POSTNQ15063 836 aa19.38■□□□□ 0.69
TNFRSF1A-209ENST00000536717 LIN9Q5TKA1 542 aa19.38■□□□□ 0.69
TNFRSF1A-209ENST00000536717 CNNM4Q6P4Q7 775 aa19.38■□□□□ 0.69
TNFRSF1A-209ENST00000536717 TRIM67Q6ZTA4 783 aa19.38■□□□□ 0.69
TNFRSF1A-209ENST00000536717 HFE2Q6ZVN8 426 aa19.38■□□□□ 0.69
TNFRSF1A-209ENST00000536717 OTOP3Q7RTS5 596 aa19.38■□□□□ 0.69
TNFRSF1A-209ENST00000536717 CEP57L1Q8IYX8 460 aa19.38■□□□□ 0.69
TNFRSF1A-209ENST00000536717 ZSWIM2Q8NEG5 633 aa19.38■□□□□ 0.69
TNFRSF1A-209ENST00000536717 HPS3Q969F9 1004 aa19.38■□□□□ 0.69
TNFRSF1A-209ENST00000536717 ACSF2Q96CM8 615 aaPredicted RBP19.38■□□□□ 0.69
TNFRSF1A-209ENST00000536717 GOLPH3LQ9H4A5 285 aa19.38■□□□□ 0.69
TNFRSF1A-209ENST00000536717 ASB7Q9H672 318 aa19.38■□□□□ 0.69
TNFRSF1A-209ENST00000536717 MAGEF1Q9HAY2 307 aa19.38■□□□□ 0.69
TNFRSF1A-209ENST00000536717 PIDD1Q9HB75 910 aa19.38■□□□□ 0.69
TNFRSF1A-209ENST00000536717 WDR27A2RRH5 827 aa19.37■□□□□ 0.69
TNFRSF1A-209ENST00000536717 M0QZQ0 153 aa19.37■□□□□ 0.69
TNFRSF1A-209ENST00000536717 HOXA9P31269 272 aa19.37■□□□□ 0.69
TNFRSF1A-209ENST00000536717 AMPD3Q01432 767 aa19.37■□□□□ 0.69
TNFRSF1A-209ENST00000536717 POU5F1Q01860 360 aaKnown RBP19.37■□□□□ 0.69
TNFRSF1A-209ENST00000536717 TMEM132DQ14C87 1099 aa19.37■□□□□ 0.69
TNFRSF1A-209ENST00000536717 PPM1LQ5SGD2 360 aa19.37■□□□□ 0.69
TNFRSF1A-209ENST00000536717 SLC7A14Q8TBB6 771 aa19.37■□□□□ 0.69
TNFRSF1A-209ENST00000536717 C7orf25Q9BPX7 421 aa19.37■□□□□ 0.69
TNFRSF1A-209ENST00000536717 FBXL5Q9UKA1 691 aa19.37■□□□□ 0.69
TNFRSF1A-209ENST00000536717 PCDHB8Q9UN66 801 aa19.37■□□□□ 0.69
TNFRSF1A-209ENST00000536717 SORCS3Q9UPU3 1222 aa19.37■□□□□ 0.69
TNFRSF1A-209ENST00000536717 DERAQ9Y315 318 aa19.37■□□□□ 0.69
TNFRSF1A-209ENST00000536717 MUC6Q6W4X9 2439 aa19.36■□□□□ 0.69
TNFRSF1A-209ENST00000536717 ABLIM3O94929 683 aa19.36■□□□□ 0.69
TNFRSF1A-209ENST00000536717 HNRNPA1P09651 372 aaKnown RBP eCLIP19.36■□□□□ 0.69
TNFRSF1A-209ENST00000536717 CASP1P29466 404 aa19.36■□□□□ 0.69
TNFRSF1A-209ENST00000536717 ASIC1P78348 528 aa19.36■□□□□ 0.69
TNFRSF1A-209ENST00000536717 FAM160A1Q05DH4 1040 aa19.36■□□□□ 0.69
TNFRSF1A-209ENST00000536717 SIGLEC14Q08ET2 396 aa19.36■□□□□ 0.69
TNFRSF1A-209ENST00000536717 UVSSAQ2YD98 709 aa19.36■□□□□ 0.69
TNFRSF1A-209ENST00000536717 SYCP3Q8IZU3 236 aa19.36■□□□□ 0.69
TNFRSF1A-209ENST00000536717 BEST2Q8NFU1 509 aa19.36■□□□□ 0.69
TNFRSF1A-209ENST00000536717 ZNF461Q8TAF7 563 aa19.36■□□□□ 0.69
TNFRSF1A-209ENST00000536717 C2CD2Q9Y426 696 aa19.36■□□□□ 0.69
TNFRSF1A-209ENST00000536717 KMT2EQ8IZD2 1858 aa19.36■□□□□ 0.69
TNFRSF1A-209ENST00000536717 TMEM221A6NGB7 291 aa19.35■□□□□ 0.69
TNFRSF1A-209ENST00000536717 H7C4K7 107 aa19.35■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms