RNA–Protein interactions for RNA: ENST00000519401.5

SPIDR-211, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 2

Gene SPIDR, Length 2,090 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-211ENST00000519401 KBTBD4Q9NVX7 518 aa12.06□□□□□ -0.48
SPIDR-211ENST00000519401 ARMCX3Q9UH62 379 aaPredicted RBP12.06□□□□□ -0.48
SPIDR-211ENST00000519401 PCYOX1Q9UHG3 505 aa12.06□□□□□ -0.48
SPIDR-211ENST00000519401 COQ6Q9Y2Z9 468 aa12.06□□□□□ -0.48
SPIDR-211ENST00000519401 AKAP11Q9UKA4 1901 aa12.05□□□□□ -0.48
SPIDR-211ENST00000519401 FAM47DPA6NHR8 397 aa12.05□□□□□ -0.48
SPIDR-211ENST00000519401 RASA4BC9J798 803 aa12.05□□□□□ -0.48
SPIDR-211ENST00000519401 FAM47E-STBD1D6RA91 191 aa12.05□□□□□ -0.48
SPIDR-211ENST00000519401 HGSO14964 777 aaPredicted RBP12.05□□□□□ -0.48
SPIDR-211ENST00000519401 SPTLC1O15269 473 aa12.05□□□□□ -0.48
SPIDR-211ENST00000519401 RASA4O43374 803 aa12.05□□□□□ -0.48
SPIDR-211ENST00000519401 PEX1O43933 1283 aa12.05□□□□□ -0.48
SPIDR-211ENST00000519401 TLR2O60603 784 aa12.05□□□□□ -0.48
SPIDR-211ENST00000519401 GH1P01241 217 aa12.05□□□□□ -0.48
SPIDR-211ENST00000519401 VCLP18206 1134 aa12.05□□□□□ -0.48
SPIDR-211ENST00000519401 RXRAP19793 462 aa12.05□□□□□ -0.48
SPIDR-211ENST00000519401 CHRNA3P32297 505 aa12.05□□□□□ -0.48
SPIDR-211ENST00000519401 ACTR3P61158 418 aa12.05□□□□□ -0.48
SPIDR-211ENST00000519401 KCNC4Q03721 635 aa12.05□□□□□ -0.48
SPIDR-211ENST00000519401 PTGDRQ13258 359 aa12.05□□□□□ -0.48
SPIDR-211ENST00000519401 SPCS2Q15005 226 aa12.05□□□□□ -0.48
SPIDR-211ENST00000519401 PDK4Q16654 411 aa12.05□□□□□ -0.48
SPIDR-211ENST00000519401 RTN1Q16799 776 aa12.05□□□□□ -0.48
SPIDR-211ENST00000519401 TMEM67Q5HYA8 995 aa12.05□□□□□ -0.48
SPIDR-211ENST00000519401 CENPPQ6IPU0 288 aa12.05□□□□□ -0.48
SPIDR-211ENST00000519401 MARVELD2Q8N4S9 558 aa12.05□□□□□ -0.48
SPIDR-211ENST00000519401 DDHD1Q8NEL9 900 aa12.05□□□□□ -0.48
SPIDR-211ENST00000519401 ZFP28Q8NHY6 868 aa12.05□□□□□ -0.48
SPIDR-211ENST00000519401 ART4Q93070 314 aa12.05□□□□□ -0.48
SPIDR-211ENST00000519401 ZNF594Q96JF6 807 aaPredicted RBP12.05□□□□□ -0.48
SPIDR-211ENST00000519401 NSMCE3Q96MG7 304 aa12.05□□□□□ -0.48
SPIDR-211ENST00000519401 CRAMP1Q96RY5 1269 aa12.05□□□□□ -0.48
SPIDR-211ENST00000519401 RTFDC1Q9BY42 306 aaPredicted RBP12.05□□□□□ -0.48
SPIDR-211ENST00000519401 LRRC27Q9C0I9 530 aa12.05□□□□□ -0.48
SPIDR-211ENST00000519401 A0A087X0T9 212 aa12.04□□□□□ -0.48
SPIDR-211ENST00000519401 HAUS5O94927 633 aa12.04□□□□□ -0.48
SPIDR-211ENST00000519401 FAM228BP0C875 321 aa12.04□□□□□ -0.48
SPIDR-211ENST00000519401 ENDOUP21128 410 aaKnown RBP12.04□□□□□ -0.48
SPIDR-211ENST00000519401 SLC5A2P31639 672 aa12.04□□□□□ -0.48
SPIDR-211ENST00000519401 NUP107P57740 925 aa12.04□□□□□ -0.48
SPIDR-211ENST00000519401 POLR2FP61218 127 aaKnown RBP12.04□□□□□ -0.48
SPIDR-211ENST00000519401 SEPT6Q14141 434 aa12.04□□□□□ -0.48
SPIDR-211ENST00000519401 STYK1Q6J9G0 422 aa12.04□□□□□ -0.48
SPIDR-211ENST00000519401 NIPAL1Q6NVV3 410 aa12.04□□□□□ -0.48
SPIDR-211ENST00000519401 NT5DC3Q86UY8 548 aa12.04□□□□□ -0.48
SPIDR-211ENST00000519401 ANKRD13BQ86YJ7 626 aa12.04□□□□□ -0.48
SPIDR-211ENST00000519401 NEURL2Q9BR09 285 aa12.04□□□□□ -0.48
SPIDR-211ENST00000519401 OSBPL6Q9BZF3 934 aa12.04□□□□□ -0.48
SPIDR-211ENST00000519401 TRIM31Q9BZY9 425 aa12.04□□□□□ -0.48
SPIDR-211ENST00000519401 ZNF696Q9H7X3 374 aa12.04□□□□□ -0.48
SPIDR-211ENST00000519401 TBC1D23Q9NUY8 699 aa12.04□□□□□ -0.48
SPIDR-211ENST00000519401 SELENONQ9NZV5 590 aa12.04□□□□□ -0.48
SPIDR-211ENST00000519401 RIC1Q4ADV7 1423 aa12.04□□□□□ -0.48
SPIDR-211ENST00000519401 PRPF4O43172 522 aaKnown RBP eCLIP12.04□□□□□ -0.48
SPIDR-211ENST00000519401 DENRO43583 198 aaKnown RBP12.04□□□□□ -0.48
SPIDR-211ENST00000519401 CIB2O75838 187 aa12.04□□□□□ -0.48
SPIDR-211ENST00000519401 RARBP10826 455 aa12.04□□□□□ -0.48
SPIDR-211ENST00000519401 TKTP29401 623 aaKnown RBP12.04□□□□□ -0.48
SPIDR-211ENST00000519401 PTGIRP43119 386 aa12.04□□□□□ -0.48
SPIDR-211ENST00000519401 PHKA2P46019 1235 aa12.04□□□□□ -0.48
SPIDR-211ENST00000519401 PDAP1Q13442 181 aaKnown RBP12.04□□□□□ -0.48
SPIDR-211ENST00000519401 RASGRF1Q13972 1273 aa12.04□□□□□ -0.48
SPIDR-211ENST00000519401 SPARCL1Q14515 664 aa12.04□□□□□ -0.48
SPIDR-211ENST00000519401 NADK2Q4G0N4 442 aa12.04□□□□□ -0.48
SPIDR-211ENST00000519401 LRRC6Q86X45 466 aa12.04□□□□□ -0.48
SPIDR-211ENST00000519401 AHI1Q8N157 1196 aa12.04□□□□□ -0.48
SPIDR-211ENST00000519401 DDX51Q8N8A6 666 aaKnown RBP eCLIP12.04□□□□□ -0.48
SPIDR-211ENST00000519401 ZNF280CQ8ND82 737 aa12.04□□□□□ -0.48
SPIDR-211ENST00000519401 PRPF31Q8WWY3 499 aaKnown RBP12.04□□□□□ -0.48
SPIDR-211ENST00000519401 TNFRSF25Q93038 417 aa12.04□□□□□ -0.48
SPIDR-211ENST00000519401 MASTLQ96GX5 879 aa12.04□□□□□ -0.48
SPIDR-211ENST00000519401 TTC25Q96NG3 672 aa12.04□□□□□ -0.48
SPIDR-211ENST00000519401 TRIM55Q9BYV6 548 aa12.04□□□□□ -0.48
SPIDR-211ENST00000519401 TANGO6Q9C0B7 1094 aa12.04□□□□□ -0.48
SPIDR-211ENST00000519401 SENP6Q9GZR1 1112 aaPredicted RBP12.04□□□□□ -0.48
SPIDR-211ENST00000519401 PALMDQ9NP74 551 aa12.04□□□□□ -0.48
SPIDR-211ENST00000519401 ZNF219Q9P2Y4 722 aaPredicted RBP12.04□□□□□ -0.48
SPIDR-211ENST00000519401 STK17AQ9UEE5 414 aa12.04□□□□□ -0.48
SPIDR-211ENST00000519401 TRMT112Q9UI30 125 aaKnown RBP12.04□□□□□ -0.48
SPIDR-211ENST00000519401 PRELID1Q9Y255 219 aa12.04□□□□□ -0.48
SPIDR-211ENST00000519401 SPDYE16A6NNV3 312 aaPredicted RBP12.03□□□□□ -0.48
SPIDR-211ENST00000519401 TNFRSF10AO00220 468 aa12.03□□□□□ -0.48
SPIDR-211ENST00000519401 CNOT3O75175 753 aaKnown RBP12.03□□□□□ -0.48
SPIDR-211ENST00000519401 CDH16O75309 829 aa12.03□□□□□ -0.48
SPIDR-211ENST00000519401 FGGP02679 453 aa12.03□□□□□ -0.48
SPIDR-211ENST00000519401 ALAS1P13196 640 aa12.03□□□□□ -0.48
SPIDR-211ENST00000519401 NPR1P16066 1061 aa12.03□□□□□ -0.48
SPIDR-211ENST00000519401 NR1H2P55055 460 aa12.03□□□□□ -0.48
SPIDR-211ENST00000519401 RPS3AP61247 264 aaKnown RBP12.03□□□□□ -0.48
SPIDR-211ENST00000519401 CRY2Q49AN0 593 aa12.03□□□□□ -0.48
SPIDR-211ENST00000519401 FAM83BQ5T0W9 1011 aa12.03□□□□□ -0.48
SPIDR-211ENST00000519401 ZNF410Q86VK4 478 aa12.03□□□□□ -0.48
SPIDR-211ENST00000519401 BPHLQ86WA6 291 aaPredicted RBP12.03□□□□□ -0.48
SPIDR-211ENST00000519401 SCYL3Q8IZE3 742 aa12.03□□□□□ -0.48
SPIDR-211ENST00000519401 FAM172AQ8WUF8 416 aa12.03□□□□□ -0.48
SPIDR-211ENST00000519401 KLHL4Q9C0H6 718 aa12.03□□□□□ -0.48
SPIDR-211ENST00000519401 GIN1Q9NXP7 522 aa12.03□□□□□ -0.48
SPIDR-211ENST00000519401 SNX24Q9Y343 169 aa12.03□□□□□ -0.48
SPIDR-211ENST00000519401 PCDHA3Q9Y5H8 950 aa12.03□□□□□ -0.48
SPIDR-211ENST00000519401 TIAM2Q8IVF5 1701 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms