RNA–Protein interactions for RNA: ENST00000533910.5

CHKA-208, Transcript of choline kinase alpha, humanhuman

TSL 3

Gene CHKA, Length 864 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKA-208ENST00000533910 APBA2Q99767 749 aa6.3□□□□□ -1.4
CHKA-208ENST00000533910 HSD17B14Q9BPX1 270 aa6.3□□□□□ -1.4
CHKA-208ENST00000533910 ZNF577Q9BSK1 485 aa6.3□□□□□ -1.4
CHKA-208ENST00000533910 FAM126AQ9BYI3 521 aaPredicted RBP6.3□□□□□ -1.4
CHKA-208ENST00000533910 TRIM5Q9C035 493 aa6.3□□□□□ -1.4
CHKA-208ENST00000533910 MKRN2Q9H000 416 aaKnown RBP6.3□□□□□ -1.4
CHKA-208ENST00000533910 ASCC2Q9H1I8 757 aaPredicted RBP6.3□□□□□ -1.4
CHKA-208ENST00000533910 ACSS3Q9H6R3 686 aa6.3□□□□□ -1.4
CHKA-208ENST00000533910 AKTIPQ9H8T0 292 aa6.3□□□□□ -1.4
CHKA-208ENST00000533910 SPC25Q9HBM1 224 aa6.3□□□□□ -1.4
CHKA-208ENST00000533910 AGO4Q9HCK5 861 aaKnown RBP6.3□□□□□ -1.4
CHKA-208ENST00000533910 TUFT1Q9NNX1 390 aa6.3□□□□□ -1.4
CHKA-208ENST00000533910 A1CFQ9NQ94 594 aaKnown RBP6.3□□□□□ -1.4
CHKA-208ENST00000533910 KCNH7Q9NS40 1196 aa6.3□□□□□ -1.4
CHKA-208ENST00000533910 CYP39A1Q9NYL5 469 aa6.3□□□□□ -1.4
CHKA-208ENST00000533910 BTBD7Q9P203 1132 aa6.3□□□□□ -1.4
CHKA-208ENST00000533910 FBXO40Q9UH90 709 aa6.3□□□□□ -1.4
CHKA-208ENST00000533910 RWDD2AQ9UIY3 292 aa6.3□□□□□ -1.4
CHKA-208ENST00000533910 PCOLCE2Q9UKZ9 415 aa6.3□□□□□ -1.4
CHKA-208ENST00000533910 GDAQ9Y2T3 454 aa6.3□□□□□ -1.4
CHKA-208ENST00000533910 SLC45A1Q9Y2W3 748 aa6.3□□□□□ -1.4
CHKA-208ENST00000533910 NFE2L3Q9Y4A8 694 aa6.3□□□□□ -1.4
CHKA-208ENST00000533910 ZNFX1Q9P2E3 1918 aaKnown RBP6.3□□□□□ -1.4
CHKA-208ENST00000533910 ANKRD34BA5PLL1 514 aa6.29□□□□□ -1.4
CHKA-208ENST00000533910 TRAF5O00463 557 aa6.29□□□□□ -1.4
CHKA-208ENST00000533910 SHOXO15266 292 aa6.29□□□□□ -1.4
CHKA-208ENST00000533910 DHX15O43143 795 aaKnown RBP6.29□□□□□ -1.4
CHKA-208ENST00000533910 STAM2O75886 525 aa6.29□□□□□ -1.4
CHKA-208ENST00000533910 PLA2G4BP0C869 781 aa6.29□□□□□ -1.4
CHKA-208ENST00000533910 ATP1A3P13637 1013 aa6.29□□□□□ -1.4
CHKA-208ENST00000533910 CYP11B2P19099 503 aa6.29□□□□□ -1.4
CHKA-208ENST00000533910 EDNRBP24530 442 aa6.29□□□□□ -1.4
CHKA-208ENST00000533910 NOS3P29474 1203 aa6.29□□□□□ -1.4
CHKA-208ENST00000533910 CCND2P30279 289 aa6.29□□□□□ -1.4
CHKA-208ENST00000533910 SLC12A3P55017 1021 aa6.29□□□□□ -1.4
CHKA-208ENST00000533910 PPP2R2AP63151 447 aa6.29□□□□□ -1.4
CHKA-208ENST00000533910 CDK5R2Q13319 367 aa6.29□□□□□ -1.4
CHKA-208ENST00000533910 ITGB3BPQ13352 177 aaPredicted RBP6.29□□□□□ -1.4
CHKA-208ENST00000533910 SNAPC2Q13487 334 aa6.29□□□□□ -1.4
CHKA-208ENST00000533910 MTMR1Q13613 665 aa6.29□□□□□ -1.4
CHKA-208ENST00000533910 EPHA7Q15375 998 aa6.29□□□□□ -1.4
CHKA-208ENST00000533910 C4orf46Q504U0 113 aa6.29□□□□□ -1.4
CHKA-208ENST00000533910 ARHGEF16Q5VV41 709 aa6.29□□□□□ -1.4
CHKA-208ENST00000533910 ANKRD34AQ69YU3 496 aa6.29□□□□□ -1.4
CHKA-208ENST00000533910 FOXR2Q6PJQ5 311 aa6.29□□□□□ -1.4
CHKA-208ENST00000533910 TSHZ1Q6ZSZ6 1077 aa6.29□□□□□ -1.4
CHKA-208ENST00000533910 APTXQ7Z2E3 356 aaKnown RBP6.29□□□□□ -1.4
CHKA-208ENST00000533910 KIAA0895Q8NCT3 520 aa6.29□□□□□ -1.4
CHKA-208ENST00000533910 DNERQ8NFT8 737 aa6.29□□□□□ -1.4
CHKA-208ENST00000533910 NSUN6Q8TEA1 469 aaKnown RBP6.29□□□□□ -1.4
CHKA-208ENST00000533910 ZNF669Q96BR6 464 aaPredicted RBP6.29□□□□□ -1.4
CHKA-208ENST00000533910 DNAJC19Q96DA6 116 aa6.29□□□□□ -1.4
CHKA-208ENST00000533910 DHTKD1Q96HY7 919 aaPredicted RBP6.29□□□□□ -1.4
CHKA-208ENST00000533910 KREMEN1Q96MU8 473 aa6.29□□□□□ -1.4
CHKA-208ENST00000533910 CLUHP3Q96NS8 147 aa6.29□□□□□ -1.4
CHKA-208ENST00000533910 INPP4AQ96PE3 977 aaPredicted RBP6.29□□□□□ -1.4
CHKA-208ENST00000533910 PSMG3-AS1Q96PY0 264 aa6.29□□□□□ -1.4
CHKA-208ENST00000533910 EIF2AK1Q9BQI3 630 aaKnown RBP6.29□□□□□ -1.4
CHKA-208ENST00000533910 TEKT3Q9BXF9 490 aa6.29□□□□□ -1.4
CHKA-208ENST00000533910 SPATC1LQ9H0A9 340 aa6.29□□□□□ -1.4
CHKA-208ENST00000533910 KLHL25Q9H0H3 589 aa6.29□□□□□ -1.4
CHKA-208ENST00000533910 SEMA6CQ9H3T2 930 aa6.29□□□□□ -1.4
CHKA-208ENST00000533910 UNC45AQ9H3U1 944 aa6.29□□□□□ -1.4
CHKA-208ENST00000533910 PCDH12Q9NPG4 1184 aa6.29□□□□□ -1.4
CHKA-208ENST00000533910 EXOC1Q9NV70 894 aa6.29□□□□□ -1.4
CHKA-208ENST00000533910 CTNND2Q9UQB3 1225 aa6.29□□□□□ -1.4
CHKA-208ENST00000533910 MCM3APO60318 1980 aa6.29□□□□□ -1.4
CHKA-208ENST00000533910 ASTN1O14525 1302 aa6.28□□□□□ -1.4
CHKA-208ENST00000533910 MYH9P35579 1960 aaKnown RBP6.28□□□□□ -1.4
CHKA-208ENST00000533910 SIP14410 1827 aa6.28□□□□□ -1.4
CHKA-208ENST00000533910 GOLGA6L6A8MZA4 724 aa6.28□□□□□ -1.4
CHKA-208ENST00000533910 E9PMD0 336 aa6.28□□□□□ -1.4
CHKA-208ENST00000533910 PSMA7O14818 248 aa6.28□□□□□ -1.4
CHKA-208ENST00000533910 GAS2O43903 313 aaKnown RBP6.28□□□□□ -1.4
CHKA-208ENST00000533910 LEFTY1O75610 366 aa6.28□□□□□ -1.4
CHKA-208ENST00000533910 LRIG2O94898 1065 aa6.28□□□□□ -1.4
CHKA-208ENST00000533910 SLITRK3O94933 977 aa6.28□□□□□ -1.4
CHKA-208ENST00000533910 LYPLA2O95372 231 aa6.28□□□□□ -1.4
CHKA-208ENST00000533910 EYA4O95677 639 aa6.28□□□□□ -1.4
CHKA-208ENST00000533910 SLC25A27O95847 323 aa6.28□□□□□ -1.4
CHKA-208ENST00000533910 TPM3P06753 285 aa6.28□□□□□ -1.4
CHKA-208ENST00000533910 ZBTB48P10074 688 aaPredicted RBP6.28□□□□□ -1.4
CHKA-208ENST00000533910 CCNFP41002 786 aa6.28□□□□□ -1.4
CHKA-208ENST00000533910 PRCPP42785 496 aa6.28□□□□□ -1.4
CHKA-208ENST00000533910 PSMC6P62333 389 aa6.28□□□□□ -1.4
CHKA-208ENST00000533910 STK4Q13043 487 aa6.28□□□□□ -1.4
CHKA-208ENST00000533910 COASYQ13057 564 aa6.28□□□□□ -1.4
CHKA-208ENST00000533910 STIM1Q13586 685 aa6.28□□□□□ -1.4
CHKA-208ENST00000533910 SF1Q15637 639 aaKnown RBP6.28□□□□□ -1.4
CHKA-208ENST00000533910 KLHL10Q6JEL2 608 aa6.28□□□□□ -1.4
CHKA-208ENST00000533910 TTI2Q6NXR4 508 aa6.28□□□□□ -1.4
CHKA-208ENST00000533910 LETMD1Q6P1Q0 360 aa6.28□□□□□ -1.4
CHKA-208ENST00000533910 ZSCAN30Q86W11 494 aa6.28□□□□□ -1.4
CHKA-208ENST00000533910 GPBP1Q86WP2 473 aa6.28□□□□□ -1.4
CHKA-208ENST00000533910 TMEM130Q8N3G9 435 aa6.28□□□□□ -1.4
CHKA-208ENST00000533910 GUF1Q8N442 669 aaKnown RBP6.28□□□□□ -1.4
CHKA-208ENST00000533910 FAM133AQ8N9E0 248 aa6.28□□□□□ -1.4
CHKA-208ENST00000533910 SYT2Q8N9I0 419 aaPredicted RBP6.28□□□□□ -1.4
CHKA-208ENST00000533910 KCT2Q8NC54 265 aa6.28□□□□□ -1.4
CHKA-208ENST00000533910 ZSWIM2Q8NEG5 633 aa6.28□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms