RNA–Protein interactions for RNA: ENST00000536218.5

LIG1-203, Transcript of DNA ligase 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LIG1, Length 3,179 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-203ENST00000536218 SCG3Q8WXD2 468 aaKnown RBP14.85□□□□□ -0.03
LIG1-203ENST00000536218 FAM136AQ96C01 138 aa14.85□□□□□ -0.03
LIG1-203ENST00000536218 ZNF333Q96JL9 665 aa14.85□□□□□ -0.03
LIG1-203ENST00000536218 FIZ1Q96SL8 496 aa14.85□□□□□ -0.03
LIG1-203ENST00000536218 GANQ9H2C0 597 aa14.85□□□□□ -0.03
LIG1-203ENST00000536218 SEMA4AQ9H3S1 761 aa14.85□□□□□ -0.03
LIG1-203ENST00000536218 BZW2Q9Y6E2 419 aaKnown RBP14.85□□□□□ -0.03
LIG1-203ENST00000536218 FRMPD4Q14CM0 1322 aa14.85□□□□□ -0.03
LIG1-203ENST00000536218 ZMYM2Q9UBW7 1377 aa14.85□□□□□ -0.03
LIG1-203ENST00000536218 TMEM120BA0PK00 339 aa14.85□□□□□ -0.03
LIG1-203ENST00000536218 RASGRF2O14827 1237 aa14.85□□□□□ -0.03
LIG1-203ENST00000536218 EXOC3O60645 756 aa14.85□□□□□ -0.03
LIG1-203ENST00000536218 PSMC2P35998 433 aaKnown RBP14.85□□□□□ -0.03
LIG1-203ENST00000536218 SFSWAPQ12872 951 aaKnown RBP14.85□□□□□ -0.03
LIG1-203ENST00000536218 BMT2Q1RMZ1 405 aa14.85□□□□□ -0.03
LIG1-203ENST00000536218 SNX30Q5VWJ9 437 aa14.85□□□□□ -0.03
LIG1-203ENST00000536218 ZC3H3Q8IXZ2 948 aaKnown RBP14.85□□□□□ -0.03
LIG1-203ENST00000536218 GLG1Q92896 1179 aa14.85□□□□□ -0.03
LIG1-203ENST00000536218 HIC2Q96JB3 615 aa14.85□□□□□ -0.03
LIG1-203ENST00000536218 MAF1Q9H063 256 aa14.85□□□□□ -0.03
LIG1-203ENST00000536218 MYLK2Q9H1R3 596 aa14.85□□□□□ -0.03
LIG1-203ENST00000536218 STOML1Q9UBI4 398 aa14.85□□□□□ -0.03
LIG1-203ENST00000536218 SSU72P8A0A1W2PR75 194 aa14.84□□□□□ -0.03
LIG1-203ENST00000536218 RBM47A0AV96 593 aaKnown RBP14.84□□□□□ -0.03
LIG1-203ENST00000536218 SPATA31D3P0C874 917 aa14.84□□□□□ -0.03
LIG1-203ENST00000536218 VHLP40337 213 aa14.84□□□□□ -0.03
LIG1-203ENST00000536218 INHBCP55103 352 aa14.84□□□□□ -0.03
LIG1-203ENST00000536218 MGAT5Q09328 741 aa14.84□□□□□ -0.03
LIG1-203ENST00000536218 SPATA31D4Q6ZUB0 917 aa14.84□□□□□ -0.03
LIG1-203ENST00000536218 ARMCX6Q7L4S7 300 aa14.84□□□□□ -0.03
LIG1-203ENST00000536218 PEX26Q7Z412 305 aa14.84□□□□□ -0.03
LIG1-203ENST00000536218 ECHDC2Q86YB7 292 aa14.84□□□□□ -0.03
LIG1-203ENST00000536218 EDEM3Q9BZQ6 932 aa14.84□□□□□ -0.03
LIG1-203ENST00000536218 DENND2DQ9H6A0 471 aaPredicted RBP14.84□□□□□ -0.03
LIG1-203ENST00000536218 METTL14Q9HCE5 456 aaKnown RBP14.84□□□□□ -0.03
LIG1-203ENST00000536218 PXMP2Q9NR77 195 aa14.84□□□□□ -0.03
LIG1-203ENST00000536218 SLTMQ9NWH9 1034 aaKnown RBP eCLIP14.84□□□□□ -0.03
LIG1-203ENST00000536218 AJAP1Q9UKB5 411 aaPredicted RBP14.84□□□□□ -0.03
LIG1-203ENST00000536218 ZNF510Q9Y2H8 683 aa14.84□□□□□ -0.03
LIG1-203ENST00000536218 RPTORQ8N122 1335 aa14.84□□□□□ -0.03
LIG1-203ENST00000536218 TJP3O95049 919 aa14.84□□□□□ -0.03
LIG1-203ENST00000536218 GJB6O95452 261 aa14.84□□□□□ -0.03
LIG1-203ENST00000536218 CCNB1P14635 433 aa14.84□□□□□ -0.03
LIG1-203ENST00000536218 P3H1Q32P28 736 aa14.84□□□□□ -0.03
LIG1-203ENST00000536218 XKR9Q5GH70 373 aa14.84□□□□□ -0.03
LIG1-203ENST00000536218 OLFML2BQ68BL8 750 aa14.84□□□□□ -0.03
LIG1-203ENST00000536218 PTPRN2Q92932 1015 aa14.84□□□□□ -0.03
LIG1-203ENST00000536218 ARHGEF2Q92974 986 aaKnown RBP14.84□□□□□ -0.03
LIG1-203ENST00000536218 TGS1Q96RS0 853 aaKnown RBP14.84□□□□□ -0.03
LIG1-203ENST00000536218 TBC1D10AQ9BXI6 508 aa14.84□□□□□ -0.03
LIG1-203ENST00000536218 CCDC134Q9H6E4 229 aa14.84□□□□□ -0.03
LIG1-203ENST00000536218 AGPAT3Q9NRZ7 376 aa14.84□□□□□ -0.03
LIG1-203ENST00000536218 ETNK2Q9NVF9 386 aa14.84□□□□□ -0.03
LIG1-203ENST00000536218 FRMD4BQ9Y2L6 1034 aa14.84□□□□□ -0.03
LIG1-203ENST00000536218 TELO2Q9Y4R8 837 aa14.84□□□□□ -0.03
LIG1-203ENST00000536218 O00370 1275 aa14.83□□□□□ -0.03
LIG1-203ENST00000536218 YWHABP31946 246 aaKnown RBP14.83□□□□□ -0.03
LIG1-203ENST00000536218 RARRES1P49788 294 aa14.83□□□□□ -0.03
LIG1-203ENST00000536218 SOX10P56693 466 aa14.83□□□□□ -0.03
LIG1-203ENST00000536218 MAPK7Q13164 816 aa14.83□□□□□ -0.03
LIG1-203ENST00000536218 MFSD4BQ5TF39 518 aa14.83□□□□□ -0.03
LIG1-203ENST00000536218 ACTRT1Q8TDG2 376 aa14.83□□□□□ -0.03
LIG1-203ENST00000536218 EPB41L4BQ9H329 900 aa14.83□□□□□ -0.03
LIG1-203ENST00000536218 AS3MTQ9HBK9 375 aa14.83□□□□□ -0.03
LIG1-203ENST00000536218 TMCO1Q9UM00 188 aa14.83□□□□□ -0.03
LIG1-203ENST00000536218 MAGEA13PA6NCF6 341 aa14.83□□□□□ -0.04
LIG1-203ENST00000536218 CCDC188H7C350 402 aa14.83□□□□□ -0.04
LIG1-203ENST00000536218 PDLIM1O00151 329 aa14.83□□□□□ -0.04
LIG1-203ENST00000536218 CCNE2O96020 404 aa14.83□□□□□ -0.04
LIG1-203ENST00000536218 GH1P01241 217 aa14.83□□□□□ -0.04
LIG1-203ENST00000536218 FGGP02679 453 aa14.83□□□□□ -0.04
LIG1-203ENST00000536218 BCRP11274 1271 aa14.83□□□□□ -0.04
LIG1-203ENST00000536218 HIRAP54198 1017 aaPredicted RBP14.83□□□□□ -0.04
LIG1-203ENST00000536218 PEX3P56589 373 aa14.83□□□□□ -0.04
LIG1-203ENST00000536218 PTK2Q05397 1052 aa14.83□□□□□ -0.04
LIG1-203ENST00000536218 RCN1Q15293 331 aa14.83□□□□□ -0.04
LIG1-203ENST00000536218 FAM102BQ5T8I3 360 aa14.83□□□□□ -0.04
LIG1-203ENST00000536218 STXBP4Q6ZWJ1 553 aa14.83□□□□□ -0.04
LIG1-203ENST00000536218 RNF168Q8IYW5 571 aaPredicted RBP14.83□□□□□ -0.04
LIG1-203ENST00000536218 AGGF1Q8N302 714 aaeCLIP14.83□□□□□ -0.04
LIG1-203ENST00000536218 FBXO25Q8TCJ0 367 aa14.83□□□□□ -0.04
LIG1-203ENST00000536218 LARSQ9P2J5 1176 aaKnown RBP14.83□□□□□ -0.04
LIG1-203ENST00000536218 NR2E1Q9Y466 385 aa14.83□□□□□ -0.04
LIG1-203ENST00000536218 EIF3DO15371 548 aaKnown RBP eCLIP14.83□□□□□ -0.04
LIG1-203ENST00000536218 HNRNPCP07910 306 aaKnown RBP eCLIP14.83□□□□□ -0.04
LIG1-203ENST00000536218 NR3C2P08235 984 aa14.83□□□□□ -0.04
LIG1-203ENST00000536218 STX2P32856 288 aa14.83□□□□□ -0.04
LIG1-203ENST00000536218 KIFC3Q9BVG8 833 aa14.83□□□□□ -0.04
LIG1-203ENST00000536218 STMN4Q9H169 189 aaPredicted RBP14.83□□□□□ -0.04
LIG1-203ENST00000536218 SLITRK6Q9H5Y7 841 aa14.83□□□□□ -0.04
LIG1-203ENST00000536218 SLC16A4O15374 487 aa14.82□□□□□ -0.04
LIG1-203ENST00000536218 TMEM132BQ14DG7 1078 aa14.82□□□□□ -0.04
LIG1-203ENST00000536218 LONRF1Q17RB8 773 aa14.82□□□□□ -0.04
LIG1-203ENST00000536218 KHDC1Q4VXA5 237 aaKnown RBP14.82□□□□□ -0.04
LIG1-203ENST00000536218 EXOC3L1Q86VI1 746 aa14.82□□□□□ -0.04
LIG1-203ENST00000536218 ZSWIM2Q8NEG5 633 aa14.82□□□□□ -0.04
LIG1-203ENST00000536218 RBM46Q8TBY0 533 aaKnown RBP14.82□□□□□ -0.04
LIG1-203ENST00000536218 TBC1D22BQ9NU19 505 aa14.82□□□□□ -0.04
LIG1-203ENST00000536218 DAAM1Q9Y4D1 1078 aa14.82□□□□□ -0.04
LIG1-203ENST00000536218 TPD52L2O43399 206 aaKnown RBP14.82□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms