RNA–Protein interactions for RNA: ENST00000526058.1

CCS-203, Transcript of copper chaperone for superoxide dismutase, humanhuman

TSL 4

Gene CCS, Length 593 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCS-203ENST00000526058 SPATA1Q5VX52 437 aa18.46■□□□□ 0.55
CCS-203ENST00000526058 CNNM4Q6P4Q7 775 aa18.46■□□□□ 0.55
CCS-203ENST00000526058 CCDC149Q6ZUS6 474 aa18.46■□□□□ 0.55
CCS-203ENST00000526058 TDRD5Q8NAT2 981 aaKnown RBP18.46■□□□□ 0.55
CCS-203ENST00000526058 EDAQ92838 391 aa18.46■□□□□ 0.55
CCS-203ENST00000526058 SAAL1Q96ER3 474 aa18.46■□□□□ 0.55
CCS-203ENST00000526058 SPATA32Q96LK8 384 aa18.46■□□□□ 0.55
CCS-203ENST00000526058 TSPAN18Q96SJ8 248 aa18.46■□□□□ 0.55
CCS-203ENST00000526058 RHOBTB2Q9BYZ6 727 aa18.46■□□□□ 0.55
CCS-203ENST00000526058 PRKD2Q9BZL6 878 aa18.46■□□□□ 0.55
CCS-203ENST00000526058 WDR6Q9NNW5 1121 aaKnown RBP18.46■□□□□ 0.55
CCS-203ENST00000526058 ZDHHC7Q9NXF8 308 aa18.46■□□□□ 0.55
CCS-203ENST00000526058 RAPGEFL1Q9UHV5 662 aa18.46■□□□□ 0.55
CCS-203ENST00000526058 KCNH3Q9ULD8 1083 aa18.46■□□□□ 0.55
CCS-203ENST00000526058 USTQ9Y2C2 406 aa18.46■□□□□ 0.55
CCS-203ENST00000526058 DOCK8Q8NF50 2099 aa18.45■□□□□ 0.54
CCS-203ENST00000526058 XPOTO43592 962 aaKnown RBP18.45■□□□□ 0.54
CCS-203ENST00000526058 TBC1D4O60343 1298 aa18.45■□□□□ 0.54
CCS-203ENST00000526058 C8AP07357 584 aa18.45■□□□□ 0.54
CCS-203ENST00000526058 COL9A1P20849 921 aa18.45■□□□□ 0.54
CCS-203ENST00000526058 AFMP43652 599 aa18.45■□□□□ 0.54
CCS-203ENST00000526058 WNT7BP56706 349 aa18.45■□□□□ 0.54
CCS-203ENST00000526058 KRT85P78386 507 aa18.45■□□□□ 0.54
CCS-203ENST00000526058 ZXDAP98168 799 aa18.45■□□□□ 0.54
CCS-203ENST00000526058 MRPL58Q14197 206 aaKnown RBP18.45■□□□□ 0.54
CCS-203ENST00000526058 TMEM132DQ14C87 1099 aa18.45■□□□□ 0.54
CCS-203ENST00000526058 CYP26C1Q6V0L0 522 aa18.45■□□□□ 0.54
CCS-203ENST00000526058 GRAMD1CQ8IYS0 662 aa18.45■□□□□ 0.54
CCS-203ENST00000526058 BEST2Q8NFU1 509 aa18.45■□□□□ 0.54
CCS-203ENST00000526058 CBWD1Q9BRT8 395 aa18.45■□□□□ 0.54
CCS-203ENST00000526058 FAM213AQ9BRX8 229 aa18.45■□□□□ 0.54
CCS-203ENST00000526058 PCIF1Q9H4Z3 704 aa18.45■□□□□ 0.54
CCS-203ENST00000526058 ASB7Q9H672 318 aa18.45■□□□□ 0.54
CCS-203ENST00000526058 MAGEF1Q9HAY2 307 aa18.45■□□□□ 0.54
CCS-203ENST00000526058 PIDD1Q9HB75 910 aa18.45■□□□□ 0.54
CCS-203ENST00000526058 LIMD1Q9UGP4 676 aa18.45■□□□□ 0.54
CCS-203ENST00000526058 SERTAD1Q9UHV2 236 aa18.45■□□□□ 0.54
CCS-203ENST00000526058 TIMM13Q9Y5L4 95 aaPredicted RBP18.45■□□□□ 0.54
CCS-203ENST00000526058 A0A1B0GVL5 298 aa18.44■□□□□ 0.54
CCS-203ENST00000526058 GOLGA8IPA6NC78 632 aa18.44■□□□□ 0.54
CCS-203ENST00000526058 GOLGA8JA6NMD2 632 aa18.44■□□□□ 0.54
CCS-203ENST00000526058 M0QZQ0 153 aa18.44■□□□□ 0.54
CCS-203ENST00000526058 N4BP1O75113 896 aaKnown RBP18.44■□□□□ 0.54
CCS-203ENST00000526058 HOXD13P35453 343 aa18.44■□□□□ 0.54
CCS-203ENST00000526058 AARSP49588 968 aaKnown RBP eCLIP18.44■□□□□ 0.54
CCS-203ENST00000526058 ARPP19P56211 112 aa18.44■□□□□ 0.54
CCS-203ENST00000526058 ROR1Q01973 937 aa18.44■□□□□ 0.54
CCS-203ENST00000526058 CUL4BQ13620 913 aa18.44■□□□□ 0.54
CCS-203ENST00000526058 BECN1Q14457 450 aa18.44■□□□□ 0.54
CCS-203ENST00000526058 PTPN21Q16825 1174 aa18.44■□□□□ 0.54
CCS-203ENST00000526058 LIN9Q5TKA1 542 aa18.44■□□□□ 0.54
CCS-203ENST00000526058 SLC8B1Q6J4K2 584 aa18.44■□□□□ 0.54
CCS-203ENST00000526058 OTOP3Q7RTS5 596 aa18.44■□□□□ 0.54
CCS-203ENST00000526058 ZDHHC14Q8IZN3 488 aa18.44■□□□□ 0.54
CCS-203ENST00000526058 SLC7A14Q8TBB6 771 aa18.44■□□□□ 0.54
CCS-203ENST00000526058 TMEM206Q9H813 350 aa18.44■□□□□ 0.54
CCS-203ENST00000526058 FBXL5Q9UKA1 691 aa18.44■□□□□ 0.54
CCS-203ENST00000526058 PCDHB8Q9UN66 801 aa18.44■□□□□ 0.54
CCS-203ENST00000526058 DERAQ9Y315 318 aa18.44■□□□□ 0.54
CCS-203ENST00000526058 GTF3C5Q9Y5Q8 519 aaPredicted RBP18.44■□□□□ 0.54
CCS-203ENST00000526058 CLUHO75153 1309 aa18.44■□□□□ 0.54
CCS-203ENST00000526058 WDR27A2RRH5 827 aa18.43■□□□□ 0.54
CCS-203ENST00000526058 PRR33A8MZF0 331 aa18.43■□□□□ 0.54
CCS-203ENST00000526058 H7C4K7 107 aa18.43■□□□□ 0.54
CCS-203ENST00000526058 TULP1O00294 542 aaPredicted RBP18.43■□□□□ 0.54
CCS-203ENST00000526058 CCL16O15467 120 aa18.43■□□□□ 0.54
CCS-203ENST00000526058 ACTN4O43707 911 aaKnown RBP18.43■□□□□ 0.54
CCS-203ENST00000526058 ASGR2P07307 311 aa18.43■□□□□ 0.54
CCS-203ENST00000526058 PFKFB1P16118 471 aa18.43■□□□□ 0.54
CCS-203ENST00000526058 GARTP22102 1010 aa18.43■□□□□ 0.54
CCS-203ENST00000526058 CMA1P23946 247 aa18.43■□□□□ 0.54
CCS-203ENST00000526058 POU5F1Q01860 360 aaKnown RBP18.43■□□□□ 0.54
CCS-203ENST00000526058 EHHADHQ08426 723 aa18.43■□□□□ 0.54
CCS-203ENST00000526058 CTXN3Q4LDR2 81 aa18.43■□□□□ 0.54
CCS-203ENST00000526058 FAM26FQ5R3K3 315 aa18.43■□□□□ 0.54
CCS-203ENST00000526058 PPM1LQ5SGD2 360 aa18.43■□□□□ 0.54
CCS-203ENST00000526058 C9orf57Q5W0N0 161 aa18.43■□□□□ 0.54
CCS-203ENST00000526058 UNC13DQ70J99 1090 aa18.43■□□□□ 0.54
CCS-203ENST00000526058 EPM2AIP1Q7L775 607 aaPredicted RBP18.43■□□□□ 0.54
CCS-203ENST00000526058 EFCAB13Q8IY85 973 aa18.43■□□□□ 0.54
CCS-203ENST00000526058 APPL2Q8NEU8 664 aa18.43■□□□□ 0.54
CCS-203ENST00000526058 NOC3LQ8WTT2 800 aaKnown RBP18.43■□□□□ 0.54
CCS-203ENST00000526058 ACSF2Q96CM8 615 aaPredicted RBP18.43■□□□□ 0.54
CCS-203ENST00000526058 C2CD2Q9Y426 696 aa18.43■□□□□ 0.54
CCS-203ENST00000526058 ANO9A1A5B4 782 aa18.42■□□□□ 0.54
CCS-203ENST00000526058 PIRO00625 290 aa18.42■□□□□ 0.54
CCS-203ENST00000526058 SPTLC1O15269 473 aa18.42■□□□□ 0.54
CCS-203ENST00000526058 ABLIM3O94929 683 aa18.42■□□□□ 0.54
CCS-203ENST00000526058 LDHAP00338 332 aaKnown RBP18.42■□□□□ 0.54
CCS-203ENST00000526058 HNRNPA1P09651 372 aaKnown RBP eCLIP18.42■□□□□ 0.54
CCS-203ENST00000526058 SLFN14P0C7P3 912 aa18.42■□□□□ 0.54
CCS-203ENST00000526058 LILRA4P59901 499 aa18.42■□□□□ 0.54
CCS-203ENST00000526058 ZNF280DQ6N043 979 aa18.42■□□□□ 0.54
CCS-203ENST00000526058 DSTYKQ6XUX3 929 aa18.42■□□□□ 0.54
CCS-203ENST00000526058 TRIM67Q6ZTA4 783 aa18.42■□□□□ 0.54
CCS-203ENST00000526058 STXBP4Q6ZWJ1 553 aa18.42■□□□□ 0.54
CCS-203ENST00000526058 GRASPQ7Z6J2 395 aaPredicted RBP18.42■□□□□ 0.54
CCS-203ENST00000526058 BRSK2Q8IWQ3 736 aa18.42■□□□□ 0.54
CCS-203ENST00000526058 CEP57L1Q8IYX8 460 aa18.42■□□□□ 0.54
CCS-203ENST00000526058 PLCD3Q8N3E9 789 aa18.42■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms