RNA–Protein interactions for RNA: ENST00000530395.1

SMPD1-204, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 5

Gene SMPD1, Length 447 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-204ENST00000530395 TBC1D4O60343 1298 aa22.76■■□□□ 1.23
SMPD1-204ENST00000530395 RHOP08100 348 aa22.76■■□□□ 1.23
SMPD1-204ENST00000530395 PTPN2P17706 415 aa22.76■■□□□ 1.23
SMPD1-204ENST00000530395 ZNF131P52739 623 aa22.76■■□□□ 1.23
SMPD1-204ENST00000530395 ANGPT1Q15389 498 aa22.76■■□□□ 1.23
SMPD1-204ENST00000530395 TCEAL8Q8IYN2 117 aa22.76■■□□□ 1.23
SMPD1-204ENST00000530395 ING5Q8WYH8 240 aa22.76■■□□□ 1.23
SMPD1-204ENST00000530395 DDX12PQ92771 950 aa22.76■■□□□ 1.23
SMPD1-204ENST00000530395 SHDQ96IW2 340 aa22.76■■□□□ 1.23
SMPD1-204ENST00000530395 RPP25Q9BUL9 199 aaKnown RBP22.76■■□□□ 1.23
SMPD1-204ENST00000530395 HAPLN2Q9GZV7 340 aa22.76■■□□□ 1.23
SMPD1-204ENST00000530395 ZHX3Q9H4I2 956 aa22.76■■□□□ 1.23
SMPD1-204ENST00000530395 AVENQ9NQS1 362 aaPredicted RBP22.76■■□□□ 1.23
SMPD1-204ENST00000530395 BLOC1S4Q9NUP1 217 aa22.76■■□□□ 1.23
SMPD1-204ENST00000530395 PCDHB8Q9UN66 801 aa22.76■■□□□ 1.23
SMPD1-204ENST00000530395 MIA3Q5JRA6 1907 aa22.76■■□□□ 1.23
SMPD1-204ENST00000530395 TTC26A0AVF1 554 aa22.75■■□□□ 1.23
SMPD1-204ENST00000530395 TRAK2O60296 914 aa22.75■■□□□ 1.23
SMPD1-204ENST00000530395 PIGRP01833 764 aa22.75■■□□□ 1.23
SMPD1-204ENST00000530395 CYP3A5P20815 502 aa22.75■■□□□ 1.23
SMPD1-204ENST00000530395 GPC5P78333 572 aa22.75■■□□□ 1.23
SMPD1-204ENST00000530395 SPAG1Q07617 926 aa22.75■■□□□ 1.23
SMPD1-204ENST00000530395 MCM6Q14566 821 aa22.75■■□□□ 1.23
SMPD1-204ENST00000530395 ELMOD1Q8N336 334 aa22.75■■□□□ 1.23
SMPD1-204ENST00000530395 LARP4BQ92615 738 aaKnown RBP22.75■■□□□ 1.23
SMPD1-204ENST00000530395 TSPAN18Q96SJ8 248 aa22.75■■□□□ 1.23
SMPD1-204ENST00000530395 RPF1Q9H9Y2 349 aaKnown RBP22.75■■□□□ 1.23
SMPD1-204ENST00000530395 GDE1Q9NZC3 331 aa22.75■■□□□ 1.23
SMPD1-204ENST00000530395 MAFFQ9ULX9 164 aa22.75■■□□□ 1.23
SMPD1-204ENST00000530395 INSL5Q9Y5Q6 135 aa22.75■■□□□ 1.23
SMPD1-204ENST00000530395 OGTO15294 1046 aa22.74■■□□□ 1.23
SMPD1-204ENST00000530395 CPB1P15086 417 aa22.74■■□□□ 1.23
SMPD1-204ENST00000530395 LRPAP1P30533 357 aa22.74■■□□□ 1.23
SMPD1-204ENST00000530395 TNFSF9P41273 254 aa22.74■■□□□ 1.23
SMPD1-204ENST00000530395 PFKPQ01813 784 aa22.74■■□□□ 1.23
SMPD1-204ENST00000530395 GRIN1Q05586 938 aa22.74■■□□□ 1.23
SMPD1-204ENST00000530395 CUL4AQ13619 759 aa22.74■■□□□ 1.23
SMPD1-204ENST00000530395 FRMD5Q7Z6J6 570 aa22.74■■□□□ 1.23
SMPD1-204ENST00000530395 LRRC15Q8TF66 581 aa22.74■■□□□ 1.23
SMPD1-204ENST00000530395 KXD1Q9BQD3 176 aa22.74■■□□□ 1.23
SMPD1-204ENST00000530395 MSTO1Q9BUK6 570 aa22.74■■□□□ 1.23
SMPD1-204ENST00000530395 SIT1Q9Y3P8 196 aa22.74■■□□□ 1.23
SMPD1-204ENST00000530395 WDR87Q6ZQQ6 2873 aa22.74■■□□□ 1.23
SMPD1-204ENST00000530395 RIF1Q5UIP0 2472 aaKnown RBP22.73■■□□□ 1.23
SMPD1-204ENST00000530395 YWHAHQ04917 246 aaPredicted RBP22.73■■□□□ 1.23
SMPD1-204ENST00000530395 CORO1BQ9BR76 489 aa22.73■■□□□ 1.23
SMPD1-204ENST00000530395 OXCT2Q9BYC2 517 aaPredicted RBP22.73■■□□□ 1.23
SMPD1-204ENST00000530395 CCSER1Q9C0I3 900 aa22.73■■□□□ 1.23
SMPD1-204ENST00000530395 AFF4Q9UHB7 1163 aaKnown RBP22.73■■□□□ 1.23
SMPD1-204ENST00000530395 PRR23AA6NEV1 266 aa22.72■■□□□ 1.23
SMPD1-204ENST00000530395 LACTBL1A8MY62 500 aa22.72■■□□□ 1.23
SMPD1-204ENST00000530395 M0QZQ0 153 aa22.72■■□□□ 1.23
SMPD1-204ENST00000530395 ZNF197O14709 1029 aa22.72■■□□□ 1.23
SMPD1-204ENST00000530395 SEC24AO95486 1093 aa22.72■■□□□ 1.23
SMPD1-204ENST00000530395 STARD6P59095 220 aa22.72■■□□□ 1.23
SMPD1-204ENST00000530395 ZBTB6Q15916 424 aa22.72■■□□□ 1.23
SMPD1-204ENST00000530395 ENOX2Q16206 610 aaKnown RBP22.72■■□□□ 1.23
SMPD1-204ENST00000530395 SLC5A9Q2M3M2 681 aa22.72■■□□□ 1.23
SMPD1-204ENST00000530395 SPECC1Q5M775 1068 aa22.72■■□□□ 1.23
SMPD1-204ENST00000530395 IQCEQ6IPM2 695 aa22.72■■□□□ 1.23
SMPD1-204ENST00000530395 USP37Q86T82 979 aa22.72■■□□□ 1.23
SMPD1-204ENST00000530395 MAP4K3Q8IVH8 894 aa22.72■■□□□ 1.23
SMPD1-204ENST00000530395 CD302Q8IX05 232 aa22.72■■□□□ 1.23
SMPD1-204ENST00000530395 KRI1Q8N9T8 703 aaKnown RBP22.72■■□□□ 1.23
SMPD1-204ENST00000530395 NKD2Q969F2 451 aaPredicted RBP22.72■■□□□ 1.23
SMPD1-204ENST00000530395 MCRS1Q96EZ8 462 aa22.72■■□□□ 1.23
SMPD1-204ENST00000530395 CCDC39Q9UFE4 941 aa22.72■■□□□ 1.23
SMPD1-204ENST00000530395 ANK1P16157 1881 aa22.71■■□□□ 1.23
SMPD1-204ENST00000530395 A0A0B4J269 797 aa22.71■■□□□ 1.23
SMPD1-204ENST00000530395 FAM189A1O60320 539 aa22.71■■□□□ 1.23
SMPD1-204ENST00000530395 ECI2O75521 394 aa22.71■■□□□ 1.23
SMPD1-204ENST00000530395 CEBPBP17676 345 aa22.71■■□□□ 1.23
SMPD1-204ENST00000530395 DDIT3P35638 169 aa22.71■■□□□ 1.23
SMPD1-204ENST00000530395 GTF2BQ00403 316 aa22.71■■□□□ 1.23
SMPD1-204ENST00000530395 PRKCQQ04759 706 aa22.71■■□□□ 1.23
SMPD1-204ENST00000530395 ADCY1Q08828 1119 aa22.71■■□□□ 1.23
SMPD1-204ENST00000530395 MLF2Q15773 248 aaPredicted RBP22.71■■□□□ 1.23
SMPD1-204ENST00000530395 CYP4A22Q5TCH4 519 aa22.71■■□□□ 1.23
SMPD1-204ENST00000530395 DSTYKQ6XUX3 929 aa22.71■■□□□ 1.23
SMPD1-204ENST00000530395 PDZD4Q76G19 769 aaPredicted RBP22.71■■□□□ 1.23
SMPD1-204ENST00000530395 ASCL5Q7RTU5 278 aa22.71■■□□□ 1.23
SMPD1-204ENST00000530395 PJA1Q8NG27 643 aa22.71■■□□□ 1.23
SMPD1-204ENST00000530395 FAM212AQ96EL1 285 aa22.71■■□□□ 1.23
SMPD1-204ENST00000530395 ZNF512Q96ME7 567 aaPredicted RBP22.71■■□□□ 1.23
SMPD1-204ENST00000530395 FAM186AA6NE01 2351 aa22.71■■□□□ 1.23
SMPD1-204ENST00000530395 MICAL2O94851 1124 aa22.7■■□□□ 1.22
SMPD1-204ENST00000530395 OAZ2O95190 189 aa22.7■■□□□ 1.22
SMPD1-204ENST00000530395 DCNP07585 359 aaKnown RBP22.7■■□□□ 1.22
SMPD1-204ENST00000530395 NMT1P30419 496 aaKnown RBP22.7■■□□□ 1.22
SMPD1-204ENST00000530395 TXLNAP40222 546 aa22.7■■□□□ 1.22
SMPD1-204ENST00000530395 AARSP49588 968 aaKnown RBP eCLIP22.7■■□□□ 1.22
SMPD1-204ENST00000530395 SNW1Q13573 536 aaKnown RBP22.7■■□□□ 1.22
SMPD1-204ENST00000530395 PRSS36Q5K4E3 855 aa22.7■■□□□ 1.22
SMPD1-204ENST00000530395 ZBTB41Q5SVQ8 909 aa22.7■■□□□ 1.22
SMPD1-204ENST00000530395 LEMD2Q8NC56 503 aa22.7■■□□□ 1.22
SMPD1-204ENST00000530395 BEST2Q8NFU1 509 aa22.7■■□□□ 1.22
SMPD1-204ENST00000530395 FOXQ1Q9C009 403 aa22.7■■□□□ 1.22
SMPD1-204ENST00000530395 STK17AQ9UEE5 414 aa22.7■■□□□ 1.22
SMPD1-204ENST00000530395 CLIC4Q9Y696 253 aa22.7■■□□□ 1.22
SMPD1-204ENST00000530395 PTPRZ1P23471 2315 aaPredicted RBP22.69■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms