RNA–Protein interactions for RNA: ENST00000524475.1

SF3B2-202, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 3

Gene SF3B2, Length 432 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-202ENST00000524475 SCN1AP35498 2009 aa16.35■□□□□ 0.21
SF3B2-202ENST00000524475 ARHGEF37A1IGU5 675 aa16.34■□□□□ 0.21
SF3B2-202ENST00000524475 GLP2RO95838 553 aa16.34■□□□□ 0.21
SF3B2-202ENST00000524475 ADH1AP07327 375 aa16.34■□□□□ 0.21
SF3B2-202ENST00000524475 CNPP09543 421 aaKnown RBP16.34■□□□□ 0.21
SF3B2-202ENST00000524475 RPL13P26373 211 aaKnown RBP16.34■□□□□ 0.21
SF3B2-202ENST00000524475 GTF2F1P35269 517 aaKnown RBP eCLIP16.34■□□□□ 0.21
SF3B2-202ENST00000524475 PNPLA4P41247 253 aa16.34■□□□□ 0.21
SF3B2-202ENST00000524475 PRCPP42785 496 aa16.34■□□□□ 0.21
SF3B2-202ENST00000524475 NDUFV1P49821 464 aa16.34■□□□□ 0.21
SF3B2-202ENST00000524475 LILRA4P59901 499 aa16.34■□□□□ 0.21
SF3B2-202ENST00000524475 MCCD1P59942 119 aaPredicted RBP16.34■□□□□ 0.21
SF3B2-202ENST00000524475 CLDN10P78369 228 aa16.34■□□□□ 0.21
SF3B2-202ENST00000524475 MORC3Q14149 939 aa16.34■□□□□ 0.21
SF3B2-202ENST00000524475 LEXMQ3ZCV2 418 aa16.34■□□□□ 0.21
SF3B2-202ENST00000524475 RBM23Q86U06 439 aaKnown RBP16.34■□□□□ 0.21
SF3B2-202ENST00000524475 PHF6Q8IWS0 365 aaKnown RBP eCLIP16.34■□□□□ 0.21
SF3B2-202ENST00000524475 ADSSL1Q8N142 457 aa16.34■□□□□ 0.21
SF3B2-202ENST00000524475 LRRC52Q8N7C0 313 aa16.34■□□□□ 0.21
SF3B2-202ENST00000524475 CXorf38Q8TB03 319 aa16.34■□□□□ 0.21
SF3B2-202ENST00000524475 LNX1Q8TBB1 728 aaPredicted RBP16.34■□□□□ 0.21
SF3B2-202ENST00000524475 RIN2Q8WYP3 895 aaPredicted RBP16.34■□□□□ 0.21
SF3B2-202ENST00000524475 CASP10Q92851 521 aa16.34■□□□□ 0.21
SF3B2-202ENST00000524475 ERCC4Q92889 916 aaPredicted RBP16.34■□□□□ 0.21
SF3B2-202ENST00000524475 MSLNLQ96KJ4 702 aa16.34■□□□□ 0.21
SF3B2-202ENST00000524475 CLSTN2Q9H4D0 955 aa16.34■□□□□ 0.21
SF3B2-202ENST00000524475 PDE11AQ9HCR9 933 aa16.34■□□□□ 0.21
SF3B2-202ENST00000524475 PRDM6Q9NQX0 595 aa16.34■□□□□ 0.21
SF3B2-202ENST00000524475 INTS13Q9NVM9 706 aa16.34■□□□□ 0.21
SF3B2-202ENST00000524475 CLDND1Q9NY35 253 aa16.34■□□□□ 0.21
SF3B2-202ENST00000524475 ITGA11Q9UKX5 1188 aa16.34■□□□□ 0.21
SF3B2-202ENST00000524475 BACE2Q9Y5Z0 518 aa16.34■□□□□ 0.21
SF3B2-202ENST00000524475 HCFC2Q9Y5Z7 792 aa16.34■□□□□ 0.21
SF3B2-202ENST00000524475 PER2O15055 1255 aa16.33■□□□□ 0.2
SF3B2-202ENST00000524475 TEX28O15482 410 aa16.33■□□□□ 0.2
SF3B2-202ENST00000524475 TBX10O75333 385 aa16.33■□□□□ 0.2
SF3B2-202ENST00000524475 HOXB8P17481 243 aaPredicted RBP16.33■□□□□ 0.2
SF3B2-202ENST00000524475 NR2F2P24468 414 aa16.33■□□□□ 0.2
SF3B2-202ENST00000524475 IGFBP6P24592 240 aaPredicted RBP16.33■□□□□ 0.2
SF3B2-202ENST00000524475 MCM4P33991 863 aa16.33■□□□□ 0.2
SF3B2-202ENST00000524475 BRCC3P46736 316 aa16.33■□□□□ 0.2
SF3B2-202ENST00000524475 CLCN4P51793 760 aa16.33■□□□□ 0.2
SF3B2-202ENST00000524475 GUCY2FP51841 1108 aa16.33■□□□□ 0.2
SF3B2-202ENST00000524475 AP3M2P53677 418 aa16.33■□□□□ 0.2
SF3B2-202ENST00000524475 TFAMQ00059 246 aaKnown RBP16.33■□□□□ 0.2
SF3B2-202ENST00000524475 LRRC63Q05C16 580 aa16.33■□□□□ 0.2
SF3B2-202ENST00000524475 STIM1Q13586 685 aa16.33■□□□□ 0.2
SF3B2-202ENST00000524475 MRPL58Q14197 206 aaKnown RBP16.33■□□□□ 0.2
SF3B2-202ENST00000524475 PSMD5Q16401 504 aa16.33■□□□□ 0.2
SF3B2-202ENST00000524475 DUOXA2Q1HG44 320 aa16.33■□□□□ 0.2
SF3B2-202ENST00000524475 PUS10Q3MIT2 529 aaKnown RBP16.33■□□□□ 0.2
SF3B2-202ENST00000524475 ANKS3Q6ZW76 656 aa16.33■□□□□ 0.2
SF3B2-202ENST00000524475 ZC3H3Q8IXZ2 948 aaKnown RBP16.33■□□□□ 0.2
SF3B2-202ENST00000524475 SMYD4Q8IYR2 804 aaPredicted RBP16.33■□□□□ 0.2
SF3B2-202ENST00000524475 C1orf127Q8N9H9 656 aa16.33■□□□□ 0.2
SF3B2-202ENST00000524475 APPL2Q8NEU8 664 aa16.33■□□□□ 0.2
SF3B2-202ENST00000524475 VN1R2Q8NFZ6 395 aa16.33■□□□□ 0.2
SF3B2-202ENST00000524475 SLC22A17Q8WUG5 538 aa16.33■□□□□ 0.2
SF3B2-202ENST00000524475 HDAC7Q8WUI4 952 aa16.33■□□□□ 0.2
SF3B2-202ENST00000524475 ANKRD36BP1Q96IX9 119 aa16.33■□□□□ 0.2
SF3B2-202ENST00000524475 ZNF560Q96MR9 790 aa16.33■□□□□ 0.2
SF3B2-202ENST00000524475 CGRRF1Q99675 332 aa16.33■□□□□ 0.2
SF3B2-202ENST00000524475 MKNK1Q9BUB5 465 aa16.33■□□□□ 0.2
SF3B2-202ENST00000524475 OXCT2Q9BYC2 517 aaPredicted RBP16.33■□□□□ 0.2
SF3B2-202ENST00000524475 GZF1Q9H116 711 aaPredicted RBP16.33■□□□□ 0.2
SF3B2-202ENST00000524475 IGFLR1Q9H665 355 aa16.33■□□□□ 0.2
SF3B2-202ENST00000524475 DZANK1Q9NVP4 752 aa16.33■□□□□ 0.2
SF3B2-202ENST00000524475 MTRRQ9UBK8 725 aa16.33■□□□□ 0.2
SF3B2-202ENST00000524475 DPP7Q9UHL4 492 aa16.33■□□□□ 0.2
SF3B2-202ENST00000524475 PCDHB8Q9UN66 801 aa16.33■□□□□ 0.2
SF3B2-202ENST00000524475 MAPK8IP1Q9UQF2 711 aa16.33■□□□□ 0.2
SF3B2-202ENST00000524475 FRMD4BQ9Y2L6 1034 aa16.33■□□□□ 0.2
SF3B2-202ENST00000524475 MTCL1Q9Y4B5 1905 aaKnown RBP16.33■□□□□ 0.2
SF3B2-202ENST00000524475 PSMA7O14818 248 aa16.32■□□□□ 0.2
SF3B2-202ENST00000524475 LINC01565O15544 149 aa16.32■□□□□ 0.2
SF3B2-202ENST00000524475 PAPLNO95428 1278 aa16.32■□□□□ 0.2
SF3B2-202ENST00000524475 TMEM191BP0C7N4 346 aa16.32■□□□□ 0.2
SF3B2-202ENST00000524475 TYMPP19971 482 aa16.32■□□□□ 0.2
SF3B2-202ENST00000524475 BMP6P22004 513 aa16.32■□□□□ 0.2
SF3B2-202ENST00000524475 TKTP29401 623 aaKnown RBP16.32■□□□□ 0.2
SF3B2-202ENST00000524475 TAF6P49848 677 aa16.32■□□□□ 0.2
SF3B2-202ENST00000524475 MRPS5P82675 430 aaKnown RBP16.32■□□□□ 0.2
SF3B2-202ENST00000524475 USP37Q86T82 979 aa16.32■□□□□ 0.2
SF3B2-202ENST00000524475 TMC2Q8TDI7 906 aa16.32■□□□□ 0.2
SF3B2-202ENST00000524475 PARD3BQ8TEW8 1205 aa16.32■□□□□ 0.2
SF3B2-202ENST00000524475 NOC3LQ8WTT2 800 aaKnown RBP16.32■□□□□ 0.2
SF3B2-202ENST00000524475 DHTKD1Q96HY7 919 aaPredicted RBP16.32■□□□□ 0.2
SF3B2-202ENST00000524475 B3GALT6Q96L58 329 aa16.32■□□□□ 0.2
SF3B2-202ENST00000524475 FNBP1Q96RU3 617 aa16.32■□□□□ 0.2
SF3B2-202ENST00000524475 MTMR12Q9C0I1 747 aa16.32■□□□□ 0.2
SF3B2-202ENST00000524475 CLEC1BQ9P126 229 aa16.32■□□□□ 0.2
SF3B2-202ENST00000524475 TSC2P49815 1807 aa16.31■□□□□ 0.2
SF3B2-202ENST00000524475 PTPRJQ12913 1337 aa16.31■□□□□ 0.2
SF3B2-202ENST00000524475 C2CD2LO14523 706 aa16.31■□□□□ 0.2
SF3B2-202ENST00000524475 PPEF2O14830 753 aa16.31■□□□□ 0.2
SF3B2-202ENST00000524475 TBC1D4O60343 1298 aa16.31■□□□□ 0.2
SF3B2-202ENST00000524475 TNNC2P02585 160 aa16.31■□□□□ 0.2
SF3B2-202ENST00000524475 CYP11A1P05108 521 aa16.31■□□□□ 0.2
SF3B2-202ENST00000524475 KCNA5P22460 613 aa16.31■□□□□ 0.2
SF3B2-202ENST00000524475 CCNE1P24864 410 aa16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 147.8 ms