RNA–Protein interactions for RNA: ENST00000526468.1

CAPN1-204, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 690 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-204ENST00000526468 ARHGEF37A1IGU5 675 aa12.83□□□□□ -0.36
CAPN1-204ENST00000526468 SYN3O14994 580 aa12.83□□□□□ -0.36
CAPN1-204ENST00000526468 CPB1P15086 417 aa12.83□□□□□ -0.36
CAPN1-204ENST00000526468 DDIT3P35638 169 aa12.83□□□□□ -0.36
CAPN1-204ENST00000526468 NPTX2P47972 431 aa12.83□□□□□ -0.36
CAPN1-204ENST00000526468 TRAPPC10P48553 1259 aa12.83□□□□□ -0.36
CAPN1-204ENST00000526468 NUCB2P80303 420 aa12.83□□□□□ -0.36
CAPN1-204ENST00000526468 NOLC1Q14978 699 aaKnown RBP eCLIP12.83□□□□□ -0.36
CAPN1-204ENST00000526468 KLHL40Q2TBA0 621 aa12.83□□□□□ -0.36
CAPN1-204ENST00000526468 ZNF528Q3MIS6 628 aa12.83□□□□□ -0.36
CAPN1-204ENST00000526468 ZBTB41Q5SVQ8 909 aa12.83□□□□□ -0.36
CAPN1-204ENST00000526468 SLC8B1Q6J4K2 584 aa12.83□□□□□ -0.36
CAPN1-204ENST00000526468 ZNF280DQ6N043 979 aa12.83□□□□□ -0.36
CAPN1-204ENST00000526468 MPZL3Q6UWV2 235 aa12.83□□□□□ -0.36
CAPN1-204ENST00000526468 PDZD4Q76G19 769 aaPredicted RBP12.83□□□□□ -0.36
CAPN1-204ENST00000526468 RTL10Q7L3V2 364 aa12.83□□□□□ -0.36
CAPN1-204ENST00000526468 ELMOD1Q8N336 334 aa12.83□□□□□ -0.36
CAPN1-204ENST00000526468 ATRIPQ8WXE1 791 aa12.83□□□□□ -0.36
CAPN1-204ENST00000526468 DNASE1L2Q92874 299 aa12.83□□□□□ -0.36
CAPN1-204ENST00000526468 ACO2Q99798 780 aaKnown RBP12.83□□□□□ -0.36
CAPN1-204ENST00000526468 TCHPQ9BT92 498 aa12.83□□□□□ -0.36
CAPN1-204ENST00000526468 RUSC1Q9BVN2 902 aa12.83□□□□□ -0.36
CAPN1-204ENST00000526468 TARS2Q9BW92 718 aaKnown RBP12.83□□□□□ -0.36
CAPN1-204ENST00000526468 OSBPL6Q9BZF3 934 aa12.83□□□□□ -0.36
CAPN1-204ENST00000526468 KMT5AQ9NQR1 393 aa12.83□□□□□ -0.36
CAPN1-204ENST00000526468 ARHGAP28Q9P2N2 729 aa12.83□□□□□ -0.36
CAPN1-204ENST00000526468 NDRG2Q9UN36 371 aaKnown RBP12.83□□□□□ -0.36
CAPN1-204ENST00000526468 MRPS17Q9Y2R5 130 aaKnown RBP12.83□□□□□ -0.36
CAPN1-204ENST00000526468 PCDHGA2Q9Y5H1 932 aa12.83□□□□□ -0.36
CAPN1-204ENST00000526468 PTPRDP23468 1912 aa12.82□□□□□ -0.36
CAPN1-204ENST00000526468 PP2D1A8MPX8 630 aa12.82□□□□□ -0.36
CAPN1-204ENST00000526468 E9PMD0 336 aa12.82□□□□□ -0.36
CAPN1-204ENST00000526468 H7C4K7 107 aa12.82□□□□□ -0.36
CAPN1-204ENST00000526468 MCF2P10911 925 aa12.82□□□□□ -0.36
CAPN1-204ENST00000526468 PTPN2P17706 415 aa12.82□□□□□ -0.36
CAPN1-204ENST00000526468 FCARP24071 287 aa12.82□□□□□ -0.36
CAPN1-204ENST00000526468 HMGN5P82970 282 aaKnown RBP12.82□□□□□ -0.36
CAPN1-204ENST00000526468 PUM1Q14671 1186 aaKnown RBP eCLIP12.82□□□□□ -0.36
CAPN1-204ENST00000526468 ZRSR1Q15695 479 aaKnown RBP12.82□□□□□ -0.36
CAPN1-204ENST00000526468 CTXN3Q4LDR2 81 aa12.82□□□□□ -0.36
CAPN1-204ENST00000526468 KRT79Q5XKE5 535 aa12.82□□□□□ -0.36
CAPN1-204ENST00000526468 ZNF852Q6ZMS4 543 aa12.82□□□□□ -0.36
CAPN1-204ENST00000526468 SUMF1Q8NBK3 374 aa12.82□□□□□ -0.36
CAPN1-204ENST00000526468 ZNF461Q8TAF7 563 aa12.82□□□□□ -0.36
CAPN1-204ENST00000526468 C18orf25Q96B23 403 aaPredicted RBP12.82□□□□□ -0.36
CAPN1-204ENST00000526468 ELSPBP1Q96BH3 223 aa12.82□□□□□ -0.36
CAPN1-204ENST00000526468 TCEAL4Q96EI5 215 aa12.82□□□□□ -0.36
CAPN1-204ENST00000526468 ZMAT2Q96NC0 199 aaKnown RBP12.82□□□□□ -0.36
CAPN1-204ENST00000526468 ACAP3Q96P50 834 aa12.82□□□□□ -0.36
CAPN1-204ENST00000526468 LLPHQ9BRT6 129 aaKnown RBP12.82□□□□□ -0.36
CAPN1-204ENST00000526468 PLA2G2FQ9BZM2 168 aa12.82□□□□□ -0.36
CAPN1-204ENST00000526468 BRD9Q9H8M2 597 aa12.82□□□□□ -0.36
CAPN1-204ENST00000526468 AVENQ9NQS1 362 aaPredicted RBP12.82□□□□□ -0.36
CAPN1-204ENST00000526468 PRMT8Q9NR22 394 aaPredicted RBP12.82□□□□□ -0.36
CAPN1-204ENST00000526468 CNTN3Q9P232 1028 aa12.82□□□□□ -0.36
CAPN1-204ENST00000526468 FBXL5Q9UKA1 691 aa12.82□□□□□ -0.36
CAPN1-204ENST00000526468 LIMCH1Q9UPQ0 1083 aa12.82□□□□□ -0.36
CAPN1-204ENST00000526468 STK24Q9Y6E0 443 aa12.82□□□□□ -0.36
CAPN1-204ENST00000526468 MYH10P35580 1976 aa12.81□□□□□ -0.36
CAPN1-204ENST00000526468 SLC16A4O15374 487 aa12.81□□□□□ -0.36
CAPN1-204ENST00000526468 NCAM2O15394 837 aa12.81□□□□□ -0.36
CAPN1-204ENST00000526468 MATR3P43243 847 aaKnown RBP eCLIP12.81□□□□□ -0.36
CAPN1-204ENST00000526468 RAD51AP2Q09MP3 1159 aa12.81□□□□□ -0.36
CAPN1-204ENST00000526468 STRN3Q13033 797 aa12.81□□□□□ -0.36
CAPN1-204ENST00000526468 FAM78AQ5JUQ0 283 aa12.81□□□□□ -0.36
CAPN1-204ENST00000526468 PRSS36Q5K4E3 855 aa12.81□□□□□ -0.36
CAPN1-204ENST00000526468 TANGO2Q6ICL3 276 aa12.81□□□□□ -0.36
CAPN1-204ENST00000526468 TSSK4Q6SA08 328 aa12.81□□□□□ -0.36
CAPN1-204ENST00000526468 TAS1R3Q7RTX0 852 aa12.81□□□□□ -0.36
CAPN1-204ENST00000526468 DAW1Q8N136 415 aa12.81□□□□□ -0.36
CAPN1-204ENST00000526468 IGSF22Q8N9C0 903 aa12.81□□□□□ -0.36
CAPN1-204ENST00000526468 FBXO18Q8NFZ0 1043 aa12.81□□□□□ -0.36
CAPN1-204ENST00000526468 SECISBP2LQ93073 1101 aaKnown RBP12.81□□□□□ -0.36
CAPN1-204ENST00000526468 SLITRK6Q9H5Y7 841 aa12.81□□□□□ -0.36
CAPN1-204ENST00000526468 ZFP14Q9HCL3 533 aa12.81□□□□□ -0.36
CAPN1-204ENST00000526468 PTPRHQ9HD43 1115 aa12.81□□□□□ -0.36
CAPN1-204ENST00000526468 ASAH2Q9NR71 780 aa12.81□□□□□ -0.36
CAPN1-204ENST00000526468 ZSCAN32Q9NX65 697 aa12.81□□□□□ -0.36
CAPN1-204ENST00000526468 TUBGCP4Q9UGJ1 667 aa12.81□□□□□ -0.36
CAPN1-204ENST00000526468 DNM3Q9UQ16 869 aa12.81□□□□□ -0.36
CAPN1-204ENST00000526468 ZNF197O14709 1029 aa12.8□□□□□ -0.36
CAPN1-204ENST00000526468 ABLIM3O94929 683 aa12.8□□□□□ -0.36
CAPN1-204ENST00000526468 SEC24AO95486 1093 aa12.8□□□□□ -0.36
CAPN1-204ENST00000526468 CXCL8P10145 99 aa12.8□□□□□ -0.36
CAPN1-204ENST00000526468 MYL4P12829 197 aa12.8□□□□□ -0.36
CAPN1-204ENST00000526468 ATF2P15336 505 aa12.8□□□□□ -0.36
CAPN1-204ENST00000526468 KCNE1P15382 129 aa12.8□□□□□ -0.36
CAPN1-204ENST00000526468 PROZP22891 400 aa12.8□□□□□ -0.36
CAPN1-204ENST00000526468 CCR2P41597 374 aa12.8□□□□□ -0.36
CAPN1-204ENST00000526468 RPS9P46781 194 aaKnown RBP12.8□□□□□ -0.36
CAPN1-204ENST00000526468 ZNF445P59923 1031 aa12.8□□□□□ -0.36
CAPN1-204ENST00000526468 ADCY1Q08828 1119 aa12.8□□□□□ -0.36
CAPN1-204ENST00000526468 TWF1Q12792 350 aa12.8□□□□□ -0.36
CAPN1-204ENST00000526468 MAPK7Q13164 816 aa12.8□□□□□ -0.36
CAPN1-204ENST00000526468 PTGDRQ13258 359 aa12.8□□□□□ -0.36
CAPN1-204ENST00000526468 RSPO4Q2I0M5 234 aaPredicted RBP12.8□□□□□ -0.36
CAPN1-204ENST00000526468 SEZ6Q53EL9 994 aa12.8□□□□□ -0.36
CAPN1-204ENST00000526468 XKR4Q5GH76 650 aa12.8□□□□□ -0.36
CAPN1-204ENST00000526468 CYP4A22Q5TCH4 519 aa12.8□□□□□ -0.36
CAPN1-204ENST00000526468 TPGS2Q68CL5 300 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms