RNA–Protein interactions for RNA: ENST00000531041.1

SF3B2-211, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 1 (best)

Gene SF3B2, Length 1,440 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-211ENST00000531041 PBX3P40426 434 aa18.26■□□□□ 0.51
SF3B2-211ENST00000531041 RBP5P82980 135 aa18.26■□□□□ 0.51
SF3B2-211ENST00000531041 MAN2A1Q16706 1144 aa18.26■□□□□ 0.51
SF3B2-211ENST00000531041 EPC2Q52LR7 807 aa18.26■□□□□ 0.51
SF3B2-211ENST00000531041 KRT39Q6A163 491 aa18.26■□□□□ 0.51
SF3B2-211ENST00000531041 RABGGTAQ92696 567 aa18.26■□□□□ 0.51
SF3B2-211ENST00000531041 IGSF21Q96ID5 467 aa18.26■□□□□ 0.51
SF3B2-211ENST00000531041 MARCH5Q9NX47 278 aa18.26■□□□□ 0.51
SF3B2-211ENST00000531041 PRG3Q9Y2Y8 225 aaPredicted RBP18.26■□□□□ 0.51
SF3B2-211ENST00000531041 COL4A4P53420 1690 aaPredicted RBP18.26■□□□□ 0.51
SF3B2-211ENST00000531041 LRRC10BA6NIK2 292 aa18.25■□□□□ 0.51
SF3B2-211ENST00000531041 GOLGA6L19H0YKK7 550 aa18.25■□□□□ 0.51
SF3B2-211ENST00000531041 PMM2O15305 246 aa18.25■□□□□ 0.51
SF3B2-211ENST00000531041 PHACTR2O75167 634 aa18.25■□□□□ 0.51
SF3B2-211ENST00000531041 KIF4AO95239 1232 aa18.25■□□□□ 0.51
SF3B2-211ENST00000531041 CST3P01034 146 aaPredicted RBP18.25■□□□□ 0.51
SF3B2-211ENST00000531041 AFPP02771 609 aaKnown RBP18.25■□□□□ 0.51
SF3B2-211ENST00000531041 CDK11BP21127 795 aaKnown RBP18.25■□□□□ 0.51
SF3B2-211ENST00000531041 PAX3P23760 479 aa18.25■□□□□ 0.51
SF3B2-211ENST00000531041 POLR2BP30876 1174 aaKnown RBP18.25■□□□□ 0.51
SF3B2-211ENST00000531041 CTNNB1P35222 781 aa18.25■□□□□ 0.51
SF3B2-211ENST00000531041 FMO5P49326 533 aa18.25■□□□□ 0.51
SF3B2-211ENST00000531041 TSC2P49815 1807 aa18.25■□□□□ 0.51
SF3B2-211ENST00000531041 MXI1P50539 228 aa18.25■□□□□ 0.51
SF3B2-211ENST00000531041 BIRC3Q13489 604 aa18.25■□□□□ 0.51
SF3B2-211ENST00000531041 CBWD6Q4V339 395 aa18.25■□□□□ 0.51
SF3B2-211ENST00000531041 CBWD3Q5JTY5 395 aa18.25■□□□□ 0.51
SF3B2-211ENST00000531041 CBWD5Q5RIA9 395 aa18.25■□□□□ 0.51
SF3B2-211ENST00000531041 CD300LGQ6UXG3 332 aa18.25■□□□□ 0.51
SF3B2-211ENST00000531041 SPRED2Q7Z698 418 aa18.25■□□□□ 0.51
SF3B2-211ENST00000531041 TMEM173Q86WV6 379 aaPredicted RBP18.25■□□□□ 0.51
SF3B2-211ENST00000531041 LRRC52Q8N7C0 313 aa18.25■□□□□ 0.51
SF3B2-211ENST00000531041 C3orf58Q8NDZ4 430 aa18.25■□□□□ 0.51
SF3B2-211ENST00000531041 MMRN2Q9H8L6 949 aa18.25■□□□□ 0.51
SF3B2-211ENST00000531041 CHD7Q9P2D1 2997 aa18.25■□□□□ 0.51
SF3B2-211ENST00000531041 LIMA1Q9UHB6 759 aaKnown RBP18.25■□□□□ 0.51
SF3B2-211ENST00000531041 ADAM28Q9UKQ2 775 aa18.25■□□□□ 0.51
SF3B2-211ENST00000531041 AGAP1Q9UPQ3 857 aa18.25■□□□□ 0.51
SF3B2-211ENST00000531041 COQ4Q9Y3A0 265 aa18.25■□□□□ 0.51
SF3B2-211ENST00000531041 TMEM265A0A087WTH1 108 aa18.24■□□□□ 0.51
SF3B2-211ENST00000531041 F8W810 466 aa18.24■□□□□ 0.51
SF3B2-211ENST00000531041 PPEF2O14830 753 aa18.24■□□□□ 0.51
SF3B2-211ENST00000531041 P4HA2O15460 535 aa18.24■□□□□ 0.51
SF3B2-211ENST00000531041 N4BP1O75113 896 aaKnown RBP18.24■□□□□ 0.51
SF3B2-211ENST00000531041 VNN1O95497 513 aa18.24■□□□□ 0.51
SF3B2-211ENST00000531041 ITGB1P05556 798 aa18.24■□□□□ 0.51
SF3B2-211ENST00000531041 KRT19P08727 400 aa18.24■□□□□ 0.51
SF3B2-211ENST00000531041 PRKCSHP14314 528 aaPredicted RBP18.24■□□□□ 0.51
SF3B2-211ENST00000531041 PNPLA4P41247 253 aa18.24■□□□□ 0.51
SF3B2-211ENST00000531041 LILRA4P59901 499 aa18.24■□□□□ 0.51
SF3B2-211ENST00000531041 TPM4P67936 248 aa18.24■□□□□ 0.51
SF3B2-211ENST00000531041 PLCB3Q01970 1234 aa18.24■□□□□ 0.51
SF3B2-211ENST00000531041 TRPC3Q13507 836 aa18.24■□□□□ 0.51
SF3B2-211ENST00000531041 NCOA4Q13772 614 aa18.24■□□□□ 0.51
SF3B2-211ENST00000531041 KRT31Q15323 416 aa18.24■□□□□ 0.51
SF3B2-211ENST00000531041 SCARA3Q6AZY7 606 aa18.24■□□□□ 0.51
SF3B2-211ENST00000531041 ANKRD20A12PQ8NF67 263 aa18.24■□□□□ 0.51
SF3B2-211ENST00000531041 BCL7CQ8WUZ0 217 aaPredicted RBP18.24■□□□□ 0.51
SF3B2-211ENST00000531041 ZNF560Q96MR9 790 aa18.24■□□□□ 0.51
SF3B2-211ENST00000531041 R3HCC1Q9Y3T6 440 aaKnown RBP18.24■□□□□ 0.51
SF3B2-211ENST00000531041 TRANK1O15050 2925 aa18.24■□□□□ 0.51
SF3B2-211ENST00000531041 TADA2AO75478 443 aa18.23■□□□□ 0.51
SF3B2-211ENST00000531041 FGF18O76093 207 aa18.23■□□□□ 0.51
SF3B2-211ENST00000531041 EFEMP2O95967 443 aa18.23■□□□□ 0.51
SF3B2-211ENST00000531041 ATP1A3P13637 1013 aa18.23■□□□□ 0.51
SF3B2-211ENST00000531041 IGFBP6P24592 240 aaPredicted RBP18.23■□□□□ 0.51
SF3B2-211ENST00000531041 ATICP31939 592 aa18.23■□□□□ 0.51
SF3B2-211ENST00000531041 AARSP49588 968 aaKnown RBP eCLIP18.23■□□□□ 0.51
SF3B2-211ENST00000531041 TAF6P49848 677 aa18.23■□□□□ 0.51
SF3B2-211ENST00000531041 VWA3BQ502W6 1294 aa18.23■□□□□ 0.51
SF3B2-211ENST00000531041 MIIPQ5JXC2 388 aa18.23■□□□□ 0.51
SF3B2-211ENST00000531041 KLHL23Q8NBE8 558 aa18.23■□□□□ 0.51
SF3B2-211ENST00000531041 FBXL13Q8NEE6 735 aa18.23■□□□□ 0.51
SF3B2-211ENST00000531041 TMEM169Q96HH4 297 aa18.23■□□□□ 0.51
SF3B2-211ENST00000531041 C11orf84Q9BUA3 381 aaPredicted RBP18.23■□□□□ 0.51
SF3B2-211ENST00000531041 NDST4Q9H3R1 872 aa18.23■□□□□ 0.51
SF3B2-211ENST00000531041 MTUS1Q9ULD2 1270 aa18.23■□□□□ 0.51
SF3B2-211ENST00000531041 SOX1O00570 391 aaPredicted RBP18.23■□□□□ 0.51
SF3B2-211ENST00000531041 TRAPPC3O43617 180 aa18.23■□□□□ 0.51
SF3B2-211ENST00000531041 STAU1O95793 577 aaKnown RBP18.23■□□□□ 0.51
SF3B2-211ENST00000531041 HLA-DRAP01903 254 aa18.23■□□□□ 0.51
SF3B2-211ENST00000531041 PIK3CAP42336 1068 aa18.23■□□□□ 0.51
SF3B2-211ENST00000531041 MYL7Q01449 175 aa18.23■□□□□ 0.51
SF3B2-211ENST00000531041 KRT17Q04695 432 aa18.23■□□□□ 0.51
SF3B2-211ENST00000531041 MYO1EQ12965 1108 aa18.23■□□□□ 0.51
SF3B2-211ENST00000531041 SGSM1Q2NKQ1 1148 aa18.23■□□□□ 0.51
SF3B2-211ENST00000531041 SV2CQ496J9 727 aa18.23■□□□□ 0.51
SF3B2-211ENST00000531041 APTXQ7Z2E3 356 aaKnown RBP18.23■□□□□ 0.51
SF3B2-211ENST00000531041 FBXO22Q8NEZ5 403 aa18.23■□□□□ 0.51
SF3B2-211ENST00000531041 TAS1R2Q8TE23 839 aa18.23■□□□□ 0.51
SF3B2-211ENST00000531041 HASPINQ8TF76 798 aa18.23■□□□□ 0.51
SF3B2-211ENST00000531041 HPDLQ96IR7 371 aa18.23■□□□□ 0.51
SF3B2-211ENST00000531041 XYLT2Q9H1B5 865 aa18.23■□□□□ 0.51
SF3B2-211ENST00000531041 ZNF576Q9H609 170 aa18.23■□□□□ 0.51
SF3B2-211ENST00000531041 VRTNQ9H8Y1 702 aa18.23■□□□□ 0.51
SF3B2-211ENST00000531041 TAB2Q9NYJ8 693 aa18.23■□□□□ 0.51
SF3B2-211ENST00000531041 STK39Q9UEW8 545 aa18.23■□□□□ 0.51
SF3B2-211ENST00000531041 NUB1Q9Y5A7 615 aa18.23■□□□□ 0.51
SF3B2-211ENST00000531041 SF3B1O75533 1304 aaKnown RBP eCLIP18.22■□□□□ 0.51
SF3B2-211ENST00000531041 GTPBP10A4D1E9 387 aaKnown RBP18.22■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms