RNA–Protein interactions for RNA: ENST00000521977.1

SHPRH-209, Transcript of SNF2 histone linker PHD RING helicase, humanhuman

TSL 5

Gene SHPRH, Length 927 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPRH-209ENST00000521977 C17orf53Q8N3J3 647 aaPredicted RBP10.26□□□□□ -0.77
SHPRH-209ENST00000521977 C1orf127Q8N9H9 656 aa10.26□□□□□ -0.77
SHPRH-209ENST00000521977 U2AF1L4Q8WU68 220 aaKnown RBP10.26□□□□□ -0.77
SHPRH-209ENST00000521977 SHC3Q92529 594 aa10.26□□□□□ -0.77
SHPRH-209ENST00000521977 TATDN2Q93075 761 aa10.26□□□□□ -0.77
SHPRH-209ENST00000521977 JAKMIP2Q96AA8 810 aa10.26□□□□□ -0.77
SHPRH-209ENST00000521977 FAXDC2Q96IV6 333 aa10.26□□□□□ -0.77
SHPRH-209ENST00000521977 TSPAN18Q96SJ8 248 aa10.26□□□□□ -0.77
SHPRH-209ENST00000521977 EIF3CQ99613 913 aaKnown RBP10.26□□□□□ -0.77
SHPRH-209ENST00000521977 NXF3Q9H4D5 531 aaKnown RBP10.26□□□□□ -0.77
SHPRH-209ENST00000521977 NHEJ1Q9H9Q4 299 aaPredicted RBP10.26□□□□□ -0.77
SHPRH-209ENST00000521977 APOBEC3GQ9HC16 384 aaKnown RBP10.26□□□□□ -0.77
SHPRH-209ENST00000521977 UBE2TQ9NPD8 197 aaPredicted RBP10.26□□□□□ -0.77
SHPRH-209ENST00000521977 SIX4Q9UIU6 781 aa10.26□□□□□ -0.77
SHPRH-209ENST00000521977 PADI3Q9ULW8 664 aa10.26□□□□□ -0.77
SHPRH-209ENST00000521977 IPPQ9Y573 584 aa10.26□□□□□ -0.77
SHPRH-209ENST00000521977 ADGRG1Q9Y653 693 aa10.26□□□□□ -0.77
SHPRH-209ENST00000521977 PDCD11Q14690 1871 aaKnown RBP10.25□□□□□ -0.77
SHPRH-209ENST00000521977 FOXN3O00409 490 aaPredicted RBP10.25□□□□□ -0.77
SHPRH-209ENST00000521977 MGEA5O60502 916 aa10.25□□□□□ -0.77
SHPRH-209ENST00000521977 RECQL4O94761 1208 aa10.25□□□□□ -0.77
SHPRH-209ENST00000521977 NDUFA10O95299 355 aa10.25□□□□□ -0.77
SHPRH-209ENST00000521977 ASS1P00966 412 aaKnown RBP10.25□□□□□ -0.77
SHPRH-209ENST00000521977 MYCP01106 439 aaPredicted RBP10.25□□□□□ -0.77
SHPRH-209ENST00000521977 PLEKP08567 350 aaPredicted RBP10.25□□□□□ -0.77
SHPRH-209ENST00000521977 KCNE1P15382 129 aa10.25□□□□□ -0.77
SHPRH-209ENST00000521977 FERP16591 822 aa10.25□□□□□ -0.77
SHPRH-209ENST00000521977 CAPN2P17655 700 aa10.25□□□□□ -0.77
SHPRH-209ENST00000521977 ANXA13P27216 316 aa10.25□□□□□ -0.77
SHPRH-209ENST00000521977 CD52P31358 61 aa10.25□□□□□ -0.77
SHPRH-209ENST00000521977 CYLC1P35663 651 aaPredicted RBP10.25□□□□□ -0.77
SHPRH-209ENST00000521977 GJA8P48165 433 aa10.25□□□□□ -0.77
SHPRH-209ENST00000521977 YARSP54577 528 aaKnown RBP10.25□□□□□ -0.77
SHPRH-209ENST00000521977 TFAMQ00059 246 aaKnown RBP10.25□□□□□ -0.77
SHPRH-209ENST00000521977 PAK2Q13177 524 aa10.25□□□□□ -0.77
SHPRH-209ENST00000521977 MBTPS1Q14703 1052 aa10.25□□□□□ -0.77
SHPRH-209ENST00000521977 TMEM132DQ14C87 1099 aa10.25□□□□□ -0.77
SHPRH-209ENST00000521977 WDR44Q5JSH3 913 aa10.25□□□□□ -0.77
SHPRH-209ENST00000521977 SLC39A5Q6ZMH5 540 aa10.25□□□□□ -0.77
SHPRH-209ENST00000521977 ANKRD33Q7Z3H0 272 aa10.25□□□□□ -0.77
SHPRH-209ENST00000521977 MRPL10Q7Z7H8 261 aaKnown RBP10.25□□□□□ -0.77
SHPRH-209ENST00000521977 REXO1L1PQ8IX06 675 aa10.25□□□□□ -0.77
SHPRH-209ENST00000521977 FAM71AQ8IYT1 594 aa10.25□□□□□ -0.77
SHPRH-209ENST00000521977 PPM1KQ8N3J5 372 aa10.25□□□□□ -0.77
SHPRH-209ENST00000521977 ANKLE1Q8NAG6 615 aa10.25□□□□□ -0.77
SHPRH-209ENST00000521977 OLIG1Q8TAK6 271 aa10.25□□□□□ -0.77
SHPRH-209ENST00000521977 TAF4BQ92750 862 aa10.25□□□□□ -0.77
SHPRH-209ENST00000521977 KAT5Q92993 513 aa10.25□□□□□ -0.77
SHPRH-209ENST00000521977 SYT11Q9BT88 431 aa10.25□□□□□ -0.77
SHPRH-209ENST00000521977 PI4K2AQ9BTU6 479 aa10.25□□□□□ -0.77
SHPRH-209ENST00000521977 TRIM6Q9C030 488 aaPredicted RBP10.25□□□□□ -0.77
SHPRH-209ENST00000521977 XYLT2Q9H1B5 865 aa10.25□□□□□ -0.77
SHPRH-209ENST00000521977 CXCL16Q9H2A7 254 aa10.25□□□□□ -0.77
SHPRH-209ENST00000521977 VRTNQ9H8Y1 702 aa10.25□□□□□ -0.77
SHPRH-209ENST00000521977 RRAGDQ9NQL2 400 aaPredicted RBP10.25□□□□□ -0.77
SHPRH-209ENST00000521977 C1orf112Q9NSG2 853 aa10.25□□□□□ -0.77
SHPRH-209ENST00000521977 FAM105AQ9NUU6 356 aa10.25□□□□□ -0.77
SHPRH-209ENST00000521977 PPP2R2CQ9Y2T4 447 aa10.25□□□□□ -0.77
SHPRH-209ENST00000521977 HES2Q9Y543 173 aa10.25□□□□□ -0.77
SHPRH-209ENST00000521977 BZW2Q9Y6E2 419 aaKnown RBP10.25□□□□□ -0.77
SHPRH-209ENST00000521977 EPN1Q9Y6I3 576 aaPredicted RBP10.25□□□□□ -0.77
SHPRH-209ENST00000521977 TRIP11Q15643 1979 aa10.25□□□□□ -0.77
SHPRH-209ENST00000521977 USP27XA6NNY8 438 aa10.24□□□□□ -0.77
SHPRH-209ENST00000521977 RBAK-RBAKDNI3L0D1 243 aa10.24□□□□□ -0.77
SHPRH-209ENST00000521977 CCP110O43303 1012 aa10.24□□□□□ -0.77
SHPRH-209ENST00000521977 ZSCAN12O43309 604 aa10.24□□□□□ -0.77
SHPRH-209ENST00000521977 ZNF623O75123 536 aa10.24□□□□□ -0.77
SHPRH-209ENST00000521977 PHACTR2O75167 634 aa10.24□□□□□ -0.77
SHPRH-209ENST00000521977 STAU1O95793 577 aaKnown RBP10.24□□□□□ -0.77
SHPRH-209ENST00000521977 TFRCP02786 760 aaKnown RBP10.24□□□□□ -0.77
SHPRH-209ENST00000521977 PNMA6AP0CW24 399 aaPredicted RBP10.24□□□□□ -0.77
SHPRH-209ENST00000521977 TBXAS1P24557 533 aaPredicted RBP10.24□□□□□ -0.77
SHPRH-209ENST00000521977 ATICP31939 592 aa10.24□□□□□ -0.77
SHPRH-209ENST00000521977 EIF4A3P38919 411 aaKnown RBP10.24□□□□□ -0.77
SHPRH-209ENST00000521977 MYL6P60660 151 aa10.24□□□□□ -0.77
SHPRH-209ENST00000521977 NOP14P78316 857 aaKnown RBP10.24□□□□□ -0.77
SHPRH-209ENST00000521977 KLHL30Q0D2K2 578 aa10.24□□□□□ -0.77
SHPRH-209ENST00000521977 NFX1Q12986 1120 aaKnown RBP10.24□□□□□ -0.77
SHPRH-209ENST00000521977 BFSP2Q13515 415 aa10.24□□□□□ -0.77
SHPRH-209ENST00000521977 ARHGAP44Q17R89 818 aa10.24□□□□□ -0.77
SHPRH-209ENST00000521977 SGSM1Q2NKQ1 1148 aa10.24□□□□□ -0.77
SHPRH-209ENST00000521977 TWF2Q6IBS0 349 aaKnown RBP10.24□□□□□ -0.77
SHPRH-209ENST00000521977 SPOPLQ6IQ16 392 aa10.24□□□□□ -0.77
SHPRH-209ENST00000521977 ZNF662Q6ZS27 426 aa10.24□□□□□ -0.77
SHPRH-209ENST00000521977 FAM43BQ6ZT52 329 aaPredicted RBP10.24□□□□□ -0.77
SHPRH-209ENST00000521977 ZNF571Q7Z3V5 609 aaPredicted RBP10.24□□□□□ -0.77
SHPRH-209ENST00000521977 UBR7Q8N806 425 aa10.24□□□□□ -0.77
SHPRH-209ENST00000521977 PPP1R13BQ96KQ4 1090 aa10.24□□□□□ -0.77
SHPRH-209ENST00000521977 ZFRQ96KR1 1074 aaKnown RBP10.24□□□□□ -0.77
SHPRH-209ENST00000521977 CCDC42Q96M95 316 aa10.24□□□□□ -0.77
SHPRH-209ENST00000521977 ZMAT2Q96NC0 199 aaKnown RBP10.24□□□□□ -0.77
SHPRH-209ENST00000521977 TOX2Q96NM4 488 aa10.24□□□□□ -0.77
SHPRH-209ENST00000521977 HAUS4Q9H6D7 363 aa10.24□□□□□ -0.77
SHPRH-209ENST00000521977 ITGA11Q9UKX5 1188 aa10.24□□□□□ -0.77
SHPRH-209ENST00000521977 NENFQ9UMX5 172 aa10.24□□□□□ -0.77
SHPRH-209ENST00000521977 CNTN6Q9UQ52 1028 aa10.24□□□□□ -0.77
SHPRH-209ENST00000521977 REXO2Q9Y3B8 237 aaKnown RBP10.24□□□□□ -0.77
SHPRH-209ENST00000521977 NUB1Q9Y5A7 615 aa10.24□□□□□ -0.77
SHPRH-209ENST00000521977 PCDHB2Q9Y5E7 798 aa10.24□□□□□ -0.77
SHPRH-209ENST00000521977 A0A0U1RQF3 1178 aa10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms