RNA–Protein interactions for RNA: ENST00000517667.5

TRAPPC9-203, Transcript of trafficking protein particle complex 9, humanhuman

TSL 3

Gene TRAPPC9, Length 518 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-203ENST00000517667 LOXL4Q96JB6 756 aa12.59□□□□□ -0.39
TRAPPC9-203ENST00000517667 ZSWIM3Q96MP5 696 aa12.59□□□□□ -0.39
TRAPPC9-203ENST00000517667 GOLGA2P5Q9HBQ8 144 aa12.59□□□□□ -0.39
TRAPPC9-203ENST00000517667 SPAG17Q6Q759 2223 aa12.59□□□□□ -0.39
TRAPPC9-203ENST00000517667 ASPMQ8IZT6 3477 aa12.58□□□□□ -0.4
TRAPPC9-203ENST00000517667 SMIM28A0A1B0GU29 152 aa12.58□□□□□ -0.4
TRAPPC9-203ENST00000517667 CITO14578 2027 aa12.58□□□□□ -0.4
TRAPPC9-203ENST00000517667 CHADO15335 359 aa12.58□□□□□ -0.4
TRAPPC9-203ENST00000517667 NEMFO60524 1076 aa12.58□□□□□ -0.4
TRAPPC9-203ENST00000517667 SEC24AO95486 1093 aa12.58□□□□□ -0.4
TRAPPC9-203ENST00000517667 LIG1P18858 919 aa12.58□□□□□ -0.4
TRAPPC9-203ENST00000517667 IGFBP6P24592 240 aaPredicted RBP12.58□□□□□ -0.4
TRAPPC9-203ENST00000517667 KRT2P35908 639 aa12.58□□□□□ -0.4
TRAPPC9-203ENST00000517667 VIPR2P41587 438 aa12.58□□□□□ -0.4
TRAPPC9-203ENST00000517667 TXKP42681 527 aa12.58□□□□□ -0.4
TRAPPC9-203ENST00000517667 KPNA1P52294 538 aaPredicted RBP12.58□□□□□ -0.4
TRAPPC9-203ENST00000517667 ARPP19P56211 112 aa12.58□□□□□ -0.4
TRAPPC9-203ENST00000517667 FCHO2Q0JRZ9 810 aa12.58□□□□□ -0.4
TRAPPC9-203ENST00000517667 SRSF5Q13243 272 aaKnown RBP12.58□□□□□ -0.4
TRAPPC9-203ENST00000517667 EARS2Q5JPH6 523 aaKnown RBP12.58□□□□□ -0.4
TRAPPC9-203ENST00000517667 N4BP2L1Q5TBK1 243 aaPredicted RBP12.58□□□□□ -0.4
TRAPPC9-203ENST00000517667 ATF7IP2Q5U623 682 aa12.58□□□□□ -0.4
TRAPPC9-203ENST00000517667 EEF1DP3Q658K8 133 aa12.58□□□□□ -0.4
TRAPPC9-203ENST00000517667 ZNF280DQ6N043 979 aa12.58□□□□□ -0.4
TRAPPC9-203ENST00000517667 WDR5BQ86VZ2 330 aa12.58□□□□□ -0.4
TRAPPC9-203ENST00000517667 RALGPS2Q86X27 583 aaPredicted RBP12.58□□□□□ -0.4
TRAPPC9-203ENST00000517667 SYNPOQ8N3V7 929 aa12.58□□□□□ -0.4
TRAPPC9-203ENST00000517667 NACC1Q96RE7 527 aa12.58□□□□□ -0.4
TRAPPC9-203ENST00000517667 SLITRK6Q9H5Y7 841 aa12.58□□□□□ -0.4
TRAPPC9-203ENST00000517667 TUFT1Q9NNX1 390 aa12.58□□□□□ -0.4
TRAPPC9-203ENST00000517667 FRYQ5TBA9 3013 aa12.58□□□□□ -0.4
TRAPPC9-203ENST00000517667 SLC38A8A6NNN8 435 aa12.57□□□□□ -0.4
TRAPPC9-203ENST00000517667 HEPACAM2A8MVW5 462 aa12.57□□□□□ -0.4
TRAPPC9-203ENST00000517667 PODXLO00592 558 aa12.57□□□□□ -0.4
TRAPPC9-203ENST00000517667 EPB41L2O43491 1005 aaKnown RBP12.57□□□□□ -0.4
TRAPPC9-203ENST00000517667 ZNF806P0C7X5 589 aa12.57□□□□□ -0.4
TRAPPC9-203ENST00000517667 MYL4P12829 197 aa12.57□□□□□ -0.4
TRAPPC9-203ENST00000517667 RPL9P32969 192 aaKnown RBP12.57□□□□□ -0.4
TRAPPC9-203ENST00000517667 TWF1Q12792 350 aa12.57□□□□□ -0.4
TRAPPC9-203ENST00000517667 PLD1Q13393 1074 aa12.57□□□□□ -0.4
TRAPPC9-203ENST00000517667 MRPL58Q14197 206 aaKnown RBP12.57□□□□□ -0.4
TRAPPC9-203ENST00000517667 CTXN3Q4LDR2 81 aa12.57□□□□□ -0.4
TRAPPC9-203ENST00000517667 HEATR6Q6AI08 1181 aaKnown RBP12.57□□□□□ -0.4
TRAPPC9-203ENST00000517667 BSNDQ8WZ55 320 aa12.57□□□□□ -0.4
TRAPPC9-203ENST00000517667 IFT74Q96LB3 600 aa12.57□□□□□ -0.4
TRAPPC9-203ENST00000517667 CCDC94Q9BW85 323 aaPredicted RBP12.57□□□□□ -0.4
TRAPPC9-203ENST00000517667 AFF4Q9UHB7 1163 aaKnown RBP12.57□□□□□ -0.4
TRAPPC9-203ENST00000517667 FBXL5Q9UKA1 691 aa12.57□□□□□ -0.4
TRAPPC9-203ENST00000517667 NUB1Q9Y5A7 615 aa12.57□□□□□ -0.4
TRAPPC9-203ENST00000517667 MYBPHLA2RUH7 354 aa12.56□□□□□ -0.4
TRAPPC9-203ENST00000517667 ARHGEF35A5YM69 484 aa12.56□□□□□ -0.4
TRAPPC9-203ENST00000517667 FAM205CA6NFA0 338 aa12.56□□□□□ -0.4
TRAPPC9-203ENST00000517667 SPECC1L-ADORA2AF8WAN1 911 aa12.56□□□□□ -0.4
TRAPPC9-203ENST00000517667 NRG2O14511 850 aaPredicted RBP12.56□□□□□ -0.4
TRAPPC9-203ENST00000517667 TM4SF5O14894 197 aa12.56□□□□□ -0.4
TRAPPC9-203ENST00000517667 MOSPD3O75425 235 aa12.56□□□□□ -0.4
TRAPPC9-203ENST00000517667 EPN2O95208 641 aa12.56□□□□□ -0.4
TRAPPC9-203ENST00000517667 EDN1P05305 212 aa12.56□□□□□ -0.4
TRAPPC9-203ENST00000517667 PROS1P07225 676 aa12.56□□□□□ -0.4
TRAPPC9-203ENST00000517667 SPATA31C1P0DKV0 1188 aa12.56□□□□□ -0.4
TRAPPC9-203ENST00000517667 CYP11B2P19099 503 aa12.56□□□□□ -0.4
TRAPPC9-203ENST00000517667 CTHP32929 405 aa12.56□□□□□ -0.4
TRAPPC9-203ENST00000517667 GRM5P41594 1212 aa12.56□□□□□ -0.4
TRAPPC9-203ENST00000517667 SOX4Q06945 474 aaPredicted RBP12.56□□□□□ -0.4
TRAPPC9-203ENST00000517667 SCRN1Q12765 414 aa12.56□□□□□ -0.4
TRAPPC9-203ENST00000517667 NR5A1Q13285 461 aa12.56□□□□□ -0.4
TRAPPC9-203ENST00000517667 TEAD2Q15562 447 aa12.56□□□□□ -0.4
TRAPPC9-203ENST00000517667 XKR4Q5GH76 650 aa12.56□□□□□ -0.4
TRAPPC9-203ENST00000517667 PADI6Q6TGC4 694 aa12.56□□□□□ -0.4
TRAPPC9-203ENST00000517667 Q6ZS52 159 aa12.56□□□□□ -0.4
TRAPPC9-203ENST00000517667 CENPQQ7L2Z9 268 aaPredicted RBP12.56□□□□□ -0.4
TRAPPC9-203ENST00000517667 CACNA2D4Q7Z3S7 1137 aa12.56□□□□□ -0.4
TRAPPC9-203ENST00000517667 HAUS6Q7Z4H7 955 aa12.56□□□□□ -0.4
TRAPPC9-203ENST00000517667 CATSPER3Q86XQ3 398 aa12.56□□□□□ -0.4
TRAPPC9-203ENST00000517667 HS6ST3Q8IZP7 471 aa12.56□□□□□ -0.4
TRAPPC9-203ENST00000517667 APPL2Q8NEU8 664 aa12.56□□□□□ -0.4
TRAPPC9-203ENST00000517667 ERMNQ8TAM6 284 aa12.56□□□□□ -0.4
TRAPPC9-203ENST00000517667 TNFRSF25Q93038 417 aa12.56□□□□□ -0.4
TRAPPC9-203ENST00000517667 MTMR9Q96QG7 549 aa12.56□□□□□ -0.4
TRAPPC9-203ENST00000517667 TM6SF1Q9BZW5 370 aa12.56□□□□□ -0.4
TRAPPC9-203ENST00000517667 ARRDC1-AS1Q9H2J1 176 aa12.56□□□□□ -0.4
TRAPPC9-203ENST00000517667 GJB4Q9NTQ9 266 aa12.56□□□□□ -0.4
TRAPPC9-203ENST00000517667 RBM12Q9NTZ6 932 aaKnown RBP12.56□□□□□ -0.4
TRAPPC9-203ENST00000517667 CEP72Q9P209 647 aa12.56□□□□□ -0.4
TRAPPC9-203ENST00000517667 TNFSF13BQ9Y275 285 aa12.56□□□□□ -0.4
TRAPPC9-203ENST00000517667 USP20Q9Y2K6 914 aa12.56□□□□□ -0.4
TRAPPC9-203ENST00000517667 GTF3C3Q9Y5Q9 886 aa12.56□□□□□ -0.4
TRAPPC9-203ENST00000517667 A0A087WWV3 80 aa12.55□□□□□ -0.4
TRAPPC9-203ENST00000517667 CCDC163A0A0D9SF12 145 aa12.55□□□□□ -0.4
TRAPPC9-203ENST00000517667 RPP40O75818 363 aaKnown RBP12.55□□□□□ -0.4
TRAPPC9-203ENST00000517667 CPB1P15086 417 aa12.55□□□□□ -0.4
TRAPPC9-203ENST00000517667 CCINQ13939 588 aa12.55□□□□□ -0.4
TRAPPC9-203ENST00000517667 SF3A2Q15428 464 aaKnown RBP12.55□□□□□ -0.4
TRAPPC9-203ENST00000517667 ARHGAP29Q52LW3 1261 aa12.55□□□□□ -0.4
TRAPPC9-203ENST00000517667 STPG1Q5TH74 334 aa12.55□□□□□ -0.4
TRAPPC9-203ENST00000517667 ALKAL1Q6UXT8 129 aa12.55□□□□□ -0.4
TRAPPC9-203ENST00000517667 SHKBP1Q8TBC3 707 aa12.55□□□□□ -0.4
TRAPPC9-203ENST00000517667 GAB3Q8WWW8 586 aa12.55□□□□□ -0.4
TRAPPC9-203ENST00000517667 KIFAP3Q92845 792 aa12.55□□□□□ -0.4
TRAPPC9-203ENST00000517667 SUSD3Q96L08 255 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms