RNA–Protein interactions for RNA: ENST00000534389.2

CSDE1-216, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 601 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-216ENST00000534389 GLDCP23378 1020 aa3.51□□□□□ -1.85
CSDE1-216ENST00000534389 MC4RP32245 332 aa3.51□□□□□ -1.85
CSDE1-216ENST00000534389 PEX19P40855 299 aa3.51□□□□□ -1.85
CSDE1-216ENST00000534389 TXKP42681 527 aa3.51□□□□□ -1.85
CSDE1-216ENST00000534389 ECE1P42892 770 aa3.51□□□□□ -1.85
CSDE1-216ENST00000534389 RANBP1P43487 201 aa3.51□□□□□ -1.85
CSDE1-216ENST00000534389 GCLCP48506 637 aaPredicted RBP3.51□□□□□ -1.85
CSDE1-216ENST00000534389 CD151P48509 253 aa3.51□□□□□ -1.85
CSDE1-216ENST00000534389 AMPHP49418 695 aa3.51□□□□□ -1.85
CSDE1-216ENST00000534389 TUBP50607 506 aa3.51□□□□□ -1.85
CSDE1-216ENST00000534389 SCAND1P57086 179 aa3.51□□□□□ -1.85
CSDE1-216ENST00000534389 ELF3P78545 371 aaPredicted RBP3.51□□□□□ -1.85
CSDE1-216ENST00000534389 BLMHQ13867 455 aa3.51□□□□□ -1.85
CSDE1-216ENST00000534389 TOB2Q14106 344 aaPredicted RBP3.51□□□□□ -1.85
CSDE1-216ENST00000534389 ACAP2Q15057 778 aa3.51□□□□□ -1.85
CSDE1-216ENST00000534389 PLCB4Q15147 1175 aa3.51□□□□□ -1.85
CSDE1-216ENST00000534389 PDCD2Q16342 344 aaPredicted RBP3.51□□□□□ -1.85
CSDE1-216ENST00000534389 CR1LQ2VPA4 569 aa3.51□□□□□ -1.85
CSDE1-216ENST00000534389 FILIP1LQ4L180 1135 aa3.51□□□□□ -1.85
CSDE1-216ENST00000534389 HSP90B2PQ58FF3 399 aa3.51□□□□□ -1.85
CSDE1-216ENST00000534389 CCDC181Q5TID7 509 aa3.51□□□□□ -1.85
CSDE1-216ENST00000534389 NAA35Q5VZE5 725 aa3.51□□□□□ -1.85
CSDE1-216ENST00000534389 ATL3Q6DD88 541 aa3.51□□□□□ -1.85
CSDE1-216ENST00000534389 CAPRIN2Q6IMN6 1127 aaKnown RBP3.51□□□□□ -1.85
CSDE1-216ENST00000534389 FSTL4Q6MZW2 842 aa3.51□□□□□ -1.85
CSDE1-216ENST00000534389 CCNI2Q6ZMN8 369 aaPredicted RBP3.51□□□□□ -1.85
CSDE1-216ENST00000534389 B4GALNT4Q76KP1 1039 aa3.51□□□□□ -1.85
CSDE1-216ENST00000534389 NECAB2Q7Z6G3 386 aa3.51□□□□□ -1.85
CSDE1-216ENST00000534389 YTHDF3Q7Z739 585 aaKnown RBP3.51□□□□□ -1.85
CSDE1-216ENST00000534389 PNMA8AQ86V59 439 aaPredicted RBP3.51□□□□□ -1.85
CSDE1-216ENST00000534389 IGDCC3Q8IVU1 814 aa3.51□□□□□ -1.85
CSDE1-216ENST00000534389 TMEM151BQ8IW70 566 aa3.51□□□□□ -1.85
CSDE1-216ENST00000534389 MFN1Q8IWA4 741 aa3.51□□□□□ -1.85
CSDE1-216ENST00000534389 RPUSD2Q8IZ73 545 aaKnown RBP3.51□□□□□ -1.85
CSDE1-216ENST00000534389 SLC35F6Q8N357 371 aa3.51□□□□□ -1.85
CSDE1-216ENST00000534389 SH2D3CQ8N5H7 860 aa3.51□□□□□ -1.85
CSDE1-216ENST00000534389 STPG3Q8N7X2 389 aa3.51□□□□□ -1.85
CSDE1-216ENST00000534389 CEP112Q8N8E3 955 aa3.51□□□□□ -1.85
CSDE1-216ENST00000534389 FSIP1Q8NA03 581 aa3.51□□□□□ -1.85
CSDE1-216ENST00000534389 KYQ8NBH2 561 aa3.51□□□□□ -1.85
CSDE1-216ENST00000534389 RASSF8Q8NHQ8 419 aa3.51□□□□□ -1.85
CSDE1-216ENST00000534389 ZNF473Q8WTR7 871 aaKnown RBP3.51□□□□□ -1.85
CSDE1-216ENST00000534389 COG1Q8WTW3 980 aa3.51□□□□□ -1.85
CSDE1-216ENST00000534389 CCDC12Q8WUD4 166 aaPredicted RBP3.51□□□□□ -1.85
CSDE1-216ENST00000534389 NSMCE1Q8WV22 266 aa3.51□□□□□ -1.85
CSDE1-216ENST00000534389 TCP11Q8WWU5 503 aa3.51□□□□□ -1.85
CSDE1-216ENST00000534389 DLG3Q92796 817 aa3.51□□□□□ -1.85
CSDE1-216ENST00000534389 RBM17Q96I25 401 aaKnown RBP3.51□□□□□ -1.85
CSDE1-216ENST00000534389 GPATCH3Q96I76 525 aa3.51□□□□□ -1.85
CSDE1-216ENST00000534389 GDAP1L1Q96MZ0 367 aa3.51□□□□□ -1.85
CSDE1-216ENST00000534389 MED15Q96RN5 788 aa3.51□□□□□ -1.85
CSDE1-216ENST00000534389 PAIP2Q9BPZ3 127 aaKnown RBP3.51□□□□□ -1.85
CSDE1-216ENST00000534389 C11orf84Q9BUA3 381 aaPredicted RBP3.51□□□□□ -1.85
CSDE1-216ENST00000534389 CAPS2Q9BXY5 557 aa3.51□□□□□ -1.85
CSDE1-216ENST00000534389 TM6SF1Q9BZW5 370 aa3.51□□□□□ -1.85
CSDE1-216ENST00000534389 POFUT1Q9H488 388 aa3.51□□□□□ -1.85
CSDE1-216ENST00000534389 EBF2Q9HAK2 575 aa3.51□□□□□ -1.85
CSDE1-216ENST00000534389 CHCHD3Q9NX63 227 aaKnown RBP3.51□□□□□ -1.85
CSDE1-216ENST00000534389 CORO1CQ9ULV4 474 aaPredicted RBP3.51□□□□□ -1.85
CSDE1-216ENST00000534389 PLA2G2DQ9UNK4 145 aa3.51□□□□□ -1.85
CSDE1-216ENST00000534389 CD163L1Q9NR16 1453 aa3.51□□□□□ -1.85
CSDE1-216ENST00000534389 PREX1Q8TCU6 1659 aa3.51□□□□□ -1.85
CSDE1-216ENST00000534389 IQGAP3Q86VI3 1631 aa3.51□□□□□ -1.85
CSDE1-216ENST00000534389 IQGAP2Q13576 1575 aa3.51□□□□□ -1.85
CSDE1-216ENST00000534389 INO80Q9ULG1 1556 aaPredicted RBP3.51□□□□□ -1.85
CSDE1-216ENST00000534389 KDRP35968 1356 aa3.51□□□□□ -1.85
CSDE1-216ENST00000534389 AOX1Q06278 1338 aa3.5□□□□□ -1.85
CSDE1-216ENST00000534389 FANCD2Q9BXW9 1451 aa3.5□□□□□ -1.85
CSDE1-216ENST00000534389 ERICH2A1L162 156 aa3.5□□□□□ -1.85
CSDE1-216ENST00000534389 GOLGA6CA6NDK9 693 aa3.5□□□□□ -1.85
CSDE1-216ENST00000534389 GOLGA6L4A6NEF3 574 aa3.5□□□□□ -1.85
CSDE1-216ENST00000534389 H0Y858 1186 aa3.5□□□□□ -1.85
CSDE1-216ENST00000534389 ARHGAP6O43182 974 aa3.5□□□□□ -1.85
CSDE1-216ENST00000534389 ZSCAN12O43309 604 aa3.5□□□□□ -1.85
CSDE1-216ENST00000534389 KATNA1O75449 491 aa3.5□□□□□ -1.85
CSDE1-216ENST00000534389 GOLGA6DP0CG33 693 aa3.5□□□□□ -1.85
CSDE1-216ENST00000534389 APEX1P27695 318 aaKnown RBP3.5□□□□□ -1.85
CSDE1-216ENST00000534389 AOAHP28039 575 aa3.5□□□□□ -1.85
CSDE1-216ENST00000534389 SDHAP31040 664 aa3.5□□□□□ -1.85
CSDE1-216ENST00000534389 ADCY8P40145 1251 aa3.5□□□□□ -1.85
CSDE1-216ENST00000534389 MAGEA10P43363 369 aaPredicted RBP3.5□□□□□ -1.85
CSDE1-216ENST00000534389 CDKN1CP49918 316 aaPredicted RBP3.5□□□□□ -1.85
CSDE1-216ENST00000534389 AFF3P51826 1226 aaKnown RBP3.5□□□□□ -1.85
CSDE1-216ENST00000534389 SEC24CP53992 1094 aa3.5□□□□□ -1.85
CSDE1-216ENST00000534389 ADKP55263 362 aaKnown RBP3.5□□□□□ -1.85
CSDE1-216ENST00000534389 ITGA1P56199 1179 aa3.5□□□□□ -1.85
CSDE1-216ENST00000534389 APBA1Q02410 837 aa3.5□□□□□ -1.85
CSDE1-216ENST00000534389 CEBPZQ03701 1054 aaKnown RBP3.5□□□□□ -1.85
CSDE1-216ENST00000534389 MYO1EQ12965 1108 aa3.5□□□□□ -1.85
CSDE1-216ENST00000534389 IFT88Q13099 833 aa3.5□□□□□ -1.85
CSDE1-216ENST00000534389 XRCC4Q13426 336 aa3.5□□□□□ -1.85
CSDE1-216ENST00000534389 LAMB3Q13751 1172 aa3.5□□□□□ -1.85
CSDE1-216ENST00000534389 NECTIN1Q15223 517 aa3.5□□□□□ -1.85
CSDE1-216ENST00000534389 EPHA7Q15375 998 aa3.5□□□□□ -1.85
CSDE1-216ENST00000534389 SEC23AQ15436 765 aa3.5□□□□□ -1.85
CSDE1-216ENST00000534389 SMAD2Q15796 467 aaKnown RBP3.5□□□□□ -1.85
CSDE1-216ENST00000534389 EZH2Q15910 746 aaKnown RBP3.5□□□□□ -1.85
CSDE1-216ENST00000534389 KCNA10Q16322 511 aa3.5□□□□□ -1.85
CSDE1-216ENST00000534389 PTGISQ16647 500 aa3.5□□□□□ -1.85
CSDE1-216ENST00000534389 WHAMMP3Q1A5X7 153 aa3.5□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms