RNA–Protein interactions for RNA: ENST00000520878.5

CLK4-206, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 3,722 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-206ENST00000520878 RNPEPQ9H4A4 650 aa12.1□□□□□ -0.47
CLK4-206ENST00000520878 GDF3Q9NR23 364 aa12.1□□□□□ -0.47
CLK4-206ENST00000520878 PCSK1NQ9UHG2 260 aa12.1□□□□□ -0.47
CLK4-206ENST00000520878 ADAMTS5Q9UNA0 930 aa12.1□□□□□ -0.47
CLK4-206ENST00000520878 TCRBV7S2A1N4TA0A589 114 aa12.09□□□□□ -0.47
CLK4-206ENST00000520878 SPDYE5A6NIY4 337 aa12.09□□□□□ -0.47
CLK4-206ENST00000520878 KRT1P04264 644 aa12.09□□□□□ -0.47
CLK4-206ENST00000520878 IVLP07476 585 aa12.09□□□□□ -0.47
CLK4-206ENST00000520878 CFHP08603 1231 aa12.09□□□□□ -0.47
CLK4-206ENST00000520878 CLTAP09496 248 aa12.09□□□□□ -0.47
CLK4-206ENST00000520878 NR1D1P20393 614 aa12.09□□□□□ -0.47
CLK4-206ENST00000520878 FLT3P36888 993 aa12.09□□□□□ -0.47
CLK4-206ENST00000520878 YARSP54577 528 aaKnown RBP12.09□□□□□ -0.47
CLK4-206ENST00000520878 GCNT1Q02742 428 aa12.09□□□□□ -0.47
CLK4-206ENST00000520878 MTMR3Q13615 1198 aa12.09□□□□□ -0.47
CLK4-206ENST00000520878 NOL9Q5SY16 702 aaKnown RBP12.09□□□□□ -0.47
CLK4-206ENST00000520878 KCNV1Q6PIU1 500 aa12.09□□□□□ -0.47
CLK4-206ENST00000520878 MCOLN2Q8IZK6 566 aa12.09□□□□□ -0.47
CLK4-206ENST00000520878 TRIM11Q96F44 468 aa12.09□□□□□ -0.47
CLK4-206ENST00000520878 FAM81BQ96LP2 452 aa12.09□□□□□ -0.47
CLK4-206ENST00000520878 PCYT2Q99447 389 aa12.09□□□□□ -0.47
CLK4-206ENST00000520878 CGRRF1Q99675 332 aa12.09□□□□□ -0.47
CLK4-206ENST00000520878 ERP44Q9BS26 406 aa12.09□□□□□ -0.47
CLK4-206ENST00000520878 NOCTQ9UK39 431 aaKnown RBP12.09□□□□□ -0.47
CLK4-206ENST00000520878 DIS3Q9Y2L1 958 aaKnown RBP12.09□□□□□ -0.47
CLK4-206ENST00000520878 E7EVH7 732 aa12.09□□□□□ -0.47
CLK4-206ENST00000520878 MAFO75444 373 aaPredicted RBP12.09□□□□□ -0.47
CLK4-206ENST00000520878 PLCB4Q15147 1175 aa12.09□□□□□ -0.47
CLK4-206ENST00000520878 SH3D19Q5HYK7 790 aa12.09□□□□□ -0.47
CLK4-206ENST00000520878 SLC13A5Q86YT5 568 aaPredicted RBP12.09□□□□□ -0.47
CLK4-206ENST00000520878 FBXO25Q8TCJ0 367 aa12.09□□□□□ -0.47
CLK4-206ENST00000520878 ZNF606Q8WXB4 792 aa12.09□□□□□ -0.47
CLK4-206ENST00000520878 MCEEQ96PE7 176 aa12.09□□□□□ -0.47
CLK4-206ENST00000520878 GPR20Q99678 358 aa12.09□□□□□ -0.47
CLK4-206ENST00000520878 TTC7AQ9ULT0 858 aaPredicted RBP12.09□□□□□ -0.47
CLK4-206ENST00000520878 QSER1Q2KHR3 1735 aa12.09□□□□□ -0.47
CLK4-206ENST00000520878 PTPRJQ12913 1337 aa12.09□□□□□ -0.47
CLK4-206ENST00000520878 A0A0B4J269 797 aa12.09□□□□□ -0.47
CLK4-206ENST00000520878 H0YHG0 523 aa12.09□□□□□ -0.47
CLK4-206ENST00000520878 EBAG9O00559 213 aa12.09□□□□□ -0.47
CLK4-206ENST00000520878 MAPK13O15264 365 aa12.09□□□□□ -0.47
CLK4-206ENST00000520878 ARL2P36404 184 aa12.09□□□□□ -0.47
CLK4-206ENST00000520878 CATSPER4Q7RTX7 472 aa12.09□□□□□ -0.47
CLK4-206ENST00000520878 MGARPQ8TDB4 240 aa12.09□□□□□ -0.47
CLK4-206ENST00000520878 MROH8Q9H579 483 aa12.09□□□□□ -0.47
CLK4-206ENST00000520878 KCNK9Q9NPC2 374 aa12.09□□□□□ -0.47
CLK4-206ENST00000520878 CISHQ9NSE2 258 aa12.09□□□□□ -0.47
CLK4-206ENST00000520878 POLIQ9UNA4 740 aa12.09□□□□□ -0.47
CLK4-206ENST00000520878 AGAP1Q9UPQ3 857 aa12.09□□□□□ -0.47
CLK4-206ENST00000520878 FOCADQ5VW36 1801 aa12.09□□□□□ -0.47
CLK4-206ENST00000520878 KIAA0754O94854 1291 aa12.08□□□□□ -0.48
CLK4-206ENST00000520878 ITGB3P05106 788 aa12.08□□□□□ -0.48
CLK4-206ENST00000520878 CHRNA3P32297 505 aa12.08□□□□□ -0.48
CLK4-206ENST00000520878 CDO1Q16878 200 aa12.08□□□□□ -0.48
CLK4-206ENST00000520878 KIZQ2M2Z5 673 aa12.08□□□□□ -0.48
CLK4-206ENST00000520878 APOBEC3GQ9HC16 384 aaKnown RBP12.08□□□□□ -0.48
CLK4-206ENST00000520878 A0A0G2JLL6 359 aaPredicted RBP12.08□□□□□ -0.48
CLK4-206ENST00000520878 AGPSO00116 658 aa12.08□□□□□ -0.48
CLK4-206ENST00000520878 DDX3YO15523 660 aaKnown RBP12.08□□□□□ -0.48
CLK4-206ENST00000520878 PHF2O75151 1096 aa12.08□□□□□ -0.48
CLK4-206ENST00000520878 RALAP11233 206 aa12.08□□□□□ -0.48
CLK4-206ENST00000520878 KRT10P13645 584 aa12.08□□□□□ -0.48
CLK4-206ENST00000520878 ICAM3P32942 547 aa12.08□□□□□ -0.48
CLK4-206ENST00000520878 MTM1Q13496 603 aa12.08□□□□□ -0.48
CLK4-206ENST00000520878 SGSM1Q2NKQ1 1148 aa12.08□□□□□ -0.48
CLK4-206ENST00000520878 PRAMEF19Q5SWL8 479 aa12.08□□□□□ -0.48
CLK4-206ENST00000520878 PRRT2Q7Z6L0 340 aaPredicted RBP12.08□□□□□ -0.48
CLK4-206ENST00000520878 ARFGAP2Q8N6H7 521 aa12.08□□□□□ -0.48
CLK4-206ENST00000520878 PAIP2Q9BPZ3 127 aaKnown RBP12.08□□□□□ -0.48
CLK4-206ENST00000520878 NEUROG2Q9H2A3 272 aa12.08□□□□□ -0.48
CLK4-206ENST00000520878 KIAA0391O15091 583 aaKnown RBP12.08□□□□□ -0.48
CLK4-206ENST00000520878 RGS16O15492 202 aaPredicted RBP12.08□□□□□ -0.48
CLK4-206ENST00000520878 GH1P01241 217 aa12.08□□□□□ -0.48
CLK4-206ENST00000520878 C4BPAP04003 597 aaKnown RBP12.08□□□□□ -0.48
CLK4-206ENST00000520878 RARAP10276 462 aa12.08□□□□□ -0.48
CLK4-206ENST00000520878 ATF2P15336 505 aa12.08□□□□□ -0.48
CLK4-206ENST00000520878 HSPA6P17066 643 aa12.08□□□□□ -0.48
CLK4-206ENST00000520878 RTP1P59025 263 aa12.08□□□□□ -0.48
CLK4-206ENST00000520878 GHRHRQ02643 423 aa12.08□□□□□ -0.48
CLK4-206ENST00000520878 PPIL2Q13356 520 aa12.08□□□□□ -0.48
CLK4-206ENST00000520878 CLUL1Q15846 466 aa12.08□□□□□ -0.48
CLK4-206ENST00000520878 SMTNL2Q2TAL5 461 aa12.08□□□□□ -0.48
CLK4-206ENST00000520878 ATP13A4Q4VNC1 1196 aa12.08□□□□□ -0.48
CLK4-206ENST00000520878 DCAF12L1Q5VU92 463 aa12.08□□□□□ -0.48
CLK4-206ENST00000520878 CYP4F22Q6NT55 531 aa12.08□□□□□ -0.48
CLK4-206ENST00000520878 NCANO14594 1321 aa12.07□□□□□ -0.48
CLK4-206ENST00000520878 ARFGEF1Q9Y6D6 1849 aa12.07□□□□□ -0.48
CLK4-206ENST00000520878 STBD1O95210 358 aa12.07□□□□□ -0.48
CLK4-206ENST00000520878 CELF2O95319 508 aaKnown RBP12.07□□□□□ -0.48
CLK4-206ENST00000520878 YBX3P16989 372 aaKnown RBP eCLIP12.07□□□□□ -0.48
CLK4-206ENST00000520878 MAGOHP61326 146 aaKnown RBP12.07□□□□□ -0.48
CLK4-206ENST00000520878 KRT17Q04695 432 aa12.07□□□□□ -0.48
CLK4-206ENST00000520878 GLRA4Q5JXX5 417 aa12.07□□□□□ -0.48
CLK4-206ENST00000520878 SLFN11Q7Z7L1 901 aa12.07□□□□□ -0.48
CLK4-206ENST00000520878 EXOC8Q8IYI6 725 aa12.07□□□□□ -0.48
CLK4-206ENST00000520878 TMEM130Q8N3G9 435 aa12.07□□□□□ -0.48
CLK4-206ENST00000520878 OR6J1Q8NGC5 347 aa12.07□□□□□ -0.48
CLK4-206ENST00000520878 UPF1Q92900 1129 aaKnown RBP eCLIP12.07□□□□□ -0.48
CLK4-206ENST00000520878 RPS6KC1Q96S38 1066 aa12.07□□□□□ -0.48
CLK4-206ENST00000520878 NIF3L1Q9GZT8 377 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms