RNA–Protein interactions for RNA: ENST00000512656.1

USP46-208, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 3

Gene USP46, Length 467 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-208ENST00000512656 AK2P54819 239 aa7.97□□□□□ -1.13
USP46-208ENST00000512656 PTENP60484 403 aa7.97□□□□□ -1.13
USP46-208ENST00000512656 CYP4A11Q02928 519 aa7.97□□□□□ -1.13
USP46-208ENST00000512656 DPYDQ12882 1025 aa7.97□□□□□ -1.13
USP46-208ENST00000512656 CTTNQ14247 550 aaKnown RBP7.97□□□□□ -1.13
USP46-208ENST00000512656 PTPN14Q15678 1187 aa7.97□□□□□ -1.13
USP46-208ENST00000512656 CYP26C1Q6V0L0 522 aa7.97□□□□□ -1.13
USP46-208ENST00000512656 C20orf204Q6ZNR8 217 aa7.97□□□□□ -1.13
USP46-208ENST00000512656 CCDC149Q6ZUS6 474 aa7.97□□□□□ -1.13
USP46-208ENST00000512656 OTOP3Q7RTS5 596 aa7.97□□□□□ -1.13
USP46-208ENST00000512656 ZNF280BQ86YH2 543 aa7.97□□□□□ -1.13
USP46-208ENST00000512656 C12orf76Q8N812 135 aaPredicted RBP7.97□□□□□ -1.13
USP46-208ENST00000512656 PRSS33Q8NF86 280 aa7.97□□□□□ -1.13
USP46-208ENST00000512656 SLC22A17Q8WUG5 538 aa7.97□□□□□ -1.13
USP46-208ENST00000512656 AUTS2Q8WXX7 1259 aa7.97□□□□□ -1.13
USP46-208ENST00000512656 ASIC4Q96FT7 647 aa7.97□□□□□ -1.13
USP46-208ENST00000512656 HINFPQ9BQA5 517 aa7.97□□□□□ -1.13
USP46-208ENST00000512656 EIF2AK1Q9BQI3 630 aaKnown RBP7.97□□□□□ -1.13
USP46-208ENST00000512656 MINDY3Q9H8M7 445 aa7.97□□□□□ -1.13
USP46-208ENST00000512656 SFXN1Q9H9B4 322 aa7.97□□□□□ -1.13
USP46-208ENST00000512656 WRAP73Q9P2S5 460 aaPredicted RBP7.97□□□□□ -1.13
USP46-208ENST00000512656 DNAJB4Q9UDY4 337 aa7.97□□□□□ -1.13
USP46-208ENST00000512656 SPTBN4Q9H254 2564 aa7.97□□□□□ -1.13
USP46-208ENST00000512656 ARL5CA6NH57 179 aa7.96□□□□□ -1.14
USP46-208ENST00000512656 NRP1O14786 923 aa7.96□□□□□ -1.14
USP46-208ENST00000512656 INPPL1O15357 1258 aa7.96□□□□□ -1.14
USP46-208ENST00000512656 NEMFO60524 1076 aa7.96□□□□□ -1.14
USP46-208ENST00000512656 DDHD2O94830 711 aa7.96□□□□□ -1.14
USP46-208ENST00000512656 SLITRK3O94933 977 aa7.96□□□□□ -1.14
USP46-208ENST00000512656 CTDNEP1O95476 244 aa7.96□□□□□ -1.14
USP46-208ENST00000512656 POMCP01189 267 aa7.96□□□□□ -1.14
USP46-208ENST00000512656 ALBP02768 609 aa7.96□□□□□ -1.14
USP46-208ENST00000512656 SOD2P04179 222 aa7.96□□□□□ -1.14
USP46-208ENST00000512656 SSBP05455 408 aaKnown RBP eCLIP7.96□□□□□ -1.14
USP46-208ENST00000512656 CNPP09543 421 aaKnown RBP7.96□□□□□ -1.14
USP46-208ENST00000512656 XRCC6P12956 609 aaKnown RBP eCLIP7.96□□□□□ -1.14
USP46-208ENST00000512656 NID1P14543 1247 aa7.96□□□□□ -1.14
USP46-208ENST00000512656 GATA4P43694 442 aa7.96□□□□□ -1.14
USP46-208ENST00000512656 OR1G1P47890 313 aa7.96□□□□□ -1.14
USP46-208ENST00000512656 CLCN4P51793 760 aa7.96□□□□□ -1.14
USP46-208ENST00000512656 SPIRE1Q08AE8 756 aa7.96□□□□□ -1.14
USP46-208ENST00000512656 SAFBQ15424 915 aaKnown RBP eCLIP7.96□□□□□ -1.14
USP46-208ENST00000512656 UBXN11Q5T124 520 aa7.96□□□□□ -1.14
USP46-208ENST00000512656 TMC5Q6UXY8 1006 aa7.96□□□□□ -1.14
USP46-208ENST00000512656 C15orf39Q6ZRI6 1047 aa7.96□□□□□ -1.14
USP46-208ENST00000512656 GPR149Q86SP6 731 aa7.96□□□□□ -1.14
USP46-208ENST00000512656 CMASQ8NFW8 434 aaPredicted RBP7.96□□□□□ -1.14
USP46-208ENST00000512656 BCL7CQ8WUZ0 217 aaPredicted RBP7.96□□□□□ -1.14
USP46-208ENST00000512656 GTF3C6Q969F1 213 aa7.96□□□□□ -1.14
USP46-208ENST00000512656 KLHL5Q96PQ7 755 aa7.96□□□□□ -1.14
USP46-208ENST00000512656 NACC1Q96RE7 527 aa7.96□□□□□ -1.14
USP46-208ENST00000512656 RPS6KC1Q96S38 1066 aa7.96□□□□□ -1.14
USP46-208ENST00000512656 HSD17B14Q9BPX1 270 aa7.96□□□□□ -1.14
USP46-208ENST00000512656 COLEC11Q9BWP8 271 aa7.96□□□□□ -1.14
USP46-208ENST00000512656 VN1R3Q9BXE9 311 aa7.96□□□□□ -1.14
USP46-208ENST00000512656 NFKBIZQ9BYH8 718 aa7.96□□□□□ -1.14
USP46-208ENST00000512656 CSRNP2Q9H175 543 aa7.96□□□□□ -1.14
USP46-208ENST00000512656 MFSD1Q9H3U5 465 aa7.96□□□□□ -1.14
USP46-208ENST00000512656 TTC12Q9H892 705 aaPredicted RBP7.96□□□□□ -1.14
USP46-208ENST00000512656 GJB4Q9NTQ9 266 aa7.96□□□□□ -1.14
USP46-208ENST00000512656 GIT1Q9Y2X7 761 aa7.96□□□□□ -1.14
USP46-208ENST00000512656 PRG3Q9Y2Y8 225 aaPredicted RBP7.96□□□□□ -1.14
USP46-208ENST00000512656 IPPQ9Y573 584 aa7.96□□□□□ -1.14
USP46-208ENST00000512656 ZMYM2Q9UBW7 1377 aa7.96□□□□□ -1.14
USP46-208ENST00000512656 ZBTB39O15060 712 aa7.95□□□□□ -1.14
USP46-208ENST00000512656 TSPAN1O60635 241 aa7.95□□□□□ -1.14
USP46-208ENST00000512656 BRD1O95696 1058 aa7.95□□□□□ -1.14
USP46-208ENST00000512656 GLUD1P00367 558 aa7.95□□□□□ -1.14
USP46-208ENST00000512656 C1RP00736 705 aa7.95□□□□□ -1.14
USP46-208ENST00000512656 WEE2P0C1S8 567 aa7.95□□□□□ -1.14
USP46-208ENST00000512656 FDPSP14324 419 aaKnown RBP7.95□□□□□ -1.14
USP46-208ENST00000512656 EPB42P16452 691 aa7.95□□□□□ -1.14
USP46-208ENST00000512656 ARL2P36404 184 aa7.95□□□□□ -1.14
USP46-208ENST00000512656 TXKP42681 527 aa7.95□□□□□ -1.14
USP46-208ENST00000512656 GLUD2P49448 558 aa7.95□□□□□ -1.14
USP46-208ENST00000512656 VCPP55072 806 aaKnown RBP7.95□□□□□ -1.14
USP46-208ENST00000512656 CREMQ03060 361 aa7.95□□□□□ -1.14
USP46-208ENST00000512656 CAPSQ13938 189 aa7.95□□□□□ -1.14
USP46-208ENST00000512656 EARS2Q5JPH6 523 aaKnown RBP7.95□□□□□ -1.14
USP46-208ENST00000512656 SLC27A1Q6PCB7 646 aa7.95□□□□□ -1.14
USP46-208ENST00000512656 ZBTB8OSQ8IWT0 167 aa7.95□□□□□ -1.14
USP46-208ENST00000512656 DIS3L2Q8IYB7 885 aaKnown RBP7.95□□□□□ -1.14
USP46-208ENST00000512656 COLGALT2Q8IYK4 626 aa7.95□□□□□ -1.14
USP46-208ENST00000512656 GPR65Q8IYL9 337 aa7.95□□□□□ -1.14
USP46-208ENST00000512656 NECAB1Q8N987 351 aa7.95□□□□□ -1.14
USP46-208ENST00000512656 SMG8Q8ND04 991 aaKnown RBP7.95□□□□□ -1.14
USP46-208ENST00000512656 MCPH1Q8NEM0 835 aa7.95□□□□□ -1.14
USP46-208ENST00000512656 HDAC7Q8WUI4 952 aa7.95□□□□□ -1.14
USP46-208ENST00000512656 STAMQ92783 540 aa7.95□□□□□ -1.14
USP46-208ENST00000512656 ATOH1Q92858 354 aaPredicted RBP7.95□□□□□ -1.14
USP46-208ENST00000512656 BHMTQ93088 406 aa7.95□□□□□ -1.14
USP46-208ENST00000512656 CPB2Q96IY4 423 aa7.95□□□□□ -1.14
USP46-208ENST00000512656 GAD1Q99259 594 aa7.95□□□□□ -1.14
USP46-208ENST00000512656 HERC2P3Q9BVR0 1158 aa7.95□□□□□ -1.14
USP46-208ENST00000512656 EIF2AQ9BY44 585 aaKnown RBP7.95□□□□□ -1.14
USP46-208ENST00000512656 TUFT1Q9NNX1 390 aa7.95□□□□□ -1.14
USP46-208ENST00000512656 XPNPEP1Q9NQW7 623 aa7.95□□□□□ -1.14
USP46-208ENST00000512656 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP7.95□□□□□ -1.14
USP46-208ENST00000512656 PRMT7Q9NVM4 692 aaPredicted RBP7.95□□□□□ -1.14
USP46-208ENST00000512656 DMGDHQ9UI17 866 aaKnown RBP7.95□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms