RNA–Protein interactions for RNA: ENST00000519661.5

SPIDR-212, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 2

Gene SPIDR, Length 1,035 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-212ENST00000519661 MTRRQ9UBK8 725 aa12.5□□□□□ -0.41
SPIDR-212ENST00000519661 CACNG4Q9UBN1 327 aa12.5□□□□□ -0.41
SPIDR-212ENST00000519661 MAFFQ9ULX9 164 aa12.5□□□□□ -0.41
SPIDR-212ENST00000519661 PCDHA5Q9Y5H7 936 aa12.5□□□□□ -0.41
SPIDR-212ENST00000519661 ANK1P16157 1881 aa12.5□□□□□ -0.41
SPIDR-212ENST00000519661 TRIP11Q15643 1979 aa12.49□□□□□ -0.41
SPIDR-212ENST00000519661 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP12.49□□□□□ -0.41
SPIDR-212ENST00000519661 GRXCR2A6NFK2 248 aa12.49□□□□□ -0.41
SPIDR-212ENST00000519661 ZNF233A6NK53 670 aa12.49□□□□□ -0.41
SPIDR-212ENST00000519661 TEX28O15482 410 aa12.49□□□□□ -0.41
SPIDR-212ENST00000519661 KINO60870 393 aaKnown RBP12.49□□□□□ -0.41
SPIDR-212ENST00000519661 PRPF40AO75400 957 aaKnown RBP12.49□□□□□ -0.41
SPIDR-212ENST00000519661 SMC2O95347 1197 aa12.49□□□□□ -0.41
SPIDR-212ENST00000519661 STAU1O95793 577 aaKnown RBP12.49□□□□□ -0.41
SPIDR-212ENST00000519661 CYP11A1P05108 521 aa12.49□□□□□ -0.41
SPIDR-212ENST00000519661 ADH1AP07327 375 aa12.49□□□□□ -0.41
SPIDR-212ENST00000519661 SRGAP2BP0DMP2 458 aa12.49□□□□□ -0.41
SPIDR-212ENST00000519661 TYMPP19971 482 aa12.49□□□□□ -0.41
SPIDR-212ENST00000519661 GTF2F1P35269 517 aaKnown RBP eCLIP12.49□□□□□ -0.412e-13■■■■□ 26.1
SPIDR-212ENST00000519661 PPP1R2P41236 205 aa12.49□□□□□ -0.41
SPIDR-212ENST00000519661 NDUFV1P49821 464 aa12.49□□□□□ -0.41
SPIDR-212ENST00000519661 LILRA4P59901 499 aa12.49□□□□□ -0.41
SPIDR-212ENST00000519661 DLX2Q07687 328 aaPredicted RBP12.49□□□□□ -0.41
SPIDR-212ENST00000519661 SMAD4Q13485 552 aaKnown RBP12.49□□□□□ -0.41
SPIDR-212ENST00000519661 RAB33AQ14088 237 aa12.49□□□□□ -0.41
SPIDR-212ENST00000519661 SMAD2Q15796 467 aaKnown RBP12.49□□□□□ -0.41
SPIDR-212ENST00000519661 ZNF658Q5TYW1 1059 aaPredicted RBP12.49□□□□□ -0.41
SPIDR-212ENST00000519661 C9orf57Q5W0N0 161 aa12.49□□□□□ -0.41
SPIDR-212ENST00000519661 CENPPQ6IPU0 288 aa12.49□□□□□ -0.41
SPIDR-212ENST00000519661 SYCE2Q6PIF2 218 aa12.49□□□□□ -0.41
SPIDR-212ENST00000519661 ANKS3Q6ZW76 656 aa12.49□□□□□ -0.41
SPIDR-212ENST00000519661 CBWD2Q8IUF1 395 aa12.49□□□□□ -0.41
SPIDR-212ENST00000519661 WDR49Q8IV35 697 aa12.49□□□□□ -0.41
SPIDR-212ENST00000519661 LRRC52Q8N7C0 313 aa12.49□□□□□ -0.41
SPIDR-212ENST00000519661 GADD45GIP1Q8TAE8 222 aaPredicted RBP12.49□□□□□ -0.41
SPIDR-212ENST00000519661 MICAL1Q8TDZ2 1067 aa12.49□□□□□ -0.41
SPIDR-212ENST00000519661 FAM213AQ9BRX8 229 aa12.49□□□□□ -0.41
SPIDR-212ENST00000519661 DPP7Q9UHL4 492 aa12.49□□□□□ -0.41
SPIDR-212ENST00000519661 ITGA11Q9UKX5 1188 aa12.49□□□□□ -0.41
SPIDR-212ENST00000519661 PCDHB8Q9UN66 801 aa12.49□□□□□ -0.41
SPIDR-212ENST00000519661 LINC01565O15544 149 aa12.48□□□□□ -0.41
SPIDR-212ENST00000519661 HOXA9P31269 272 aa12.48□□□□□ -0.41
SPIDR-212ENST00000519661 PNPLA4P41247 253 aa12.48□□□□□ -0.41
SPIDR-212ENST00000519661 MATR3P43243 847 aaKnown RBP eCLIP12.48□□□□□ -0.412e-6■■■■■ 27.8
SPIDR-212ENST00000519661 ITIH3Q06033 890 aa12.48□□□□□ -0.41
SPIDR-212ENST00000519661 CYP24A1Q07973 514 aa12.48□□□□□ -0.41
SPIDR-212ENST00000519661 PNOCQ13519 176 aa12.48□□□□□ -0.41
SPIDR-212ENST00000519661 FAM171A1Q5VUB5 890 aa12.48□□□□□ -0.41
SPIDR-212ENST00000519661 ANKRD54Q6NXT1 300 aa12.48□□□□□ -0.41
SPIDR-212ENST00000519661 C15orf39Q6ZRI6 1047 aa12.48□□□□□ -0.41
SPIDR-212ENST00000519661 C1orf127Q8N9H9 656 aa12.48□□□□□ -0.41
SPIDR-212ENST00000519661 TRIML1Q8N9V2 468 aa12.48□□□□□ -0.41
SPIDR-212ENST00000519661 SAAL1Q96ER3 474 aa12.48□□□□□ -0.41
SPIDR-212ENST00000519661 CLSTN3Q9BQT9 956 aa12.48□□□□□ -0.41
SPIDR-212ENST00000519661 MKNK1Q9BUB5 465 aa12.48□□□□□ -0.41
SPIDR-212ENST00000519661 PLEKHA4Q9H4M7 779 aa12.48□□□□□ -0.41
SPIDR-212ENST00000519661 VRTNQ9H8Y1 702 aa12.48□□□□□ -0.41
SPIDR-212ENST00000519661 INTS13Q9NVM9 706 aa12.48□□□□□ -0.41
SPIDR-212ENST00000519661 CLDND1Q9NY35 253 aa12.48□□□□□ -0.41
SPIDR-212ENST00000519661 PRKAG3Q9UGI9 489 aa12.48□□□□□ -0.41
SPIDR-212ENST00000519661 VWA8A3KMH1 1905 aa12.48□□□□□ -0.41
SPIDR-212ENST00000519661 ARHGEF37A1IGU5 675 aa12.47□□□□□ -0.41
SPIDR-212ENST00000519661 IKBKBO14920 756 aa12.47□□□□□ -0.41
SPIDR-212ENST00000519661 ABLIM3O94929 683 aa12.47□□□□□ -0.41
SPIDR-212ENST00000519661 FAM163BP0C2L3 166 aa12.47□□□□□ -0.41
SPIDR-212ENST00000519661 KCNA5P22460 613 aa12.47□□□□□ -0.41
SPIDR-212ENST00000519661 AP3M2P53677 418 aa12.47□□□□□ -0.41
SPIDR-212ENST00000519661 TFF2Q03403 129 aa12.47□□□□□ -0.41
SPIDR-212ENST00000519661 MORC3Q14149 939 aa12.47□□□□□ -0.41
SPIDR-212ENST00000519661 ADSSL1Q8N142 457 aa12.47□□□□□ -0.41
SPIDR-212ENST00000519661 APPL2Q8NEU8 664 aa12.47□□□□□ -0.41
SPIDR-212ENST00000519661 TMC2Q8TDI7 906 aa12.47□□□□□ -0.41
SPIDR-212ENST00000519661 PARD3BQ8TEW8 1205 aa12.47□□□□□ -0.41
SPIDR-212ENST00000519661 CACTINQ8WUQ7 758 aaKnown RBP12.47□□□□□ -0.41
SPIDR-212ENST00000519661 AUTS2Q8WXX7 1259 aa12.47□□□□□ -0.41
SPIDR-212ENST00000519661 PDE11AQ9HCR9 933 aa12.47□□□□□ -0.41
SPIDR-212ENST00000519661 LMBRD1Q9NUN5 540 aa12.47□□□□□ -0.41
SPIDR-212ENST00000519661 GDAP2Q9NXN4 497 aa12.47□□□□□ -0.41
SPIDR-212ENST00000519661 DPP3Q9NY33 737 aa12.47□□□□□ -0.41
SPIDR-212ENST00000519661 HSFX1Q9UBD0 423 aa12.47□□□□□ -0.41
SPIDR-212ENST00000519661 SIX4Q9UIU6 781 aa12.47□□□□□ -0.41
SPIDR-212ENST00000519661 CD207Q9UJ71 328 aa12.47□□□□□ -0.41
SPIDR-212ENST00000519661 FBXW11Q9UKB1 542 aa12.47□□□□□ -0.41
SPIDR-212ENST00000519661 FAM50BQ9Y247 325 aa12.47□□□□□ -0.41
SPIDR-212ENST00000519661 PTPRJQ12913 1337 aa12.46□□□□□ -0.41
SPIDR-212ENST00000519661 C19orf67A6NJJ6 358 aa12.46□□□□□ -0.41
SPIDR-212ENST00000519661 PER2O15055 1255 aa12.46□□□□□ -0.41
SPIDR-212ENST00000519661 SPTLC1O15269 473 aa12.46□□□□□ -0.41
SPIDR-212ENST00000519661 MBTPS2O43462 519 aa12.46□□□□□ -0.41
SPIDR-212ENST00000519661 NR3C1P04150 777 aa12.46□□□□□ -0.41
SPIDR-212ENST00000519661 BMP6P22004 513 aa12.46□□□□□ -0.41
SPIDR-212ENST00000519661 TKTP29401 623 aaKnown RBP12.46□□□□□ -0.41
SPIDR-212ENST00000519661 BRCC3P46736 316 aa12.46□□□□□ -0.41
SPIDR-212ENST00000519661 LRRC63Q05C16 580 aa12.46□□□□□ -0.41
SPIDR-212ENST00000519661 PSMD5Q16401 504 aa12.46□□□□□ -0.41
SPIDR-212ENST00000519661 TPRNQ4KMQ1 711 aa12.46□□□□□ -0.41
SPIDR-212ENST00000519661 VARS2Q5ST30 1063 aaKnown RBP12.46□□□□□ -0.41
SPIDR-212ENST00000519661 KIAA1841Q6NSI8 718 aa12.46□□□□□ -0.41
SPIDR-212ENST00000519661 NELFCDQ8IXH7 590 aa12.46□□□□□ -0.41
SPIDR-212ENST00000519661 PPM1EQ8WY54 764 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms