RNA–Protein interactions for RNA: ENST00000512418.5

CCHCR1-229, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 4

Gene CCHCR1, Length 565 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-229ENST00000512418 KXD1Q9BQD3 176 aa16.03■□□□□ 0.16
CCHCR1-229ENST00000512418 FOXQ1Q9C009 403 aa16.03■□□□□ 0.16
CCHCR1-229ENST00000512418 HAPLN2Q9GZV7 340 aa16.03■□□□□ 0.16
CCHCR1-229ENST00000512418 MAFFQ9ULX9 164 aa16.03■□□□□ 0.16
CCHCR1-229ENST00000512418 PCDHB8Q9UN66 801 aa16.03■□□□□ 0.16
CCHCR1-229ENST00000512418 INSL5Q9Y5Q6 135 aa16.03■□□□□ 0.16
CCHCR1-229ENST00000512418 PTPRZ1P23471 2315 aaPredicted RBP16.03■□□□□ 0.16
CCHCR1-229ENST00000512418 FAM186AA6NE01 2351 aa16.02■□□□□ 0.16
CCHCR1-229ENST00000512418 TTC26A0AVF1 554 aa16.02■□□□□ 0.16
CCHCR1-229ENST00000512418 K7ENM7 598 aa16.02■□□□□ 0.16
CCHCR1-229ENST00000512418 HNRNPDLO14979 420 aaKnown RBP16.02■□□□□ 0.16
CCHCR1-229ENST00000512418 ECI2O75521 394 aa16.02■□□□□ 0.16
CCHCR1-229ENST00000512418 LRPAP1P30533 357 aa16.02■□□□□ 0.16
CCHCR1-229ENST00000512418 LONP1P36776 959 aaKnown RBP16.02■□□□□ 0.16
CCHCR1-229ENST00000512418 LIG4P49917 911 aa16.02■□□□□ 0.16
CCHCR1-229ENST00000512418 ZNF131P52739 623 aa16.02■□□□□ 0.16
CCHCR1-229ENST00000512418 PRKCQQ04759 706 aa16.02■□□□□ 0.16
CCHCR1-229ENST00000512418 PPP2R3AQ06190 1150 aa16.02■□□□□ 0.16
CCHCR1-229ENST00000512418 SNW1Q13573 536 aaKnown RBP16.02■□□□□ 0.16
CCHCR1-229ENST00000512418 MLF2Q15773 248 aaPredicted RBP16.02■□□□□ 0.16
CCHCR1-229ENST00000512418 GPBP1Q86WP2 473 aa16.02■□□□□ 0.16
CCHCR1-229ENST00000512418 MCRS1Q96EZ8 462 aa16.02■□□□□ 0.16
CCHCR1-229ENST00000512418 KIF12Q96FN5 646 aa16.02■□□□□ 0.16
CCHCR1-229ENST00000512418 CORO1BQ9BR76 489 aa16.02■□□□□ 0.16
CCHCR1-229ENST00000512418 DDX23Q9BUQ8 820 aaKnown RBP16.02■□□□□ 0.16
CCHCR1-229ENST00000512418 PARVGQ9HBI0 331 aa16.02■□□□□ 0.16
CCHCR1-229ENST00000512418 AFF4Q9UHB7 1163 aaKnown RBP16.02■□□□□ 0.16
CCHCR1-229ENST00000512418 TBX20Q9UMR3 447 aa16.02■□□□□ 0.16
CCHCR1-229ENST00000512418 UBQLN1Q9UMX0 589 aaKnown RBP16.02■□□□□ 0.16
CCHCR1-229ENST00000512418 KANSL1LA0AUZ9 987 aa16.01■□□□□ 0.15
CCHCR1-229ENST00000512418 M0QZQ0 153 aa16.01■□□□□ 0.15
CCHCR1-229ENST00000512418 ZNF197O14709 1029 aa16.01■□□□□ 0.15
CCHCR1-229ENST00000512418 XPOTO43592 962 aaKnown RBP16.01■□□□□ 0.15
CCHCR1-229ENST00000512418 MICAL2O94851 1124 aa16.01■□□□□ 0.15
CCHCR1-229ENST00000512418 FAM13AO94988 1023 aa16.01■□□□□ 0.15
CCHCR1-229ENST00000512418 SEC24AO95486 1093 aa16.01■□□□□ 0.15
CCHCR1-229ENST00000512418 PIGRP01833 764 aa16.01■□□□□ 0.15
CCHCR1-229ENST00000512418 CEBPBP17676 345 aa16.01■□□□□ 0.15
CCHCR1-229ENST00000512418 CYP3A5P20815 502 aa16.01■□□□□ 0.15
CCHCR1-229ENST00000512418 MARCKSP29966 332 aaPredicted RBP16.01■□□□□ 0.15
CCHCR1-229ENST00000512418 TNFSF9P41273 254 aa16.01■□□□□ 0.15
CCHCR1-229ENST00000512418 YWHAHQ04917 246 aaPredicted RBP16.01■□□□□ 0.15
CCHCR1-229ENST00000512418 ZBTB6Q15916 424 aa16.01■□□□□ 0.15
CCHCR1-229ENST00000512418 SLC44A4Q53GD3 710 aa16.01■□□□□ 0.15
CCHCR1-229ENST00000512418 PRSS36Q5K4E3 855 aa16.01■□□□□ 0.15
CCHCR1-229ENST00000512418 ELMOD1Q8N336 334 aa16.01■□□□□ 0.15
CCHCR1-229ENST00000512418 MYCT1Q8N699 235 aa16.01■□□□□ 0.15
CCHCR1-229ENST00000512418 RASSF8Q8NHQ8 419 aa16.01■□□□□ 0.15
CCHCR1-229ENST00000512418 OXCT2Q9BYC2 517 aaPredicted RBP16.01■□□□□ 0.15
CCHCR1-229ENST00000512418 SEMA4AQ9H3S1 761 aa16.01■□□□□ 0.15
CCHCR1-229ENST00000512418 BLOC1S4Q9NUP1 217 aa16.01■□□□□ 0.15
CCHCR1-229ENST00000512418 MIA3Q5JRA6 1907 aa16.01■□□□□ 0.15
CCHCR1-229ENST00000512418 OGTO15294 1046 aa16■□□□□ 0.15
CCHCR1-229ENST00000512418 TRAK2O60296 914 aa16■□□□□ 0.15
CCHCR1-229ENST00000512418 FAM189A1O60320 539 aa16■□□□□ 0.15
CCHCR1-229ENST00000512418 TBCAO75347 108 aaKnown RBP16■□□□□ 0.15
CCHCR1-229ENST00000512418 CPB1P15086 417 aa16■□□□□ 0.15
CCHCR1-229ENST00000512418 GLULP15104 373 aa16■□□□□ 0.15
CCHCR1-229ENST00000512418 PLCG1P19174 1290 aa16■□□□□ 0.15
CCHCR1-229ENST00000512418 ABCD1P33897 745 aa16■□□□□ 0.15
CCHCR1-229ENST00000512418 AARSP49588 968 aaKnown RBP eCLIP16■□□□□ 0.15
CCHCR1-229ENST00000512418 SPAG1Q07617 926 aa16■□□□□ 0.15
CCHCR1-229ENST00000512418 ADCY1Q08828 1119 aa16■□□□□ 0.15
CCHCR1-229ENST00000512418 DHX8Q14562 1220 aaKnown RBP16■□□□□ 0.15
CCHCR1-229ENST00000512418 KARSQ15046 597 aaKnown RBP16■□□□□ 0.15
CCHCR1-229ENST00000512418 IQCEQ6IPM2 695 aa16■□□□□ 0.15
CCHCR1-229ENST00000512418 ZC3H14Q6PJT7 736 aaKnown RBP16■□□□□ 0.15
CCHCR1-229ENST00000512418 PDZD4Q76G19 769 aaPredicted RBP16■□□□□ 0.15
CCHCR1-229ENST00000512418 C1orf210Q8IVY1 113 aa16■□□□□ 0.15
CCHCR1-229ENST00000512418 LRRC15Q8TF66 581 aa16■□□□□ 0.15
CCHCR1-229ENST00000512418 RAD54LQ92698 747 aa16■□□□□ 0.15
CCHCR1-229ENST00000512418 ELSPBP1Q96BH3 223 aa16■□□□□ 0.15
CCHCR1-229ENST00000512418 TSPAN18Q96SJ8 248 aa16■□□□□ 0.15
CCHCR1-229ENST00000512418 OSBPL6Q9BZF3 934 aa16■□□□□ 0.15
CCHCR1-229ENST00000512418 RPF1Q9H9Y2 349 aaKnown RBP16■□□□□ 0.15
CCHCR1-229ENST00000512418 A0A0B4J269 797 aa15.99■□□□□ 0.15
CCHCR1-229ENST00000512418 LACTBL1A8MY62 500 aa15.99■□□□□ 0.15
CCHCR1-229ENST00000512418 OAZ2O95190 189 aa15.99■□□□□ 0.15
CCHCR1-229ENST00000512418 KRT18P05783 430 aaKnown RBP15.99■□□□□ 0.15
CCHCR1-229ENST00000512418 GRIN1Q05586 938 aa15.99■□□□□ 0.15
CCHCR1-229ENST00000512418 TWF1Q12792 350 aa15.99■□□□□ 0.15
CCHCR1-229ENST00000512418 MCM6Q14566 821 aa15.99■□□□□ 0.15
CCHCR1-229ENST00000512418 SF3A1Q15459 793 aaKnown RBP15.99■□□□□ 0.15
CCHCR1-229ENST00000512418 ENOX2Q16206 610 aaKnown RBP15.99■□□□□ 0.15
CCHCR1-229ENST00000512418 CYP4A22Q5TCH4 519 aa15.99■□□□□ 0.15
CCHCR1-229ENST00000512418 ADSSL1Q8N142 457 aa15.99■□□□□ 0.15
CCHCR1-229ENST00000512418 LEMD2Q8NC56 503 aa15.99■□□□□ 0.15
CCHCR1-229ENST00000512418 BEST2Q8NFU1 509 aa15.99■□□□□ 0.15
CCHCR1-229ENST00000512418 TCEAL4Q96EI5 215 aa15.99■□□□□ 0.15
CCHCR1-229ENST00000512418 ZNF512Q96ME7 567 aaPredicted RBP15.99■□□□□ 0.15
CCHCR1-229ENST00000512418 MSTO1Q9BUK6 570 aa15.99■□□□□ 0.15
CCHCR1-229ENST00000512418 BCO2Q9BYV7 579 aa15.99■□□□□ 0.15
CCHCR1-229ENST00000512418 ZHX3Q9H4I2 956 aa15.99■□□□□ 0.15
CCHCR1-229ENST00000512418 COL4A3Q01955 1670 aa15.99■□□□□ 0.15
CCHCR1-229ENST00000512418 LRRN2O75325 713 aa15.98■□□□□ 0.15
CCHCR1-229ENST00000512418 ADRB2P07550 413 aa15.98■□□□□ 0.15
CCHCR1-229ENST00000512418 FCARP24071 287 aa15.98■□□□□ 0.15
CCHCR1-229ENST00000512418 CCR2P41597 374 aa15.98■□□□□ 0.15
CCHCR1-229ENST00000512418 MAGEA9P43362 315 aa15.98■□□□□ 0.15
CCHCR1-229ENST00000512418 UBXN2BQ14CS0 331 aa15.98■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms