RNA–Protein interactions for RNA: ENST00000515420.1

CLCN3-210, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 3

Gene CLCN3, Length 735 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-210ENST00000515420 ZNF507Q8TCN5 953 aa13.87□□□□□ -0.19
CLCN3-210ENST00000515420 CGNQ9P2M7 1197 aaKnown RBP13.87□□□□□ -0.19
CLCN3-210ENST00000515420 SERTAD1Q9UHV2 236 aa13.87□□□□□ -0.19
CLCN3-210ENST00000515420 FBXW11Q9UKB1 542 aa13.87□□□□□ -0.19
CLCN3-210ENST00000515420 NR2E1Q9Y466 385 aa13.87□□□□□ -0.19
CLCN3-210ENST00000515420 H7C4K7 107 aa13.86□□□□□ -0.19
CLCN3-210ENST00000515420 EXTL3O43909 919 aa13.86□□□□□ -0.19
CLCN3-210ENST00000515420 IGFBP6P24592 240 aaPredicted RBP13.86□□□□□ -0.19
CLCN3-210ENST00000515420 HOXA9P31269 272 aa13.86□□□□□ -0.19
CLCN3-210ENST00000515420 MCM4P33991 863 aa13.86□□□□□ -0.19
CLCN3-210ENST00000515420 PSMD2Q13200 908 aa13.86□□□□□ -0.19
CLCN3-210ENST00000515420 CUL4BQ13620 913 aa13.86□□□□□ -0.19
CLCN3-210ENST00000515420 RAB33AQ14088 237 aa13.86□□□□□ -0.19
CLCN3-210ENST00000515420 MRPL58Q14197 206 aaKnown RBP13.86□□□□□ -0.19
CLCN3-210ENST00000515420 BMT2Q1RMZ1 405 aa13.86□□□□□ -0.19
CLCN3-210ENST00000515420 SLC8B1Q6J4K2 584 aa13.86□□□□□ -0.19
CLCN3-210ENST00000515420 ARMCX5Q6P1M9 558 aa13.86□□□□□ -0.19
CLCN3-210ENST00000515420 KREMEN2Q8NCW0 462 aa13.86□□□□□ -0.19
CLCN3-210ENST00000515420 FAM212AQ96EL1 285 aa13.86□□□□□ -0.19
CLCN3-210ENST00000515420 PAGE5Q96GU1 130 aa13.86□□□□□ -0.19
CLCN3-210ENST00000515420 CHAMP1Q96JM3 812 aa13.86□□□□□ -0.19
CLCN3-210ENST00000515420 APOL5Q9BWW9 433 aa13.86□□□□□ -0.19
CLCN3-210ENST00000515420 OXCT2Q9BYC2 517 aaPredicted RBP13.86□□□□□ -0.19
CLCN3-210ENST00000515420 BLZF1Q9H2G9 400 aa13.86□□□□□ -0.19
CLCN3-210ENST00000515420 IKZF4Q9H2S9 585 aa13.86□□□□□ -0.19
CLCN3-210ENST00000515420 CIZ1Q9ULV3 898 aaPredicted RBP13.86□□□□□ -0.19
CLCN3-210ENST00000515420 PCDHB8Q9UN66 801 aa13.86□□□□□ -0.19
CLCN3-210ENST00000515420 USTQ9Y2C2 406 aa13.86□□□□□ -0.19
CLCN3-210ENST00000515420 ANO9A1A5B4 782 aa13.85□□□□□ -0.19
CLCN3-210ENST00000515420 ARHGEF37A1IGU5 675 aa13.85□□□□□ -0.19
CLCN3-210ENST00000515420 PI4K2BG5E9Z4 385 aa13.85□□□□□ -0.19
CLCN3-210ENST00000515420 KLRC4O43908 158 aa13.85□□□□□ -0.19
CLCN3-210ENST00000515420 TBC1D4O60343 1298 aa13.85□□□□□ -0.19
CLCN3-210ENST00000515420 NFICP08651 508 aa13.85□□□□□ -0.19
CLCN3-210ENST00000515420 POU2F2P09086 479 aa13.85□□□□□ -0.19
CLCN3-210ENST00000515420 HNRNPA1P09651 372 aaKnown RBP eCLIP13.85□□□□□ -0.19
CLCN3-210ENST00000515420 ALADP13716 330 aa13.85□□□□□ -0.19
CLCN3-210ENST00000515420 RPL17P18621 184 aaKnown RBP13.85□□□□□ -0.19
CLCN3-210ENST00000515420 NDUFA8P51970 172 aa13.85□□□□□ -0.19
CLCN3-210ENST00000515420 SPAG1Q07617 926 aa13.85□□□□□ -0.19
CLCN3-210ENST00000515420 UVSSAQ2YD98 709 aa13.85□□□□□ -0.19
CLCN3-210ENST00000515420 VARS2Q5ST30 1063 aaKnown RBP13.85□□□□□ -0.19
CLCN3-210ENST00000515420 TMC5Q6UXY8 1006 aa13.85□□□□□ -0.19
CLCN3-210ENST00000515420 PALB2Q86YC2 1186 aa13.85□□□□□ -0.19
CLCN3-210ENST00000515420 GPD1LQ8N335 351 aa13.85□□□□□ -0.19
CLCN3-210ENST00000515420 C12orf76Q8N812 135 aaPredicted RBP13.85□□□□□ -0.19
CLCN3-210ENST00000515420 FSIP1Q8NA03 581 aa13.85□□□□□ -0.19
CLCN3-210ENST00000515420 GLIS3Q8NEA6 775 aa13.85□□□□□ -0.19
CLCN3-210ENST00000515420 CCDC34Q96HJ3 373 aa13.85□□□□□ -0.19
CLCN3-210ENST00000515420 CBWD1Q9BRT8 395 aa13.85□□□□□ -0.19
CLCN3-210ENST00000515420 FAM213AQ9BRX8 229 aa13.85□□□□□ -0.19
CLCN3-210ENST00000515420 C1QTNF1Q9BXJ1 281 aa13.85□□□□□ -0.19
CLCN3-210ENST00000515420 POMKQ9H5K3 350 aa13.85□□□□□ -0.19
CLCN3-210ENST00000515420 KIAA1586Q9HCI6 787 aa13.85□□□□□ -0.19
CLCN3-210ENST00000515420 EXOC1Q9NV70 894 aa13.85□□□□□ -0.19
CLCN3-210ENST00000515420 SCN1AP35498 2009 aa13.85□□□□□ -0.19
CLCN3-210ENST00000515420 I3L4J1 428 aa13.84□□□□□ -0.19
CLCN3-210ENST00000515420 PIRO00625 290 aa13.84□□□□□ -0.19
CLCN3-210ENST00000515420 ZMYND10O75800 440 aa13.84□□□□□ -0.19
CLCN3-210ENST00000515420 TYMPP19971 482 aa13.84□□□□□ -0.19
CLCN3-210ENST00000515420 CASP1P29466 404 aa13.84□□□□□ -0.19
CLCN3-210ENST00000515420 OR1D2P34982 312 aa13.84□□□□□ -0.19
CLCN3-210ENST00000515420 HOXD13P35453 343 aa13.84□□□□□ -0.19
CLCN3-210ENST00000515420 SURF1Q15526 300 aa13.84□□□□□ -0.19
CLCN3-210ENST00000515420 LIN9Q5TKA1 542 aa13.84□□□□□ -0.19
CLCN3-210ENST00000515420 C9orf57Q5W0N0 161 aa13.84□□□□□ -0.19
CLCN3-210ENST00000515420 ZNF280DQ6N043 979 aa13.84□□□□□ -0.19
CLCN3-210ENST00000515420 KANK3Q6NY19 840 aa13.84□□□□□ -0.19
CLCN3-210ENST00000515420 KRBA2Q6ZNG9 492 aa13.84□□□□□ -0.19
CLCN3-210ENST00000515420 HS2ST1Q7LGA3 356 aa13.84□□□□□ -0.19
CLCN3-210ENST00000515420 GLYCTKQ8IVS8 523 aa13.84□□□□□ -0.19
CLCN3-210ENST00000515420 C12orf56Q8IXR9 622 aa13.84□□□□□ -0.19
CLCN3-210ENST00000515420 GRAMD1CQ8IYS0 662 aa13.84□□□□□ -0.19
CLCN3-210ENST00000515420 CACTINQ8WUQ7 758 aaKnown RBP13.84□□□□□ -0.19
CLCN3-210ENST00000515420 SCFD1Q8WVM8 642 aa13.84□□□□□ -0.19
CLCN3-210ENST00000515420 HPS3Q969F9 1004 aa13.84□□□□□ -0.19
CLCN3-210ENST00000515420 SAAL1Q96ER3 474 aa13.84□□□□□ -0.19
CLCN3-210ENST00000515420 RBAKQ9NYW8 714 aaPredicted RBP13.84□□□□□ -0.19
CLCN3-210ENST00000515420 MAFFQ9ULX9 164 aa13.84□□□□□ -0.19
CLCN3-210ENST00000515420 CDY1Q9Y6F8 540 aa13.84□□□□□ -0.19
CLCN3-210ENST00000515420 TSC2P49815 1807 aa13.84□□□□□ -0.19
CLCN3-210ENST00000515420 CCDC195A0A1B0GUA6 201 aa13.83□□□□□ -0.2
CLCN3-210ENST00000515420 TGFB1I1O43294 461 aa13.83□□□□□ -0.2
CLCN3-210ENST00000515420 DCXO43602 365 aa13.83□□□□□ -0.2
CLCN3-210ENST00000515420 ZNF202O95125 648 aa13.83□□□□□ -0.2
CLCN3-210ENST00000515420 OAZ2O95190 189 aa13.83□□□□□ -0.2
CLCN3-210ENST00000515420 PNPLA4P41247 253 aa13.83□□□□□ -0.2
CLCN3-210ENST00000515420 LILRA4P59901 499 aa13.83□□□□□ -0.2
CLCN3-210ENST00000515420 KNOP1Q1ED39 458 aaKnown RBP13.83□□□□□ -0.2
CLCN3-210ENST00000515420 TPGS2Q68CL5 300 aa13.83□□□□□ -0.2
CLCN3-210ENST00000515420 CCDC149Q6ZUS6 474 aa13.83□□□□□ -0.2
CLCN3-210ENST00000515420 RNF135Q8IUD6 432 aa13.83□□□□□ -0.2
CLCN3-210ENST00000515420 EFCAB13Q8IY85 973 aa13.83□□□□□ -0.2
CLCN3-210ENST00000515420 PLCD3Q8N3E9 789 aa13.83□□□□□ -0.2
CLCN3-210ENST00000515420 ZNF461Q8TAF7 563 aa13.83□□□□□ -0.2
CLCN3-210ENST00000515420 GOLGA5Q8TBA6 731 aa13.83□□□□□ -0.2
CLCN3-210ENST00000515420 TMEM174Q8WUU8 243 aa13.83□□□□□ -0.2
CLCN3-210ENST00000515420 CCDC47Q96A33 483 aaKnown RBP13.83□□□□□ -0.2
CLCN3-210ENST00000515420 ZNF707Q96C28 371 aaPredicted RBP13.83□□□□□ -0.2
CLCN3-210ENST00000515420 RPGRIP1Q96KN7 1286 aa13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms