RNA–Protein interactions for RNA: ENST00000530906.1

PCF11-205, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

TSL 3

Gene PCF11, Length 628 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-205ENST00000530906 ANKRD62A6NC57 917 aa6□□□□□ -1.45
PCF11-205ENST00000530906 MIF4GDA9UHW6 222 aaKnown RBP6□□□□□ -1.45
PCF11-205ENST00000530906 CCDC188H7C350 402 aa6□□□□□ -1.45
PCF11-205ENST00000530906 ZBTB39O15060 712 aa6□□□□□ -1.45
PCF11-205ENST00000530906 HYAL3O43820 417 aaPredicted RBP6□□□□□ -1.45
PCF11-205ENST00000530906 LDHAP00338 332 aaKnown RBP6□□□□□ -1.45
PCF11-205ENST00000530906 PIGRP01833 764 aa6□□□□□ -1.45
PCF11-205ENST00000530906 SUPT20HL2P0C7V6 817 aa6□□□□□ -1.45
PCF11-205ENST00000530906 CPB1P15086 417 aa6□□□□□ -1.45
PCF11-205ENST00000530906 HSPA6P17066 643 aa6□□□□□ -1.45
PCF11-205ENST00000530906 EDNRBP24530 442 aa6□□□□□ -1.45
PCF11-205ENST00000530906 TARSP26639 723 aaKnown RBP6□□□□□ -1.45
PCF11-205ENST00000530906 KLRC1P26715 233 aa6□□□□□ -1.45
PCF11-205ENST00000530906 NAMPTP43490 491 aa6□□□□□ -1.45
PCF11-205ENST00000530906 NPTX2P47972 431 aa6□□□□□ -1.45
PCF11-205ENST00000530906 AARSP49588 968 aaKnown RBP eCLIP6□□□□□ -1.45
PCF11-205ENST00000530906 SLC26A2P50443 739 aa6□□□□□ -1.45
PCF11-205ENST00000530906 MXI1P50539 228 aa6□□□□□ -1.45
PCF11-205ENST00000530906 GPC3P51654 580 aa6□□□□□ -1.45
PCF11-205ENST00000530906 EPHB4P54760 987 aa6□□□□□ -1.45
PCF11-205ENST00000530906 MFAP3P55082 362 aa6□□□□□ -1.45
PCF11-205ENST00000530906 NAP1L1P55209 391 aaKnown RBP6□□□□□ -1.45
PCF11-205ENST00000530906 PEX3P56589 373 aa6□□□□□ -1.45
PCF11-205ENST00000530906 BPIFB4P59827 614 aa6□□□□□ -1.45
PCF11-205ENST00000530906 ACTR2P61160 394 aa6□□□□□ -1.45
PCF11-205ENST00000530906 CBX1P83916 185 aa6□□□□□ -1.45
PCF11-205ENST00000530906 APBA1Q02410 837 aa6□□□□□ -1.45
PCF11-205ENST00000530906 KCNA1Q09470 495 aa6□□□□□ -1.45
PCF11-205ENST00000530906 SMC1AQ14683 1233 aaKnown RBP6□□□□□ -1.45
PCF11-205ENST00000530906 DRAP1Q14919 205 aaPredicted RBP6□□□□□ -1.45
PCF11-205ENST00000530906 RPS6KA1Q15418 735 aa6□□□□□ -1.45
PCF11-205ENST00000530906 HSP90B2PQ58FF3 399 aa6□□□□□ -1.45
PCF11-205ENST00000530906 FAM160B1Q5W0V3 765 aa6□□□□□ -1.45
PCF11-205ENST00000530906 KRT39Q6A163 491 aa6□□□□□ -1.45
PCF11-205ENST00000530906 EMBQ6PCB8 327 aa6□□□□□ -1.45
PCF11-205ENST00000530906 ANO5Q75V66 913 aa6□□□□□ -1.45
PCF11-205ENST00000530906 ERO1BQ86YB8 467 aa6□□□□□ -1.45
PCF11-205ENST00000530906 LRRC57Q8N9N7 239 aa6□□□□□ -1.45
PCF11-205ENST00000530906 NOA1Q8NC60 698 aaKnown RBP6□□□□□ -1.45
PCF11-205ENST00000530906 LMO3Q8TAP4 145 aa6□□□□□ -1.45
PCF11-205ENST00000530906 ACTRT1Q8TDG2 376 aa6□□□□□ -1.45
PCF11-205ENST00000530906 WFDC12Q8WWY7 111 aa6□□□□□ -1.45
PCF11-205ENST00000530906 CTNNBL1Q8WYA6 563 aaPredicted RBP6□□□□□ -1.45
PCF11-205ENST00000530906 TTC9Q92623 222 aa6□□□□□ -1.45
PCF11-205ENST00000530906 ZKSCAN4Q969J2 545 aaPredicted RBP6□□□□□ -1.45
PCF11-205ENST00000530906 DCPSQ96C86 337 aaKnown RBP6□□□□□ -1.45
PCF11-205ENST00000530906 IFT43Q96FT9 208 aa6□□□□□ -1.45
PCF11-205ENST00000530906 CEP170P1Q96L14 293 aa6□□□□□ -1.45
PCF11-205ENST00000530906 MFSD14AQ96MC6 490 aa6□□□□□ -1.45
PCF11-205ENST00000530906 UIMC1Q96RL1 719 aa6□□□□□ -1.45
PCF11-205ENST00000530906 PNKPQ96T60 521 aa6□□□□□ -1.45
PCF11-205ENST00000530906 SYT11Q9BT88 431 aa6□□□□□ -1.45
PCF11-205ENST00000530906 MLXIPQ9HAP2 919 aa6□□□□□ -1.45
PCF11-205ENST00000530906 TMEM8AQ9HCN3 771 aa6□□□□□ -1.45
PCF11-205ENST00000530906 C11orf16Q9NQ32 467 aa6□□□□□ -1.45
PCF11-205ENST00000530906 CYP26B1Q9NR63 512 aa6□□□□□ -1.45
PCF11-205ENST00000530906 STIM2Q9P246 746 aa6□□□□□ -1.45
PCF11-205ENST00000530906 ARHGAP28Q9P2N2 729 aa6□□□□□ -1.45
PCF11-205ENST00000530906 HDAC6Q9UBN7 1215 aa6□□□□□ -1.45
PCF11-205ENST00000530906 GABBR1Q9UBS5 961 aa6□□□□□ -1.45
PCF11-205ENST00000530906 PPP1R1BQ9UD71 204 aaPredicted RBP6□□□□□ -1.45
PCF11-205ENST00000530906 TTC7AQ9ULT0 858 aaPredicted RBP6□□□□□ -1.45
PCF11-205ENST00000530906 SNCAIPQ9Y6H5 919 aa6□□□□□ -1.45
PCF11-205ENST00000530906 STYXL1Q9Y6J8 313 aa6□□□□□ -1.45
PCF11-205ENST00000530906 DUSP10Q9Y6W6 482 aa6□□□□□ -1.45
PCF11-205ENST00000530906 EMSYQ7Z589 1322 aa5.99□□□□□ -1.45
PCF11-205ENST00000530906 OTOFQ9HC10 1997 aa5.99□□□□□ -1.45
PCF11-205ENST00000530906 IGKV6D-21A0A0A0MT36 114 aa5.99□□□□□ -1.45
PCF11-205ENST00000530906 A0A0G2JLL6 359 aaPredicted RBP5.99□□□□□ -1.45
PCF11-205ENST00000530906 DENND3A2RUS2 1198 aa5.99□□□□□ -1.45
PCF11-205ENST00000530906 A6NNZ2 444 aa5.99□□□□□ -1.45
PCF11-205ENST00000530906 PGRMC1O00264 195 aaKnown RBP5.99□□□□□ -1.45
PCF11-205ENST00000530906 SLC16A4O15374 487 aa5.99□□□□□ -1.45
PCF11-205ENST00000530906 ATP9AO75110 1047 aa5.99□□□□□ -1.45
PCF11-205ENST00000530906 USP2O75604 605 aaPredicted RBP5.99□□□□□ -1.45
PCF11-205ENST00000530906 PALMO75781 387 aa5.99□□□□□ -1.45
PCF11-205ENST00000530906 MTA2O94776 668 aa5.99□□□□□ -1.45
PCF11-205ENST00000530906 STBD1O95210 358 aa5.99□□□□□ -1.45
PCF11-205ENST00000530906 KIF4AO95239 1232 aa5.99□□□□□ -1.45
PCF11-205ENST00000530906 RHOXF2BP0C7M4 288 aa5.99□□□□□ -1.45
PCF11-205ENST00000530906 ACTN1P12814 892 aa5.99□□□□□ -1.45
PCF11-205ENST00000530906 EPB42P16452 691 aa5.99□□□□□ -1.45
PCF11-205ENST00000530906 TNFAIP3P21580 790 aa5.99□□□□□ -1.45
PCF11-205ENST00000530906 NOS3P29474 1203 aa5.99□□□□□ -1.45
PCF11-205ENST00000530906 CNGA1P29973 690 aa5.99□□□□□ -1.45
PCF11-205ENST00000530906 EFNA5P52803 228 aa5.99□□□□□ -1.45
PCF11-205ENST00000530906 AP3M2P53677 418 aa5.99□□□□□ -1.45
PCF11-205ENST00000530906 VSNL1P62760 191 aa5.99□□□□□ -1.45
PCF11-205ENST00000530906 IRX3P78415 501 aaPredicted RBP5.99□□□□□ -1.45
PCF11-205ENST00000530906 PRKCEQ02156 737 aa5.99□□□□□ -1.45
PCF11-205ENST00000530906 GCNT1Q02742 428 aa5.99□□□□□ -1.45
PCF11-205ENST00000530906 ARID5AQ03989 594 aa5.99□□□□□ -1.45
PCF11-205ENST00000530906 DMTNQ08495 405 aa5.99□□□□□ -1.45
PCF11-205ENST00000530906 STRN3Q13033 797 aa5.99□□□□□ -1.45
PCF11-205ENST00000530906 GRM1Q13255 1194 aa5.99□□□□□ -1.45
PCF11-205ENST00000530906 DGKZQ13574 1117 aa5.99□□□□□ -1.45
PCF11-205ENST00000530906 VGLL4Q14135 290 aa5.99□□□□□ -1.45
PCF11-205ENST00000530906 CASP8Q14790 479 aa5.99□□□□□ -1.45
PCF11-205ENST00000530906 R3HDM1Q15032 1099 aaKnown RBP5.99□□□□□ -1.45
PCF11-205ENST00000530906 SNRNP35Q16560 246 aaKnown RBP5.99□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms