RNA–Protein interactions for RNA: ENST00000521713.1

USP42-207, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 5

Gene USP42, Length 5,017 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-207ENST00000521713 CDH6P55285 790 aa17.06■□□□□ 0.32
USP42-207ENST00000521713 LRRC43Q8N309 656 aa17.06■□□□□ 0.32
USP42-207ENST00000521713 SCG3Q8WXD2 468 aaKnown RBP17.06■□□□□ 0.32
USP42-207ENST00000521713 ETNK1Q9HBU6 452 aa17.06■□□□□ 0.32
USP42-207ENST00000521713 BFARQ9NZS9 450 aa17.06■□□□□ 0.32
USP42-207ENST00000521713 TBK1Q9UHD2 729 aa17.06■□□□□ 0.32
USP42-207ENST00000521713 SLC37A4O43826 429 aa17.05■□□□□ 0.32
USP42-207ENST00000521713 UCHL3P15374 230 aa17.05■□□□□ 0.32
USP42-207ENST00000521713 ACADSBP45954 432 aa17.05■□□□□ 0.32
USP42-207ENST00000521713 RAD23BP54727 409 aa17.05■□□□□ 0.32
USP42-207ENST00000521713 CUL3Q13618 768 aa17.05■□□□□ 0.32
USP42-207ENST00000521713 DACT3Q96B18 629 aaPredicted RBP17.05■□□□□ 0.32
USP42-207ENST00000521713 PXMP2Q9NR77 195 aa17.05■□□□□ 0.32
USP42-207ENST00000521713 PCDHB2Q9Y5E7 798 aa17.05■□□□□ 0.32
USP42-207ENST00000521713 MAN1A2O60476 641 aa17.05■□□□□ 0.32
USP42-207ENST00000521713 MDH1P40925 334 aaKnown RBP17.05■□□□□ 0.32
USP42-207ENST00000521713 PMS2P54278 862 aa17.05■□□□□ 0.32
USP42-207ENST00000521713 PDCD6IPQ8WUM4 868 aaKnown RBP17.05■□□□□ 0.32
USP42-207ENST00000521713 NIF3L1Q9GZT8 377 aa17.05■□□□□ 0.32
USP42-207ENST00000521713 TBX20Q9UMR3 447 aa17.05■□□□□ 0.32
USP42-207ENST00000521713 PDHA1P08559 390 aa17.05■□□□□ 0.32
USP42-207ENST00000521713 THPOP40225 353 aa17.05■□□□□ 0.32
USP42-207ENST00000521713 KRT33BQ14525 404 aa17.05■□□□□ 0.32
USP42-207ENST00000521713 METTL7BQ6UX53 244 aa17.05■□□□□ 0.32
USP42-207ENST00000521713 HNRNPLLQ8WVV9 542 aaKnown RBP17.05■□□□□ 0.32
USP42-207ENST00000521713 GLIS2Q9BZE0 524 aaPredicted RBP17.05■□□□□ 0.32
USP42-207ENST00000521713 PCDHB7Q9Y5E2 793 aa17.05■□□□□ 0.32
USP42-207ENST00000521713 HOXA2O43364 376 aa17.05■□□□□ 0.32
USP42-207ENST00000521713 KRT38O76015 456 aa17.05■□□□□ 0.32
USP42-207ENST00000521713 VIL1P09327 827 aaKnown RBP17.05■□□□□ 0.32
USP42-207ENST00000521713 NAMPTP43490 491 aa17.05■□□□□ 0.32
USP42-207ENST00000521713 NOP14P78316 857 aaKnown RBP17.05■□□□□ 0.32
USP42-207ENST00000521713 Q4G0T1 1027 aa17.05■□□□□ 0.32
USP42-207ENST00000521713 DCLK2Q8N568 766 aa17.05■□□□□ 0.32
USP42-207ENST00000521713 AKT1S1Q96B36 256 aa17.05■□□□□ 0.32
USP42-207ENST00000521713 SAYSD1Q9NPB0 183 aa17.05■□□□□ 0.32
USP42-207ENST00000521713 H0Y3Z8 333 aa17.04■□□□□ 0.32
USP42-207ENST00000521713 PPP1R12AO14974 1030 aaPredicted RBP17.04■□□□□ 0.32
USP42-207ENST00000521713 FOXP2O15409 715 aa17.04■□□□□ 0.32
USP42-207ENST00000521713 HOXC6P09630 235 aa17.04■□□□□ 0.32
USP42-207ENST00000521713 EEF1B2P24534 225 aaKnown RBP17.04■□□□□ 0.32
USP42-207ENST00000521713 OR1G1P47890 313 aa17.04■□□□□ 0.32
USP42-207ENST00000521713 C16orf87Q6PH81 154 aa17.04■□□□□ 0.32
USP42-207ENST00000521713 CATSPER1Q8NEC5 780 aa17.04■□□□□ 0.32
USP42-207ENST00000521713 MAML1Q92585 1016 aa17.04■□□□□ 0.32
USP42-207ENST00000521713 SNX24Q9Y343 169 aa17.04■□□□□ 0.32
USP42-207ENST00000521713 NPTXRO95502 500 aa17.04■□□□□ 0.32
USP42-207ENST00000521713 PSMD7P51665 324 aa17.04■□□□□ 0.32
USP42-207ENST00000521713 BUD13Q9BRD0 619 aaKnown RBP eCLIP17.04■□□□□ 0.32
USP42-207ENST00000521713 FHDC1Q9C0D6 1143 aaPredicted RBP17.04■□□□□ 0.32
USP42-207ENST00000521713 ITIH6Q6UXX5 1313 aa17.04■□□□□ 0.32
USP42-207ENST00000521713 PRRG1O14668 218 aa17.04■□□□□ 0.32
USP42-207ENST00000521713 OGTO15294 1046 aa17.04■□□□□ 0.32
USP42-207ENST00000521713 CCND1P24385 295 aa17.04■□□□□ 0.32
USP42-207ENST00000521713 TAF6P49848 677 aa17.04■□□□□ 0.32
USP42-207ENST00000521713 MAPRE1Q15691 268 aaKnown RBP17.04■□□□□ 0.32
USP42-207ENST00000521713 ANLNQ9NQW6 1124 aa17.04■□□□□ 0.32
USP42-207ENST00000521713 PAIP2BQ9ULR5 123 aaKnown RBP17.04■□□□□ 0.32
USP42-207ENST00000521713 SATB2Q9UPW6 733 aa17.04■□□□□ 0.32
USP42-207ENST00000521713 ARP10275 920 aa17.04■□□□□ 0.32
USP42-207ENST00000521713 VSNL1P62760 191 aa17.04■□□□□ 0.32
USP42-207ENST00000521713 KRT17Q04695 432 aa17.04■□□□□ 0.32
USP42-207ENST00000521713 SLC18A3Q16572 532 aa17.04■□□□□ 0.32
USP42-207ENST00000521713 EPM2AIP1Q7L775 607 aaPredicted RBP17.04■□□□□ 0.32
USP42-207ENST00000521713 FBXO16Q8IX29 292 aaPredicted RBP17.04■□□□□ 0.32
USP42-207ENST00000521713 SPDYE1Q8NFV5 336 aaPredicted RBP17.04■□□□□ 0.32
USP42-207ENST00000521713 PPME1Q9Y570 386 aa17.04■□□□□ 0.32
USP42-207ENST00000521713 NFIBO00712 420 aa17.03■□□□□ 0.32
USP42-207ENST00000521713 CHEK2O96017 543 aa17.03■□□□□ 0.32
USP42-207ENST00000521713 ROR1Q01973 937 aa17.03■□□□□ 0.32
USP42-207ENST00000521713 ADCY1Q08828 1119 aa17.03■□□□□ 0.32
USP42-207ENST00000521713 COLEC11Q9BWP8 271 aa17.03■□□□□ 0.32
USP42-207ENST00000521713 KCNF1Q9H3M0 494 aa17.03■□□□□ 0.32
USP42-207ENST00000521713 PLEKHA5Q9HAU0 1116 aa17.03■□□□□ 0.32
USP42-207ENST00000521713 ZC4H2Q9NQZ6 224 aa17.03■□□□□ 0.32
USP42-207ENST00000521713 RASA4BC9J798 803 aa17.03■□□□□ 0.32
USP42-207ENST00000521713 RASA4O43374 803 aa17.03■□□□□ 0.32
USP42-207ENST00000521713 PDGFRAP16234 1089 aa17.03■□□□□ 0.32
USP42-207ENST00000521713 MRPS35P82673 323 aaKnown RBP17.03■□□□□ 0.32
USP42-207ENST00000521713 KLC1Q07866 573 aa17.03■□□□□ 0.32
USP42-207ENST00000521713 BYSLQ13895 437 aaKnown RBP17.03■□□□□ 0.32
USP42-207ENST00000521713 ZNF235Q14590 738 aa17.03■□□□□ 0.32
USP42-207ENST00000521713 KLHL38Q2WGJ6 581 aa17.03■□□□□ 0.32
USP42-207ENST00000521713 STKLD1Q8NE28 680 aa17.03■□□□□ 0.32
USP42-207ENST00000521713 ZNF473Q8WTR7 871 aaKnown RBP17.03■□□□□ 0.32
USP42-207ENST00000521713 ASIC4Q96FT7 647 aa17.03■□□□□ 0.32
USP42-207ENST00000521713 FAM167BQ9BTA0 163 aa17.03■□□□□ 0.32
USP42-207ENST00000521713 GNGT2O14610 69 aa17.03■□□□□ 0.32
USP42-207ENST00000521713 TAC1P20366 129 aa17.03■□□□□ 0.32
USP42-207ENST00000521713 TM4SF1P30408 202 aa17.03■□□□□ 0.32
USP42-207ENST00000521713 C1orf146Q5VVC0 180 aa17.03■□□□□ 0.32
USP42-207ENST00000521713 CYTH2Q99418 400 aa17.03■□□□□ 0.32
USP42-207ENST00000521713 TOM1L1O75674 476 aa17.03■□□□□ 0.32
USP42-207ENST00000521713 INHBEP58166 350 aa17.03■□□□□ 0.32
USP42-207ENST00000521713 CCZ1BP86790 482 aa17.03■□□□□ 0.32
USP42-207ENST00000521713 CCZ1P86791 482 aaPredicted RBP17.03■□□□□ 0.32
USP42-207ENST00000521713 ACCSLQ4AC99 568 aa17.03■□□□□ 0.32
USP42-207ENST00000521713 FAM117BQ6P1L5 589 aa17.03■□□□□ 0.32
USP42-207ENST00000521713 TRAPPC11Q7Z392 1133 aa17.03■□□□□ 0.32
USP42-207ENST00000521713 AGGF1Q8N302 714 aaeCLIP17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms