RNA–Protein interactions for RNA: ENST00000512756.5

COL11A1-210, Transcript of collagen type XI alpha 1 chain, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene COL11A1, Length 5,442 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-210ENST00000512756 JMJD4Q9H9V9 463 aa13.1□□□□□ -0.31
COL11A1-210ENST00000512756 ENO1P06733 434 aaKnown RBP13.1□□□□□ -0.31
COL11A1-210ENST00000512756 NR3C2P08235 984 aa13.1□□□□□ -0.31
COL11A1-210ENST00000512756 KCNA2P16389 499 aa13.1□□□□□ -0.31
COL11A1-210ENST00000512756 SULT1E1P49888 294 aa13.1□□□□□ -0.31
COL11A1-210ENST00000512756 BAATQ14032 418 aaPredicted RBP13.1□□□□□ -0.31
COL11A1-210ENST00000512756 PRUNE1Q86TP1 453 aa13.1□□□□□ -0.31
COL11A1-210ENST00000512756 ARMC2Q8NEN0 867 aa13.1□□□□□ -0.31
COL11A1-210ENST00000512756 NAF1Q96HR8 494 aaKnown RBP13.1□□□□□ -0.31
COL11A1-210ENST00000512756 ZNF668Q96K58 619 aaPredicted RBP13.1□□□□□ -0.31
COL11A1-210ENST00000512756 CCDC90BQ9GZT6 254 aa13.1□□□□□ -0.31
COL11A1-210ENST00000512756 ANKEF1Q9NU02 776 aa13.1□□□□□ -0.31
COL11A1-210ENST00000512756 KLHL11Q9NVR0 708 aa13.1□□□□□ -0.31
COL11A1-210ENST00000512756 KIF17Q9P2E2 1029 aa13.1□□□□□ -0.31
COL11A1-210ENST00000512756 ZNF197O14709 1029 aa13.1□□□□□ -0.31
COL11A1-210ENST00000512756 MAGEB2O15479 319 aa13.1□□□□□ -0.31
COL11A1-210ENST00000512756 SNRPAP09012 282 aaKnown RBP13.1□□□□□ -0.31
COL11A1-210ENST00000512756 PRLRP16471 622 aa13.1□□□□□ -0.31
COL11A1-210ENST00000512756 FNTAP49354 379 aa13.1□□□□□ -0.31
COL11A1-210ENST00000512756 POTEAQ6S8J7 498 aa13.1□□□□□ -0.31
COL11A1-210ENST00000512756 C3orf20Q8ND61 904 aa13.1□□□□□ -0.31
COL11A1-210ENST00000512756 CYFIP2Q96F07 1278 aa13.1□□□□□ -0.31
COL11A1-210ENST00000512756 MXRA8Q9BRK3 442 aa13.1□□□□□ -0.31
COL11A1-210ENST00000512756 NPHS2Q9NP85 383 aa13.1□□□□□ -0.31
COL11A1-210ENST00000512756 TMEM120BA0PK00 339 aa13.1□□□□□ -0.31
COL11A1-210ENST00000512756 ANGPT2O15123 496 aa13.1□□□□□ -0.31
COL11A1-210ENST00000512756 KIF1CO43896 1103 aaKnown RBP13.1□□□□□ -0.31
COL11A1-210ENST00000512756 HMGCS2P54868 508 aa13.1□□□□□ -0.31
COL11A1-210ENST00000512756 TMEM132DQ14C87 1099 aa13.1□□□□□ -0.31
COL11A1-210ENST00000512756 LONP2Q86WA8 852 aa13.1□□□□□ -0.31
COL11A1-210ENST00000512756 RIN2Q8WYP3 895 aaPredicted RBP13.1□□□□□ -0.31
COL11A1-210ENST00000512756 CMTM5Q96DZ9 223 aa13.1□□□□□ -0.31
COL11A1-210ENST00000512756 DNAJC7Q99615 494 aa13.1□□□□□ -0.31
COL11A1-210ENST00000512756 DFFAO00273 331 aa13.1□□□□□ -0.31
COL11A1-210ENST00000512756 HLA-DRAP01903 254 aa13.1□□□□□ -0.31
COL11A1-210ENST00000512756 DDX5P17844 614 aaKnown RBP13.1□□□□□ -0.31
COL11A1-210ENST00000512756 SSTR3P32745 418 aaPredicted RBP13.1□□□□□ -0.31
COL11A1-210ENST00000512756 MED21Q13503 144 aa13.1□□□□□ -0.31
COL11A1-210ENST00000512756 EMC2Q15006 297 aa13.1□□□□□ -0.31
COL11A1-210ENST00000512756 PTPAQ15257 358 aa13.1□□□□□ -0.31
COL11A1-210ENST00000512756 FIGNQ5HY92 759 aa13.1□□□□□ -0.31
COL11A1-210ENST00000512756 WDR93Q6P2C0 686 aa13.1□□□□□ -0.31
COL11A1-210ENST00000512756 APPL2Q8NEU8 664 aa13.1□□□□□ -0.31
COL11A1-210ENST00000512756 RDM1Q8NG50 284 aa13.1□□□□□ -0.31
COL11A1-210ENST00000512756 SENP2Q9HC62 589 aa13.1□□□□□ -0.31
COL11A1-210ENST00000512756 GTF3C4Q9UKN8 822 aa13.1□□□□□ -0.31
COL11A1-210ENST00000512756 IGSF9BQ9UPX0 1349 aa13.09□□□□□ -0.31
COL11A1-210ENST00000512756 CCT8L1PA6NM43 557 aa13.09□□□□□ -0.31
COL11A1-210ENST00000512756 HNRNPCL2B2RXH8 293 aa13.09□□□□□ -0.31
COL11A1-210ENST00000512756 SPRP35270 261 aaPredicted RBP13.09□□□□□ -0.31
COL11A1-210ENST00000512756 KCNA1Q09470 495 aa13.09□□□□□ -0.31
COL11A1-210ENST00000512756 PTK7Q13308 1070 aa13.09□□□□□ -0.31
COL11A1-210ENST00000512756 ANO4Q32M45 955 aa13.09□□□□□ -0.31
COL11A1-210ENST00000512756 CDC42EP5Q6NZY7 148 aa13.09□□□□□ -0.31
COL11A1-210ENST00000512756 C4orf33Q8N1A6 199 aa13.09□□□□□ -0.31
COL11A1-210ENST00000512756 TMEM143Q96AN5 459 aa13.09□□□□□ -0.31
COL11A1-210ENST00000512756 EHD2Q9NZN4 543 aa13.09□□□□□ -0.31
COL11A1-210ENST00000512756 SLC4A7Q9Y6M7 1214 aa13.09□□□□□ -0.31
COL11A1-210ENST00000512756 POLR1AO95602 1720 aaPredicted RBP13.09□□□□□ -0.31
COL11A1-210ENST00000512756 TROAPQ12815 778 aa13.09□□□□□ -0.31
COL11A1-210ENST00000512756 KYNUQ16719 465 aa13.09□□□□□ -0.31
COL11A1-210ENST00000512756 TAS2R42Q7RTR8 314 aa13.09□□□□□ -0.31
COL11A1-210ENST00000512756 OR2W6PQ8NHA6 318 aa13.09□□□□□ -0.31
COL11A1-210ENST00000512756 IL17RAQ96F46 866 aa13.09□□□□□ -0.31
COL11A1-210ENST00000512756 DDX50Q9BQ39 737 aaKnown RBP13.09□□□□□ -0.31
COL11A1-210ENST00000512756 C17orf75Q9HAS0 396 aa13.09□□□□□ -0.31
COL11A1-210ENST00000512756 GPBP1L1Q9HC44 474 aaPredicted RBP13.09□□□□□ -0.31
COL11A1-210ENST00000512756 AIPL1Q9NZN9 384 aa13.09□□□□□ -0.31
COL11A1-210ENST00000512756 SNX9Q9Y5X1 595 aa13.09□□□□□ -0.31
COL11A1-210ENST00000512756 SETD1BQ9UPS6 1966 aaKnown RBP13.09□□□□□ -0.31
COL11A1-210ENST00000512756 EXTL3O43909 919 aa13.09□□□□□ -0.31
COL11A1-210ENST00000512756 GFAPP14136 432 aa13.09□□□□□ -0.31
COL11A1-210ENST00000512756 COILP38432 576 aaPredicted RBP13.09□□□□□ -0.31
COL11A1-210ENST00000512756 ACADSBP45954 432 aa13.09□□□□□ -0.31
COL11A1-210ENST00000512756 MTMR2Q13614 643 aa13.09□□□□□ -0.31
COL11A1-210ENST00000512756 CNGA3Q16281 694 aa13.09□□□□□ -0.31
COL11A1-210ENST00000512756 ZC2HC1CQ53FD0 456 aaPredicted RBP13.09□□□□□ -0.31
COL11A1-210ENST00000512756 RMDN1Q96DB5 314 aa13.09□□□□□ -0.31
COL11A1-210ENST00000512756 ERP27Q96DN0 273 aa13.09□□□□□ -0.31
COL11A1-210ENST00000512756 OTUD5Q96G74 571 aa13.09□□□□□ -0.31
COL11A1-210ENST00000512756 SERPINB12Q96P63 405 aa13.09□□□□□ -0.31
COL11A1-210ENST00000512756 MOV10L1Q9BXT6 1211 aaKnown RBP13.09□□□□□ -0.31
COL11A1-210ENST00000512756 PCDHGB4Q9UN71 923 aa13.09□□□□□ -0.31
COL11A1-210ENST00000512756 FARP1Q9Y4F1 1045 aaPredicted RBP13.09□□□□□ -0.31
COL11A1-210ENST00000512756 KRT16P08779 473 aa13.09□□□□□ -0.31
COL11A1-210ENST00000512756 ITGA8P53708 1063 aa13.09□□□□□ -0.31
COL11A1-210ENST00000512756 PTGISQ16647 500 aa13.09□□□□□ -0.31
COL11A1-210ENST00000512756 C16orf89Q6UX73 402 aa13.09□□□□□ -0.31
COL11A1-210ENST00000512756 RBM43Q6ZSC3 357 aaKnown RBP13.09□□□□□ -0.31
COL11A1-210ENST00000512756 COL23A1Q86Y22 540 aaPredicted RBP13.09□□□□□ -0.31
COL11A1-210ENST00000512756 EFHBQ8N7U6 833 aa13.09□□□□□ -0.31
COL11A1-210ENST00000512756 CLMNQ96JQ2 1002 aa13.09□□□□□ -0.31
COL11A1-210ENST00000512756 MRPL1Q9BYD6 325 aaKnown RBP13.09□□□□□ -0.31
COL11A1-210ENST00000512756 IL25Q9H293 177 aa13.09□□□□□ -0.31
COL11A1-210ENST00000512756 NDFIP2Q9NV92 336 aa13.09□□□□□ -0.31
COL11A1-210ENST00000512756 TAF6LQ9Y6J9 622 aa13.09□□□□□ -0.31
COL11A1-210ENST00000512756 LMTK2Q8IWU2 1503 aa13.08□□□□□ -0.31
COL11A1-210ENST00000512756 KCNQ2O43526 872 aa13.08□□□□□ -0.31
COL11A1-210ENST00000512756 KLC1Q07866 573 aa13.08□□□□□ -0.31
COL11A1-210ENST00000512756 RBBP7Q16576 425 aa13.08□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms