RNA–Protein interactions for RNA: ENST00000532700.6

SMG1-203, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 1,259 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-203ENST00000532700 SPTLC1O15269 473 aa19.38■□□□□ 0.69
SMG1-203ENST00000532700 ABLIM3O94929 683 aa19.38■□□□□ 0.69
SMG1-203ENST00000532700 LAMP2P13473 410 aa19.38■□□□□ 0.69
SMG1-203ENST00000532700 LRPAP1P30533 357 aa19.38■□□□□ 0.69
SMG1-203ENST00000532700 RPL9P32969 192 aaKnown RBP19.38■□□□□ 0.69
SMG1-203ENST00000532700 ARPP19P56211 112 aa19.38■□□□□ 0.69
SMG1-203ENST00000532700 PPP2R3AQ06190 1150 aa19.38■□□□□ 0.69
SMG1-203ENST00000532700 E2F4Q16254 413 aa19.38■□□□□ 0.69
SMG1-203ENST00000532700 SLC5A9Q2M3M2 681 aa19.38■□□□□ 0.69
SMG1-203ENST00000532700 LIN9Q5TKA1 542 aa19.38■□□□□ 0.69
SMG1-203ENST00000532700 CWF19L1Q69YN2 538 aaKnown RBP19.38■□□□□ 0.69
SMG1-203ENST00000532700 CYP26C1Q6V0L0 522 aa19.38■□□□□ 0.69
SMG1-203ENST00000532700 ANKS3Q6ZW76 656 aa19.38■□□□□ 0.69
SMG1-203ENST00000532700 HPS3Q969F9 1004 aa19.38■□□□□ 0.69
SMG1-203ENST00000532700 ST6GALNAC4Q9H4F1 302 aa19.38■□□□□ 0.69
SMG1-203ENST00000532700 ZSCAN16Q9H4T2 348 aaPredicted RBP19.38■□□□□ 0.69
SMG1-203ENST00000532700 DPP7Q9UHL4 492 aa19.38■□□□□ 0.69
SMG1-203ENST00000532700 POLIQ9UNA4 740 aa19.38■□□□□ 0.69
SMG1-203ENST00000532700 NUB1Q9Y5A7 615 aa19.38■□□□□ 0.69
SMG1-203ENST00000532700 TRAPPC3O43617 180 aa19.37■□□□□ 0.69
SMG1-203ENST00000532700 HNRNPA1P09651 372 aaKnown RBP eCLIP19.37■□□□□ 0.69
SMG1-203ENST00000532700 OR4Q2P0C623 313 aa19.37■□□□□ 0.69
SMG1-203ENST00000532700 NPR3P17342 541 aa19.37■□□□□ 0.69
SMG1-203ENST00000532700 FSHRP23945 695 aa19.37■□□□□ 0.69
SMG1-203ENST00000532700 AVPR2P30518 371 aa19.37■□□□□ 0.69
SMG1-203ENST00000532700 AARSP49588 968 aaKnown RBP eCLIP19.37■□□□□ 0.69
SMG1-203ENST00000532700 CDR1P51861 262 aa19.37■□□□□ 0.69
SMG1-203ENST00000532700 TDGQ13569 410 aa19.37■□□□□ 0.69
SMG1-203ENST00000532700 HTR4Q13639 388 aa19.37■□□□□ 0.69
SMG1-203ENST00000532700 PDXDC1Q6P996 788 aa19.37■□□□□ 0.69
SMG1-203ENST00000532700 SHC4Q6S5L8 630 aa19.37■□□□□ 0.69
SMG1-203ENST00000532700 SUGP1Q8IWZ8 645 aaKnown RBP19.37■□□□□ 0.69
SMG1-203ENST00000532700 ING5Q8WYH8 240 aa19.37■□□□□ 0.69
SMG1-203ENST00000532700 FGF14Q92915 247 aa19.37■□□□□ 0.69
SMG1-203ENST00000532700 FAM212AQ96EL1 285 aa19.37■□□□□ 0.69
SMG1-203ENST00000532700 PLEKHA5Q9HAU0 1116 aa19.37■□□□□ 0.69
SMG1-203ENST00000532700 CCDC39Q9UFE4 941 aa19.37■□□□□ 0.69
SMG1-203ENST00000532700 KCNG1Q9UIX4 513 aa19.37■□□□□ 0.69
SMG1-203ENST00000532700 DUSP12Q9UNI6 340 aa19.37■□□□□ 0.69
SMG1-203ENST00000532700 STYXL1Q9Y6J8 313 aa19.37■□□□□ 0.69
SMG1-203ENST00000532700 TCHHQ07283 1943 aa19.37■□□□□ 0.69
SMG1-203ENST00000532700 FRMD3A2A2Y4 597 aa19.36■□□□□ 0.69
SMG1-203ENST00000532700 ANHXE9PGG2 379 aa19.36■□□□□ 0.69
SMG1-203ENST00000532700 SYN3O14994 580 aa19.36■□□□□ 0.69
SMG1-203ENST00000532700 HOXA9P31269 272 aa19.36■□□□□ 0.69
SMG1-203ENST00000532700 HOXD11P31277 338 aaPredicted RBP19.36■□□□□ 0.69
SMG1-203ENST00000532700 STAT6P42226 847 aa19.36■□□□□ 0.69
SMG1-203ENST00000532700 STK38Q15208 465 aa19.36■□□□□ 0.69
SMG1-203ENST00000532700 CTXN3Q4LDR2 81 aa19.36■□□□□ 0.69
SMG1-203ENST00000532700 ELMSAN1Q6PJG2 1045 aa19.36■□□□□ 0.69
SMG1-203ENST00000532700 PARM1Q6UWI2 310 aa19.36■□□□□ 0.69
SMG1-203ENST00000532700 SV2BQ7L1I2 683 aa19.36■□□□□ 0.69
SMG1-203ENST00000532700 EFCAB13Q8IY85 973 aa19.36■□□□□ 0.69
SMG1-203ENST00000532700 SLC44A3Q8N4M1 653 aa19.36■□□□□ 0.69
SMG1-203ENST00000532700 CRISPLD1Q9H336 500 aa19.36■□□□□ 0.69
SMG1-203ENST00000532700 RPF1Q9H9Y2 349 aaKnown RBP19.36■□□□□ 0.69
SMG1-203ENST00000532700 UBQLN1Q9UMX0 589 aaKnown RBP19.36■□□□□ 0.69
SMG1-203ENST00000532700 PCDHB8Q9UN66 801 aa19.36■□□□□ 0.69
SMG1-203ENST00000532700 NUMBLQ9Y6R0 609 aa19.36■□□□□ 0.69
SMG1-203ENST00000532700 KRBA1A5PL33 1030 aa19.35■□□□□ 0.69
SMG1-203ENST00000532700 M0QZQ0 153 aa19.35■□□□□ 0.69
SMG1-203ENST00000532700 SPTLC2O15270 562 aa19.35■□□□□ 0.69
SMG1-203ENST00000532700 PI15O43692 258 aa19.35■□□□□ 0.69
SMG1-203ENST00000532700 CFHP08603 1231 aa19.35■□□□□ 0.69
SMG1-203ENST00000532700 SPATA1Q5VX52 437 aa19.35■□□□□ 0.69
SMG1-203ENST00000532700 RNF19BQ6ZMZ0 732 aa19.35■□□□□ 0.69
SMG1-203ENST00000532700 ZNF461Q8TAF7 563 aa19.35■□□□□ 0.69
SMG1-203ENST00000532700 FGF13Q92913 245 aa19.35■□□□□ 0.69
SMG1-203ENST00000532700 TMEM209Q96SK2 561 aa19.35■□□□□ 0.69
SMG1-203ENST00000532700 DAXXQ9UER7 740 aaPredicted RBP19.35■□□□□ 0.69
SMG1-203ENST00000532700 F13A1P00488 732 aa19.34■□□□□ 0.69
SMG1-203ENST00000532700 ZSCAN22P10073 491 aaPredicted RBP19.34■□□□□ 0.69
SMG1-203ENST00000532700 IDEP14735 1019 aa19.34■□□□□ 0.69
SMG1-203ENST00000532700 CYP3A5P20815 502 aa19.34■□□□□ 0.69
SMG1-203ENST00000532700 CASP1P29466 404 aa19.34■□□□□ 0.69
SMG1-203ENST00000532700 CCR2P41597 374 aa19.34■□□□□ 0.69
SMG1-203ENST00000532700 ADALQ6DHV7 355 aa19.34■□□□□ 0.69
SMG1-203ENST00000532700 NPAS3Q8IXF0 933 aa19.34■□□□□ 0.69
SMG1-203ENST00000532700 TCEAL4Q96EI5 215 aa19.34■□□□□ 0.69
SMG1-203ENST00000532700 SAAL1Q96ER3 474 aa19.34■□□□□ 0.69
SMG1-203ENST00000532700 MRPL44Q9H9J2 332 aaKnown RBP19.34■□□□□ 0.69
SMG1-203ENST00000532700 FAM86C1Q9NVL1 165 aa19.34■□□□□ 0.69
SMG1-203ENST00000532700 IGSF9Q9P2J2 1179 aa19.34■□□□□ 0.69
SMG1-203ENST00000532700 AGO2Q9UKV8 859 aaKnown RBP19.34■□□□□ 0.69
SMG1-203ENST00000532700 ARHGEF37A1IGU5 675 aa19.33■□□□□ 0.68
SMG1-203ENST00000532700 GCNT3O95395 438 aa19.33■□□□□ 0.68
SMG1-203ENST00000532700 PDIA4P13667 645 aaKnown RBP19.33■□□□□ 0.68
SMG1-203ENST00000532700 CEBPBP17676 345 aa19.33■□□□□ 0.68
SMG1-203ENST00000532700 HOXD13P35453 343 aa19.33■□□□□ 0.68
SMG1-203ENST00000532700 TXLNAP40222 546 aa19.33■□□□□ 0.68
SMG1-203ENST00000532700 L1TD1Q5T7N2 865 aaKnown RBP19.33■□□□□ 0.68
SMG1-203ENST00000532700 C9orf57Q5W0N0 161 aa19.33■□□□□ 0.68
SMG1-203ENST00000532700 CCDC73Q6ZRK6 1079 aa19.33■□□□□ 0.68
SMG1-203ENST00000532700 SIX5Q8N196 739 aa19.33■□□□□ 0.68
SMG1-203ENST00000532700 TTC9BQ8N6N2 239 aa19.33■□□□□ 0.68
SMG1-203ENST00000532700 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP19.33■□□□□ 0.68
SMG1-203ENST00000532700 CDH7Q9ULB5 785 aa19.33■□□□□ 0.68
SMG1-203ENST00000532700 INSL5Q9Y5Q6 135 aa19.33■□□□□ 0.68
SMG1-203ENST00000532700 COL4A2P08572 1712 aa19.33■□□□□ 0.68
SMG1-203ENST00000532700 ANO9A1A5B4 782 aa19.32■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms