RNA–Protein interactions for RNA: ENST00000523125.5

VEGFA-223, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 541 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-223ENST00000523125 HCFC1R1Q9NWW0 138 aa13.47□□□□□ -0.25
VEGFA-223ENST00000523125 TFIP11Q9UBB9 837 aaKnown RBP13.47□□□□□ -0.25
VEGFA-223ENST00000523125 DNMT3BQ9UBC3 853 aaKnown RBP13.47□□□□□ -0.25
VEGFA-223ENST00000523125 FBXL5Q9UKA1 691 aa13.47□□□□□ -0.25
VEGFA-223ENST00000523125 STYXL1Q9Y6J8 313 aa13.47□□□□□ -0.25
VEGFA-223ENST00000523125 M0QZQ0 153 aa13.46□□□□□ -0.25
VEGFA-223ENST00000523125 PPEF2O14830 753 aa13.46□□□□□ -0.25
VEGFA-223ENST00000523125 ATF2P15336 505 aa13.46□□□□□ -0.25
VEGFA-223ENST00000523125 FSHRP23945 695 aa13.46□□□□□ -0.25
VEGFA-223ENST00000523125 ADSSP30520 456 aa13.46□□□□□ -0.25
VEGFA-223ENST00000523125 MCM4P33991 863 aa13.46□□□□□ -0.25
VEGFA-223ENST00000523125 TXLNAP40222 546 aa13.46□□□□□ -0.25
VEGFA-223ENST00000523125 AARSP49588 968 aaKnown RBP eCLIP13.46□□□□□ -0.251e-6■■■■□ 20.6
VEGFA-223ENST00000523125 ACOT2P49753 483 aa13.46□□□□□ -0.25
VEGFA-223ENST00000523125 KCNA1Q09470 495 aa13.46□□□□□ -0.25
VEGFA-223ENST00000523125 HTR4Q13639 388 aa13.46□□□□□ -0.25
VEGFA-223ENST00000523125 JADE1Q6IE81 842 aa13.46□□□□□ -0.25
VEGFA-223ENST00000523125 ITFG1Q8TB96 612 aa13.46□□□□□ -0.25
VEGFA-223ENST00000523125 NXPE3Q969Y0 559 aa13.46□□□□□ -0.25
VEGFA-223ENST00000523125 TSPAN18Q96SJ8 248 aa13.46□□□□□ -0.25
VEGFA-223ENST00000523125 RPF1Q9H9Y2 349 aaKnown RBP13.46□□□□□ -0.25
VEGFA-223ENST00000523125 SEL1LQ9UBV2 794 aa13.46□□□□□ -0.25
VEGFA-223ENST00000523125 UBQLN1Q9UMX0 589 aaKnown RBP13.46□□□□□ -0.25
VEGFA-223ENST00000523125 PCDHB8Q9UN66 801 aa13.46□□□□□ -0.25
VEGFA-223ENST00000523125 ARHGEF37A1IGU5 675 aa13.45□□□□□ -0.26
VEGFA-223ENST00000523125 FRMD3A2A2Y4 597 aa13.45□□□□□ -0.26
VEGFA-223ENST00000523125 H7C4K7 107 aa13.45□□□□□ -0.26
VEGFA-223ENST00000523125 XYLBO75191 536 aa13.45□□□□□ -0.26
VEGFA-223ENST00000523125 SEC24AO95486 1093 aa13.45□□□□□ -0.26
VEGFA-223ENST00000523125 NPR3P17342 541 aa13.45□□□□□ -0.26
VEGFA-223ENST00000523125 GAP43P17677 238 aa13.45□□□□□ -0.26
VEGFA-223ENST00000523125 STAT6P42226 847 aa13.45□□□□□ -0.26
VEGFA-223ENST00000523125 CASP5P51878 434 aa13.45□□□□□ -0.26
VEGFA-223ENST00000523125 TCF15Q12870 199 aa13.45□□□□□ -0.26
VEGFA-223ENST00000523125 CTXN3Q4LDR2 81 aa13.45□□□□□ -0.26
VEGFA-223ENST00000523125 SPATA1Q5VX52 437 aa13.45□□□□□ -0.26
VEGFA-223ENST00000523125 CRELD2Q6UXH1 353 aaPredicted RBP13.45□□□□□ -0.26
VEGFA-223ENST00000523125 CCDC73Q6ZRK6 1079 aa13.45□□□□□ -0.26
VEGFA-223ENST00000523125 TCEAL8Q8IYN2 117 aa13.45□□□□□ -0.26
VEGFA-223ENST00000523125 TMEM105Q8N8V8 129 aa13.45□□□□□ -0.26
VEGFA-223ENST00000523125 APPL2Q8NEU8 664 aa13.45□□□□□ -0.26
VEGFA-223ENST00000523125 ST13P5Q8NFI4 369 aaPredicted RBP13.45□□□□□ -0.26
VEGFA-223ENST00000523125 FGF13Q92913 245 aa13.45□□□□□ -0.26
VEGFA-223ENST00000523125 HVCN1Q96D96 273 aa13.45□□□□□ -0.26
VEGFA-223ENST00000523125 FGFBP2Q9BYJ0 223 aa13.45□□□□□ -0.26
VEGFA-223ENST00000523125 MRPL44Q9H9J2 332 aaKnown RBP13.45□□□□□ -0.26
VEGFA-223ENST00000523125 OLFML3Q9NRN5 406 aa13.45□□□□□ -0.26
VEGFA-223ENST00000523125 TBC1D7Q9P0N9 293 aa13.45□□□□□ -0.26
VEGFA-223ENST00000523125 AGO2Q9UKV8 859 aaKnown RBP13.45□□□□□ -0.26
VEGFA-223ENST00000523125 POLIQ9UNA4 740 aa13.45□□□□□ -0.26
VEGFA-223ENST00000523125 ZFP37Q9Y6Q3 630 aaPredicted RBP13.45□□□□□ -0.26
VEGFA-223ENST00000523125 USP34Q70CQ2 3546 aa13.45□□□□□ -0.26
VEGFA-223ENST00000523125 ANO9A1A5B4 782 aa13.44□□□□□ -0.26
VEGFA-223ENST00000523125 SPTLC2O15270 562 aa13.44□□□□□ -0.26
VEGFA-223ENST00000523125 PPP6R2O75170 966 aa13.44□□□□□ -0.26
VEGFA-223ENST00000523125 OAZ2O95190 189 aa13.44□□□□□ -0.26
VEGFA-223ENST00000523125 NFICP08651 508 aa13.44□□□□□ -0.26
VEGFA-223ENST00000523125 ARPP19P56211 112 aa13.44□□□□□ -0.26
VEGFA-223ENST00000523125 LILRA4P59901 499 aa13.44□□□□□ -0.26
VEGFA-223ENST00000523125 STK38Q15208 465 aa13.44□□□□□ -0.26
VEGFA-223ENST00000523125 E2F4Q16254 413 aa13.44□□□□□ -0.26
VEGFA-223ENST00000523125 TPGS2Q68CL5 300 aa13.44□□□□□ -0.26
VEGFA-223ENST00000523125 ADALQ6DHV7 355 aa13.44□□□□□ -0.26
VEGFA-223ENST00000523125 SLFN12LQ6IEE8 588 aa13.44□□□□□ -0.26
VEGFA-223ENST00000523125 POTEHQ6S545 545 aa13.44□□□□□ -0.26
VEGFA-223ENST00000523125 CD302Q8IX05 232 aa13.44□□□□□ -0.26
VEGFA-223ENST00000523125 PDILTQ8N807 584 aa13.44□□□□□ -0.26
VEGFA-223ENST00000523125 ZSWIM2Q8NEG5 633 aa13.44□□□□□ -0.26
VEGFA-223ENST00000523125 FGF14Q92915 247 aa13.44□□□□□ -0.26
VEGFA-223ENST00000523125 FAM212AQ96EL1 285 aa13.44□□□□□ -0.26
VEGFA-223ENST00000523125 PRRX2Q99811 253 aa13.44□□□□□ -0.26
VEGFA-223ENST00000523125 RPP25Q9BUL9 199 aaKnown RBP13.44□□□□□ -0.26
VEGFA-223ENST00000523125 CDH7Q9ULB5 785 aa13.44□□□□□ -0.26
VEGFA-223ENST00000523125 DERAQ9Y315 318 aa13.44□□□□□ -0.26
VEGFA-223ENST00000523125 TIMM13Q9Y5L4 95 aaPredicted RBP13.44□□□□□ -0.26
VEGFA-223ENST00000523125 GTF3C5Q9Y5Q8 519 aaPredicted RBP13.44□□□□□ -0.26
VEGFA-223ENST00000523125 PIEZO1Q92508 2521 aa13.43□□□□□ -0.26
VEGFA-223ENST00000523125 KRBA1A5PL33 1030 aa13.43□□□□□ -0.26
VEGFA-223ENST00000523125 PIRO00625 290 aa13.43□□□□□ -0.26
VEGFA-223ENST00000523125 PRRG1O14668 218 aa13.43□□□□□ -0.26
VEGFA-223ENST00000523125 SPTLC1O15269 473 aa13.43□□□□□ -0.26
VEGFA-223ENST00000523125 XPOTO43592 962 aaKnown RBP13.43□□□□□ -0.26
VEGFA-223ENST00000523125 VNN2O95498 520 aa13.43□□□□□ -0.26
VEGFA-223ENST00000523125 YEATS4O95619 227 aa13.43□□□□□ -0.26
VEGFA-223ENST00000523125 ZSCAN22P10073 491 aaPredicted RBP13.43□□□□□ -0.26
VEGFA-223ENST00000523125 SRFP11831 508 aa13.43□□□□□ -0.26
VEGFA-223ENST00000523125 CLCN5P51795 746 aa13.43□□□□□ -0.26
VEGFA-223ENST00000523125 PKP1Q13835 747 aa13.43□□□□□ -0.26
VEGFA-223ENST00000523125 SLC5A9Q2M3M2 681 aa13.43□□□□□ -0.26
VEGFA-223ENST00000523125 PABPC1LQ4VXU2 614 aaKnown RBP13.43□□□□□ -0.26
VEGFA-223ENST00000523125 L1TD1Q5T7N2 865 aaKnown RBP13.43□□□□□ -0.26
VEGFA-223ENST00000523125 FOXD4L5Q5VV16 416 aaPredicted RBP13.43□□□□□ -0.26
VEGFA-223ENST00000523125 C9orf57Q5W0N0 161 aa13.43□□□□□ -0.26
VEGFA-223ENST00000523125 CWF19L1Q69YN2 538 aaKnown RBP13.43□□□□□ -0.26
VEGFA-223ENST00000523125 ASTLQ6HA08 431 aaPredicted RBP13.43□□□□□ -0.26
VEGFA-223ENST00000523125 ZNF280DQ6N043 979 aa13.43□□□□□ -0.26
VEGFA-223ENST00000523125 SHC4Q6S5L8 630 aa13.43□□□□□ -0.26
VEGFA-223ENST00000523125 PARM1Q6UWI2 310 aa13.43□□□□□ -0.26
VEGFA-223ENST00000523125 RNF19BQ6ZMZ0 732 aa13.43□□□□□ -0.26
VEGFA-223ENST00000523125 NPAS3Q8IXF0 933 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms