RNA–Protein interactions for RNA: ENST00000521646.1

CSMD1-210, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 5

Gene CSMD1, Length 1,003 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-210ENST00000521646 HOXC13P31276 330 aa12.24□□□□□ -0.45
CSMD1-210ENST00000521646 KRT2P35908 639 aa12.24□□□□□ -0.45
CSMD1-210ENST00000521646 STARD6P59095 220 aa12.24□□□□□ -0.45
CSMD1-210ENST00000521646 TUSC3Q13454 348 aa12.24□□□□□ -0.45
CSMD1-210ENST00000521646 CALCRLQ16602 461 aa12.24□□□□□ -0.45
CSMD1-210ENST00000521646 NT5DC1Q5TFE4 455 aa12.24□□□□□ -0.45
CSMD1-210ENST00000521646 FAM171A1Q5VUB5 890 aa12.24□□□□□ -0.45
CSMD1-210ENST00000521646 DCLRE1AQ6PJP8 1040 aa12.24□□□□□ -0.45
CSMD1-210ENST00000521646 CYP26C1Q6V0L0 522 aa12.24□□□□□ -0.45
CSMD1-210ENST00000521646 CEP57Q86XR8 500 aa12.24□□□□□ -0.45
CSMD1-210ENST00000521646 NPAS3Q8IXF0 933 aa12.24□□□□□ -0.45
CSMD1-210ENST00000521646 CEP120Q8N960 986 aa12.24□□□□□ -0.45
CSMD1-210ENST00000521646 ING5Q8WYH8 240 aa12.24□□□□□ -0.45
CSMD1-210ENST00000521646 PIDD1Q9HB75 910 aa12.24□□□□□ -0.45
CSMD1-210ENST00000521646 STK39Q9UEW8 545 aa12.24□□□□□ -0.45
CSMD1-210ENST00000521646 PCDHA12Q9UN75 941 aa12.24□□□□□ -0.45
CSMD1-210ENST00000521646 SIT1Q9Y3P8 196 aa12.24□□□□□ -0.45
CSMD1-210ENST00000521646 DKC1O60832 514 aaKnown RBP eCLIP12.23□□□□□ -0.45
CSMD1-210ENST00000521646 LMNAP02545 664 aaKnown RBP12.23□□□□□ -0.45
CSMD1-210ENST00000521646 C8AP07357 584 aa12.23□□□□□ -0.45
CSMD1-210ENST00000521646 TKTP29401 623 aaKnown RBP12.23□□□□□ -0.45
CSMD1-210ENST00000521646 TFDP1Q14186 410 aa12.23□□□□□ -0.45
CSMD1-210ENST00000521646 PCBP1Q15365 356 aaKnown RBP eCLIP12.23□□□□□ -0.45
CSMD1-210ENST00000521646 PSMD5Q16401 504 aa12.23□□□□□ -0.45
CSMD1-210ENST00000521646 FAM187BQ17R55 369 aa12.23□□□□□ -0.45
CSMD1-210ENST00000521646 PPP1R26Q5T8A7 1209 aaPredicted RBP12.23□□□□□ -0.45
CSMD1-210ENST00000521646 TAS1R3Q7RTX0 852 aa12.23□□□□□ -0.45
CSMD1-210ENST00000521646 C1orf210Q8IVY1 113 aa12.23□□□□□ -0.45
CSMD1-210ENST00000521646 DIS3L2Q8IYB7 885 aaKnown RBP12.23□□□□□ -0.45
CSMD1-210ENST00000521646 GPR65Q8IYL9 337 aa12.23□□□□□ -0.45
CSMD1-210ENST00000521646 SLFN12Q8IYM2 578 aa12.23□□□□□ -0.45
CSMD1-210ENST00000521646 SLC7A14Q8TBB6 771 aa12.23□□□□□ -0.45
CSMD1-210ENST00000521646 STAMQ92783 540 aa12.23□□□□□ -0.45
CSMD1-210ENST00000521646 GTF3C6Q969F1 213 aa12.23□□□□□ -0.45
CSMD1-210ENST00000521646 PPP1R10Q96QC0 940 aaKnown RBP12.23□□□□□ -0.45
CSMD1-210ENST00000521646 TTPALQ9BTX7 342 aa12.23□□□□□ -0.45
CSMD1-210ENST00000521646 TRIM6Q9C030 488 aaPredicted RBP12.23□□□□□ -0.45
CSMD1-210ENST00000521646 PGPEP1Q9NXJ5 209 aa12.23□□□□□ -0.45
CSMD1-210ENST00000521646 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP12.23□□□□□ -0.45
CSMD1-210ENST00000521646 CDH7Q9ULB5 785 aa12.23□□□□□ -0.45
CSMD1-210ENST00000521646 SSX2IPQ9Y2D8 614 aa12.23□□□□□ -0.45
CSMD1-210ENST00000521646 ZMYM2Q9UBW7 1377 aa12.22□□□□□ -0.45
CSMD1-210ENST00000521646 SF3B1O75533 1304 aaKnown RBP eCLIP12.22□□□□□ -0.45
CSMD1-210ENST00000521646 TERTO14746 1132 aaKnown RBP12.22□□□□□ -0.45
CSMD1-210ENST00000521646 EPB41L2O43491 1005 aaKnown RBP12.22□□□□□ -0.45
CSMD1-210ENST00000521646 NEMFO60524 1076 aa12.22□□□□□ -0.45
CSMD1-210ENST00000521646 TADA2AO75478 443 aa12.22□□□□□ -0.45
CSMD1-210ENST00000521646 C1RP00736 705 aa12.22□□□□□ -0.45
CSMD1-210ENST00000521646 BMP2P12643 396 aa12.22□□□□□ -0.45
CSMD1-210ENST00000521646 FGFR3P22607 806 aa12.22□□□□□ -0.45
CSMD1-210ENST00000521646 FCARP24071 287 aa12.22□□□□□ -0.45
CSMD1-210ENST00000521646 CCR2P41597 374 aa12.22□□□□□ -0.45
CSMD1-210ENST00000521646 BRCC3P46736 316 aa12.22□□□□□ -0.45
CSMD1-210ENST00000521646 CLCNKBP51801 687 aa12.22□□□□□ -0.45
CSMD1-210ENST00000521646 GUCY1B3Q02153 619 aa12.22□□□□□ -0.45
CSMD1-210ENST00000521646 TSSK4Q6SA08 328 aa12.22□□□□□ -0.45
CSMD1-210ENST00000521646 EXOC8Q8IYI6 725 aa12.22□□□□□ -0.45
CSMD1-210ENST00000521646 ZMAT2Q96NC0 199 aaKnown RBP12.22□□□□□ -0.45
CSMD1-210ENST00000521646 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP12.22□□□□□ -0.45
CSMD1-210ENST00000521646 GDAQ9Y2T3 454 aa12.22□□□□□ -0.45
CSMD1-210ENST00000521646 CFAP47Q6ZTR5 3102 aa12.21□□□□□ -0.45
CSMD1-210ENST00000521646 F5P12259 2224 aa12.21□□□□□ -0.45
CSMD1-210ENST00000521646 ABLIM1O14639 778 aa12.21□□□□□ -0.45
CSMD1-210ENST00000521646 CEBPBP17676 345 aa12.21□□□□□ -0.45
CSMD1-210ENST00000521646 LIG1P18858 919 aa12.21□□□□□ -0.45
CSMD1-210ENST00000521646 ATP2B1P20020 1258 aa12.21□□□□□ -0.45
CSMD1-210ENST00000521646 TGM1P22735 817 aa12.21□□□□□ -0.45
CSMD1-210ENST00000521646 TARSP26639 723 aaKnown RBP12.21□□□□□ -0.45
CSMD1-210ENST00000521646 MCM7P33993 719 aa12.21□□□□□ -0.45
CSMD1-210ENST00000521646 OR1D2P34982 312 aa12.21□□□□□ -0.45
CSMD1-210ENST00000521646 RAB33AQ14088 237 aa12.21□□□□□ -0.45
CSMD1-210ENST00000521646 WDR44Q5JSH3 913 aa12.21□□□□□ -0.45
CSMD1-210ENST00000521646 AXDND1Q5T1B0 1012 aaPredicted RBP12.21□□□□□ -0.45
CSMD1-210ENST00000521646 CPLX2Q6PUV4 134 aaKnown RBP12.21□□□□□ -0.45
CSMD1-210ENST00000521646 ERMP1Q7Z2K6 904 aa12.21□□□□□ -0.45
CSMD1-210ENST00000521646 DAW1Q8N136 415 aa12.21□□□□□ -0.45
CSMD1-210ENST00000521646 C4orf32Q8N8J7 132 aa12.21□□□□□ -0.45
CSMD1-210ENST00000521646 KCNG4Q8TDN1 519 aa12.21□□□□□ -0.45
CSMD1-210ENST00000521646 NXPE3Q969Y0 559 aa12.21□□□□□ -0.45
CSMD1-210ENST00000521646 TCEAL4Q96EI5 215 aa12.21□□□□□ -0.45
CSMD1-210ENST00000521646 MTRRQ9UBK8 725 aa12.21□□□□□ -0.45
CSMD1-210ENST00000521646 MARCH6O60337 910 aa12.2□□□□□ -0.46
CSMD1-210ENST00000521646 TBC1D4O60343 1298 aa12.2□□□□□ -0.46
CSMD1-210ENST00000521646 MOSPD3O75425 235 aa12.2□□□□□ -0.46
CSMD1-210ENST00000521646 CDKL5O76039 1030 aa12.2□□□□□ -0.46
CSMD1-210ENST00000521646 SEC24AO95486 1093 aa12.2□□□□□ -0.46
CSMD1-210ENST00000521646 VNN2O95498 520 aa12.2□□□□□ -0.46
CSMD1-210ENST00000521646 PRKCBP05771 671 aa12.2□□□□□ -0.46
CSMD1-210ENST00000521646 THP07101 528 aa12.2□□□□□ -0.46
CSMD1-210ENST00000521646 TDGF1P13385 188 aa12.2□□□□□ -0.46
CSMD1-210ENST00000521646 RAB15P59190 212 aa12.2□□□□□ -0.46
CSMD1-210ENST00000521646 FOXK2Q01167 660 aa12.2□□□□□ -0.46
CSMD1-210ENST00000521646 DHX9Q08211 1270 aaKnown RBP12.2□□□□□ -0.46
CSMD1-210ENST00000521646 MLF2Q15773 248 aaPredicted RBP12.2□□□□□ -0.46
CSMD1-210ENST00000521646 UPP1Q16831 310 aa12.2□□□□□ -0.46
CSMD1-210ENST00000521646 SLC44A4Q53GD3 710 aa12.2□□□□□ -0.46
CSMD1-210ENST00000521646 PPM1LQ5SGD2 360 aa12.2□□□□□ -0.46
CSMD1-210ENST00000521646 TANGO2Q6ICL3 276 aa12.2□□□□□ -0.46
CSMD1-210ENST00000521646 NELL1Q92832 810 aa12.2□□□□□ -0.46
CSMD1-210ENST00000521646 LTB4R2Q9NPC1 389 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms