RNA–Protein interactions for RNA: ENST00000513725.1

SFXN1-210, Transcript of sideroflexin 1, humanhuman

TSL 2

Gene SFXN1, Length 597 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-210ENST00000513725 UBR5O95071 2799 aaPredicted RBP13.17□□□□□ -0.3
SFXN1-210ENST00000513725 MGAQ8IWI9 3026 aa13.17□□□□□ -0.3
SFXN1-210ENST00000513725 MUC22E2RYF6 1773 aaPredicted RBP13.17□□□□□ -0.3
SFXN1-210ENST00000513725 KIF26AQ9ULI4 1882 aaPredicted RBP13.16□□□□□ -0.3
SFXN1-210ENST00000513725 TNRC6BQ9UPQ9 1833 aaKnown RBP13.16□□□□□ -0.3
SFXN1-210ENST00000513725 NOTCH2Q04721 2471 aa13.16□□□□□ -0.3
SFXN1-210ENST00000513725 IFIT3O14879 490 aaKnown RBP13.16□□□□□ -0.3
SFXN1-210ENST00000513725 ERLIN2O94905 339 aa13.16□□□□□ -0.3
SFXN1-210ENST00000513725 GP1BBP13224 206 aa13.16□□□□□ -0.3
SFXN1-210ENST00000513725 ATF2P15336 505 aa13.16□□□□□ -0.3
SFXN1-210ENST00000513725 MX1P20591 662 aa13.16□□□□□ -0.3
SFXN1-210ENST00000513725 FGFR3P22607 806 aa13.16□□□□□ -0.3
SFXN1-210ENST00000513725 AXLP30530 894 aa13.16□□□□□ -0.3
SFXN1-210ENST00000513725 EPHA5P54756 1037 aa13.16□□□□□ -0.3
SFXN1-210ENST00000513725 ANO7Q6IWH7 933 aa13.16□□□□□ -0.3
SFXN1-210ENST00000513725 ANKS3Q6ZW76 656 aa13.16□□□□□ -0.3
SFXN1-210ENST00000513725 CYB5R4Q7L1T6 521 aa13.16□□□□□ -0.3
SFXN1-210ENST00000513725 RASSF3Q86WH2 238 aa13.16□□□□□ -0.3
SFXN1-210ENST00000513725 TCEAL8Q8IYN2 117 aa13.16□□□□□ -0.3
SFXN1-210ENST00000513725 DAGLBQ8NCG7 672 aa13.16□□□□□ -0.3
SFXN1-210ENST00000513725 OR2I1PQ8NGU4 316 aa13.16□□□□□ -0.3
SFXN1-210ENST00000513725 CTCFLQ8NI51 663 aaPredicted RBP13.16□□□□□ -0.3
SFXN1-210ENST00000513725 BAP1Q92560 729 aa13.16□□□□□ -0.3
SFXN1-210ENST00000513725 CNOT6LQ96LI5 555 aaKnown RBP13.16□□□□□ -0.3
SFXN1-210ENST00000513725 JPH2Q9BR39 696 aaPredicted RBP13.16□□□□□ -0.3
SFXN1-210ENST00000513725 NIFKQ9BYG3 293 aaKnown RBP13.16□□□□□ -0.3
SFXN1-210ENST00000513725 ANO3Q9BYT9 981 aa13.16□□□□□ -0.3
SFXN1-210ENST00000513725 DCTPP1Q9H773 170 aa13.16□□□□□ -0.3
SFXN1-210ENST00000513725 CAPN10Q9HC96 672 aa13.16□□□□□ -0.3
SFXN1-210ENST00000513725 THG1LQ9NWX6 298 aaKnown RBP13.16□□□□□ -0.3
SFXN1-210ENST00000513725 OBP2AQ9NY56 170 aa13.16□□□□□ -0.3
SFXN1-210ENST00000513725 SRPK3Q9UPE1 567 aa13.16□□□□□ -0.3
SFXN1-210ENST00000513725 COL4A3BPQ9Y5P4 624 aa13.16□□□□□ -0.3
SFXN1-210ENST00000513725 DOPEY2Q9Y3R5 2298 aa13.16□□□□□ -0.3
SFXN1-210ENST00000513725 GOLGA4Q13439 2230 aaKnown RBP13.16□□□□□ -0.3
SFXN1-210ENST00000513725 FAM86B1E9PN63 330 aa13.15□□□□□ -0.3
SFXN1-210ENST00000513725 MAFO75444 373 aaPredicted RBP13.15□□□□□ -0.3
SFXN1-210ENST00000513725 ABLIM3O94929 683 aa13.15□□□□□ -0.3
SFXN1-210ENST00000513725 FAM86B2P0C5J1 330 aa13.15□□□□□ -0.3
SFXN1-210ENST00000513725 HLA-EP13747 358 aa13.15□□□□□ -0.3
SFXN1-210ENST00000513725 AKAP5P24588 427 aa13.15□□□□□ -0.3
SFXN1-210ENST00000513725 SREBF1P36956 1147 aa13.15□□□□□ -0.3
SFXN1-210ENST00000513725 CCR10P46092 362 aa13.15□□□□□ -0.3
SFXN1-210ENST00000513725 ROR1Q01973 937 aa13.15□□□□□ -0.3
SFXN1-210ENST00000513725 CACNB1Q02641 598 aaPredicted RBP13.15□□□□□ -0.3
SFXN1-210ENST00000513725 MARCH9Q86YJ5 346 aa13.15□□□□□ -0.3
SFXN1-210ENST00000513725 GPIHBP1Q8IV16 184 aa13.15□□□□□ -0.3
SFXN1-210ENST00000513725 FMNL3Q8IVF7 1028 aa13.15□□□□□ -0.3
SFXN1-210ENST00000513725 TEX2Q8IWB9 1127 aa13.15□□□□□ -0.3
SFXN1-210ENST00000513725 SHKBP1Q8TBC3 707 aa13.15□□□□□ -0.3
SFXN1-210ENST00000513725 OTUD7AQ8TE49 926 aaPredicted RBP13.15□□□□□ -0.3
SFXN1-210ENST00000513725 LRRC3BQ96PB8 259 aa13.15□□□□□ -0.3
SFXN1-210ENST00000513725 CSRNP2Q9H175 543 aa13.15□□□□□ -0.3
SFXN1-210ENST00000513725 MINDY3Q9H8M7 445 aa13.15□□□□□ -0.3
SFXN1-210ENST00000513725 DISC1Q9NRI5 854 aa13.15□□□□□ -0.3
SFXN1-210ENST00000513725 KLK14Q9P0G3 267 aa13.15□□□□□ -0.3
SFXN1-210ENST00000513725 CIZ1Q9ULV3 898 aaPredicted RBP13.15□□□□□ -0.3
SFXN1-210ENST00000513725 COL5A1P20908 1838 aaPredicted RBP13.15□□□□□ -0.3
SFXN1-210ENST00000513725 GON4LQ3T8J9 2241 aa13.15□□□□□ -0.31
SFXN1-210ENST00000513725 SRGAP2CP0DJJ0 459 aa13.14□□□□□ -0.31
SFXN1-210ENST00000513725 ITPKAP23677 461 aa13.14□□□□□ -0.31
SFXN1-210ENST00000513725 GNAQP50148 359 aa13.14□□□□□ -0.31
SFXN1-210ENST00000513725 CXADRP78310 365 aa13.14□□□□□ -0.31
SFXN1-210ENST00000513725 SETQ01105 290 aaPredicted RBP13.14□□□□□ -0.31
SFXN1-210ENST00000513725 RHDQ02161 417 aa13.14□□□□□ -0.31
SFXN1-210ENST00000513725 PCBP1Q15365 356 aaKnown RBP eCLIP13.14□□□□□ -0.31
SFXN1-210ENST00000513725 SPRYD3Q8NCJ5 442 aa13.14□□□□□ -0.31
SFXN1-210ENST00000513725 BPIFB1Q8TDL5 484 aa13.14□□□□□ -0.31
SFXN1-210ENST00000513725 MAP3K14Q99558 947 aa13.14□□□□□ -0.31
SFXN1-210ENST00000513725 NXF3Q9H4D5 531 aaKnown RBP13.14□□□□□ -0.31
SFXN1-210ENST00000513725 ANKMY1Q9P2S6 941 aa13.14□□□□□ -0.31
SFXN1-210ENST00000513725 PARP2Q9UGN5 583 aa13.14□□□□□ -0.31
SFXN1-210ENST00000513725 CREBBPQ92793 2442 aa13.13□□□□□ -0.31
SFXN1-210ENST00000513725 IGLV3-22A0A075B6J6 115 aa13.13□□□□□ -0.31
SFXN1-210ENST00000513725 A0A1W2PRU2 124 aa13.13□□□□□ -0.31
SFXN1-210ENST00000513725 GALK1P51570 392 aa13.13□□□□□ -0.31
SFXN1-210ENST00000513725 TWF1Q12792 350 aa13.13□□□□□ -0.31
SFXN1-210ENST00000513725 TRDNQ13061 729 aa13.13□□□□□ -0.31
SFXN1-210ENST00000513725 PSMD2Q13200 908 aa13.13□□□□□ -0.31
SFXN1-210ENST00000513725 RUNX3Q13761 415 aa13.13□□□□□ -0.31
SFXN1-210ENST00000513725 NBR1Q14596 966 aa13.13□□□□□ -0.31
SFXN1-210ENST00000513725 SART3Q15020 963 aaKnown RBP13.13□□□□□ -0.31
SFXN1-210ENST00000513725 UGCGQ16739 394 aa13.13□□□□□ -0.31
SFXN1-210ENST00000513725 XKR3Q5GH77 459 aa13.13□□□□□ -0.31
SFXN1-210ENST00000513725 SLC8B1Q6J4K2 584 aa13.13□□□□□ -0.31
SFXN1-210ENST00000513725 PRICKLE2Q7Z3G6 844 aa13.13□□□□□ -0.31
SFXN1-210ENST00000513725 HEATR3Q7Z4Q2 680 aa13.13□□□□□ -0.31
SFXN1-210ENST00000513725 CCDC26Q8TAB7 109 aa13.13□□□□□ -0.31
SFXN1-210ENST00000513725 OLIG1Q8TAK6 271 aa13.13□□□□□ -0.31
SFXN1-210ENST00000513725 NXPE2Q96DL1 559 aa13.13□□□□□ -0.31
SFXN1-210ENST00000513725 FNBP1Q96RU3 617 aa13.13□□□□□ -0.31
SFXN1-210ENST00000513725 CEP89Q96ST8 783 aa13.13□□□□□ -0.31
SFXN1-210ENST00000513725 SEMA4CQ9C0C4 833 aa13.13□□□□□ -0.31
SFXN1-210ENST00000513725 SENP2Q9HC62 589 aa13.13□□□□□ -0.31
SFXN1-210ENST00000513725 CEP72Q9P209 647 aa13.13□□□□□ -0.31
SFXN1-210ENST00000513725 PCOLCE2Q9UKZ9 415 aa13.13□□□□□ -0.31
SFXN1-210ENST00000513725 PCDH15Q96QU1 1955 aa13.12□□□□□ -0.31
SFXN1-210ENST00000513725 FAM149AA5PLN7 773 aa13.12□□□□□ -0.31
SFXN1-210ENST00000513725 CBFA2T3O75081 653 aa13.12□□□□□ -0.31
SFXN1-210ENST00000513725 GJB3O75712 270 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms