RNA–Protein interactions for RNA: ENST00000536708.6

CDK5RAP3-202, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 2 BASIC

Gene CDK5RAP3, Length 1,975 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-202ENST00000536708 ARRDC4Q8NCT1 418 aa13.91□□□□□ -0.18
CDK5RAP3-202ENST00000536708 TSEN34Q9BSV6 310 aaKnown RBP13.91□□□□□ -0.18
CDK5RAP3-202ENST00000536708 TCHPQ9BT92 498 aa13.91□□□□□ -0.18
CDK5RAP3-202ENST00000536708 PTPRHQ9HD43 1115 aa13.91□□□□□ -0.18
CDK5RAP3-202ENST00000536708 GDF3Q9NR23 364 aa13.91□□□□□ -0.18
CDK5RAP3-202ENST00000536708 INTUQ9ULD6 942 aa13.91□□□□□ -0.18
CDK5RAP3-202ENST00000536708 CDY2AQ9Y6F7 541 aa13.91□□□□□ -0.18
CDK5RAP3-202ENST00000536708 MYH10P35580 1976 aa13.91□□□□□ -0.18
CDK5RAP3-202ENST00000536708 CABYRO75952 493 aa13.91□□□□□ -0.18
CDK5RAP3-202ENST00000536708 ACTN1P12814 892 aa13.91□□□□□ -0.18
CDK5RAP3-202ENST00000536708 THPOP40225 353 aa13.91□□□□□ -0.18
CDK5RAP3-202ENST00000536708 CTCFP49711 727 aaPredicted RBP13.91□□□□□ -0.18
CDK5RAP3-202ENST00000536708 NAP1L1P55209 391 aaKnown RBP13.91□□□□□ -0.18
CDK5RAP3-202ENST00000536708 PTK2Q05397 1052 aa13.91□□□□□ -0.18
CDK5RAP3-202ENST00000536708 CYP24A1Q07973 514 aa13.91□□□□□ -0.18
CDK5RAP3-202ENST00000536708 PPP3CAQ08209 521 aa13.91□□□□□ -0.18
CDK5RAP3-202ENST00000536708 IFI16Q16666 785 aaKnown RBP13.91□□□□□ -0.18
CDK5RAP3-202ENST00000536708 FAM187BQ17R55 369 aa13.91□□□□□ -0.18
CDK5RAP3-202ENST00000536708 CATSPER4Q7RTX7 472 aa13.91□□□□□ -0.18
CDK5RAP3-202ENST00000536708 GPIHBP1Q8IV16 184 aa13.91□□□□□ -0.18
CDK5RAP3-202ENST00000536708 THNSL1Q8IYQ7 743 aa13.91□□□□□ -0.18
CDK5RAP3-202ENST00000536708 DIS3LQ8TF46 1054 aaKnown RBP13.91□□□□□ -0.18
CDK5RAP3-202ENST00000536708 SH3GL2Q99962 352 aa13.91□□□□□ -0.18
CDK5RAP3-202ENST00000536708 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP13.91□□□□□ -0.181e-6■□□□□ 8
CDK5RAP3-202ENST00000536708 GCOM2Q9BZD3 368 aaPredicted RBP13.91□□□□□ -0.18
CDK5RAP3-202ENST00000536708 FAM204AQ9H8W3 233 aa13.91□□□□□ -0.18
CDK5RAP3-202ENST00000536708 RBM12Q9NTZ6 932 aaKnown RBP13.91□□□□□ -0.18
CDK5RAP3-202ENST00000536708 RSPH14Q9UHP6 348 aa13.91□□□□□ -0.18
CDK5RAP3-202ENST00000536708 OGDHLQ9ULD0 1010 aa13.91□□□□□ -0.18
CDK5RAP3-202ENST00000536708 NOD1Q9Y239 953 aa13.91□□□□□ -0.18
CDK5RAP3-202ENST00000536708 DAAM1Q9Y4D1 1078 aa13.91□□□□□ -0.18
CDK5RAP3-202ENST00000536708 A0A0A6YYK5 440 aaPredicted RBP13.9□□□□□ -0.18
CDK5RAP3-202ENST00000536708 EXTL3O43909 919 aa13.9□□□□□ -0.18
CDK5RAP3-202ENST00000536708 LRRN2O75325 713 aa13.9□□□□□ -0.18
CDK5RAP3-202ENST00000536708 CHRNA1P02708 482 aa13.9□□□□□ -0.18
CDK5RAP3-202ENST00000536708 DLATP10515 647 aaKnown RBP13.9□□□□□ -0.18
CDK5RAP3-202ENST00000536708 EIF4BP23588 611 aaKnown RBP13.9□□□□□ -0.18
CDK5RAP3-202ENST00000536708 GGCXP38435 758 aa13.9□□□□□ -0.18
CDK5RAP3-202ENST00000536708 MNX1P50219 401 aaPredicted RBP13.9□□□□□ -0.18
CDK5RAP3-202ENST00000536708 VAMP7P51809 220 aa13.9□□□□□ -0.18
CDK5RAP3-202ENST00000536708 MCL1Q07820 350 aa13.9□□□□□ -0.18
CDK5RAP3-202ENST00000536708 ALS2CLQ60I27 953 aa13.9□□□□□ -0.18
CDK5RAP3-202ENST00000536708 C8orf74Q6P047 294 aa13.9□□□□□ -0.18
CDK5RAP3-202ENST00000536708 INTS8Q75QN2 995 aaKnown RBP13.9□□□□□ -0.18
CDK5RAP3-202ENST00000536708 GSPT2Q8IYD1 628 aaKnown RBP13.9□□□□□ -0.18
CDK5RAP3-202ENST00000536708 U2AF1L4Q8WU68 220 aaKnown RBP13.9□□□□□ -0.18
CDK5RAP3-202ENST00000536708 SPAG5Q96R06 1193 aa13.9□□□□□ -0.18
CDK5RAP3-202ENST00000536708 SENP6Q9GZR1 1112 aaPredicted RBP13.9□□□□□ -0.18
CDK5RAP3-202ENST00000536708 NAGPAQ9UK23 515 aa13.9□□□□□ -0.18
CDK5RAP3-202ENST00000536708 TMEM59LQ9UK28 342 aa13.9□□□□□ -0.18
CDK5RAP3-202ENST00000536708 TNFSF13BQ9Y275 285 aa13.9□□□□□ -0.18
CDK5RAP3-202ENST00000536708 MEFVO15553 781 aaPredicted RBP13.89□□□□□ -0.19
CDK5RAP3-202ENST00000536708 KRT13P13646 458 aa13.89□□□□□ -0.19
CDK5RAP3-202ENST00000536708 HOXA11P31270 313 aaPredicted RBP13.89□□□□□ -0.19
CDK5RAP3-202ENST00000536708 GCLMP48507 274 aa13.89□□□□□ -0.19
CDK5RAP3-202ENST00000536708 TRIM71Q2Q1W2 868 aaKnown RBP13.89□□□□□ -0.19
CDK5RAP3-202ENST00000536708 SLFN12LQ6IEE8 588 aa13.89□□□□□ -0.19
CDK5RAP3-202ENST00000536708 FAM228AQ86W67 206 aa13.89□□□□□ -0.19
CDK5RAP3-202ENST00000536708 IFT20Q8IY31 132 aa13.89□□□□□ -0.19
CDK5RAP3-202ENST00000536708 TMEM130Q8N3G9 435 aa13.89□□□□□ -0.19
CDK5RAP3-202ENST00000536708 EIF1ADQ8N9N8 165 aaKnown RBP13.89□□□□□ -0.19
CDK5RAP3-202ENST00000536708 PARD3BQ8TEW8 1205 aa13.89□□□□□ -0.19
CDK5RAP3-202ENST00000536708 ELMO3Q96BJ8 720 aa13.89□□□□□ -0.19
CDK5RAP3-202ENST00000536708 PSMB7Q99436 277 aa13.89□□□□□ -0.19
CDK5RAP3-202ENST00000536708 PACSIN1Q9BY11 444 aa13.89□□□□□ -0.19
CDK5RAP3-202ENST00000536708 CELF4Q9BZC1 486 aaKnown RBP13.89□□□□□ -0.19
CDK5RAP3-202ENST00000536708 RBAKQ9NYW8 714 aaPredicted RBP13.89□□□□□ -0.19
CDK5RAP3-202ENST00000536708 EHD2Q9NZN4 543 aa13.89□□□□□ -0.19
CDK5RAP3-202ENST00000536708 PCDH10Q9P2E7 1040 aa13.89□□□□□ -0.19
CDK5RAP3-202ENST00000536708 NOC2LQ9Y3T9 749 aaKnown RBP13.89□□□□□ -0.19
CDK5RAP3-202ENST00000536708 TET1Q8NFU7 2136 aa13.89□□□□□ -0.19
CDK5RAP3-202ENST00000536708 GOLGA6BA6NDN3 693 aa13.89□□□□□ -0.19
CDK5RAP3-202ENST00000536708 PHACTR2O75167 634 aa13.89□□□□□ -0.19
CDK5RAP3-202ENST00000536708 FMO5P49326 533 aa13.89□□□□□ -0.19
CDK5RAP3-202ENST00000536708 ATN1P54259 1190 aaPredicted RBP13.89□□□□□ -0.19
CDK5RAP3-202ENST00000536708 ARID5AQ03989 594 aa13.89□□□□□ -0.19
CDK5RAP3-202ENST00000536708 MGAT3Q09327 533 aa13.89□□□□□ -0.19
CDK5RAP3-202ENST00000536708 ALKBH5Q6P6C2 394 aaKnown RBP13.89□□□□□ -0.19
CDK5RAP3-202ENST00000536708 SND1Q7KZF4 910 aaKnown RBP eCLIP13.89□□□□□ -0.19
CDK5RAP3-202ENST00000536708 GOLGA6L1Q8N7Z2 621 aa13.89□□□□□ -0.19
CDK5RAP3-202ENST00000536708 LRRC57Q8N9N7 239 aa13.89□□□□□ -0.19
CDK5RAP3-202ENST00000536708 SLC43A3Q8NBI5 491 aa13.89□□□□□ -0.19
CDK5RAP3-202ENST00000536708 MS4A14Q96JA4 679 aa13.89□□□□□ -0.19
CDK5RAP3-202ENST00000536708 PBKQ96KB5 322 aa13.89□□□□□ -0.19
CDK5RAP3-202ENST00000536708 EIF2AQ9BY44 585 aaKnown RBP13.89□□□□□ -0.19
CDK5RAP3-202ENST00000536708 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.89□□□□□ -0.192e-6■■■■□ 19.4
CDK5RAP3-202ENST00000536708 SMARCAL1Q9NZC9 954 aa13.89□□□□□ -0.19
CDK5RAP3-202ENST00000536708 GCNT4Q9P109 453 aa13.89□□□□□ -0.19
CDK5RAP3-202ENST00000536708 PIN4Q9Y237 131 aaKnown RBP13.89□□□□□ -0.19
CDK5RAP3-202ENST00000536708 TRPV2Q9Y5S1 764 aa13.89□□□□□ -0.19
CDK5RAP3-202ENST00000536708 ZNF233A6NK53 670 aa13.88□□□□□ -0.19
CDK5RAP3-202ENST00000536708 OGTO15294 1046 aa13.88□□□□□ -0.19
CDK5RAP3-202ENST00000536708 FTCDO95954 541 aa13.88□□□□□ -0.19
CDK5RAP3-202ENST00000536708 CXCL8P10145 99 aa13.88□□□□□ -0.19
CDK5RAP3-202ENST00000536708 FERP16591 822 aa13.88□□□□□ -0.19
CDK5RAP3-202ENST00000536708 CRYBB1P53674 252 aaPredicted RBP13.88□□□□□ -0.19
CDK5RAP3-202ENST00000536708 MYL7Q01449 175 aa13.88□□□□□ -0.19
CDK5RAP3-202ENST00000536708 SLC7A5Q01650 507 aa13.88□□□□□ -0.19
CDK5RAP3-202ENST00000536708 SCARA3Q6AZY7 606 aa13.88□□□□□ -0.19
CDK5RAP3-202ENST00000536708 FOXR1Q6PIV2 292 aa13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms