RNA–Protein interactions for RNA: ENST00000510377.5

USP38-202, Transcript of ubiquitin specific peptidase 38, humanhuman

TSL 1 (best) BASIC

Gene USP38, Length 4,135 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP38-202ENST00000510377 DNAJC9Q8WXX5 260 aa15.75■□□□□ 0.11
USP38-202ENST00000510377 NAF1Q96HR8 494 aaKnown RBP15.75■□□□□ 0.11
USP38-202ENST00000510377 MCEEQ96PE7 176 aa15.75■□□□□ 0.11
USP38-202ENST00000510377 MYLK2Q9H1R3 596 aa15.75■□□□□ 0.11
USP38-202ENST00000510377 WHRNQ9P202 907 aa15.75■□□□□ 0.11
USP38-202ENST00000510377 TMEM59LQ9UK28 342 aa15.75■□□□□ 0.11
USP38-202ENST00000510377 WDR64B1ANS9 1081 aa15.74■□□□□ 0.11
USP38-202ENST00000510377 EPHB1P54762 984 aa15.74■□□□□ 0.11
USP38-202ENST00000510377 SLC15A2Q16348 729 aa15.74■□□□□ 0.11
USP38-202ENST00000510377 MAGEB18Q96M61 343 aa15.74■□□□□ 0.11
USP38-202ENST00000510377 TTC25Q96NG3 672 aa15.74■□□□□ 0.11
USP38-202ENST00000510377 PCDHB18PQ96TA0 734 aa15.74■□□□□ 0.11
USP38-202ENST00000510377 AGAP1Q9UPQ3 857 aa15.74■□□□□ 0.11
USP38-202ENST00000510377 CHMP2BQ9UQN3 213 aa15.74■□□□□ 0.11
USP38-202ENST00000510377 COPEO14579 308 aa15.74■□□□□ 0.11
USP38-202ENST00000510377 CTCFP49711 727 aaPredicted RBP15.74■□□□□ 0.11
USP38-202ENST00000510377 PKN2Q16513 984 aaKnown RBP15.74■□□□□ 0.11
USP38-202ENST00000510377 NLRP9Q7RTR0 991 aa15.74■□□□□ 0.11
USP38-202ENST00000510377 MTDHQ86UE4 582 aaKnown RBP15.74■□□□□ 0.11
USP38-202ENST00000510377 CCDC125Q86Z20 511 aa15.74■□□□□ 0.11
USP38-202ENST00000510377 CERS5Q8N5B7 392 aa15.74■□□□□ 0.11
USP38-202ENST00000510377 TLCD1Q96CP7 247 aa15.74■□□□□ 0.11
USP38-202ENST00000510377 C10orf88Q9H8K7 445 aa15.74■□□□□ 0.11
USP38-202ENST00000510377 PCDHA3Q9Y5H8 950 aa15.74■□□□□ 0.11
USP38-202ENST00000510377 ENO1P06733 434 aaKnown RBP15.74■□□□□ 0.11
USP38-202ENST00000510377 TAF1BQ53T94 588 aaPredicted RBP15.74■□□□□ 0.11
USP38-202ENST00000510377 C3orf62Q6ZUJ4 267 aa15.74■□□□□ 0.11
USP38-202ENST00000510377 GPD1LQ8N335 351 aa15.74■□□□□ 0.11
USP38-202ENST00000510377 C1orf131Q8NDD1 294 aaKnown RBP15.74■□□□□ 0.11
USP38-202ENST00000510377 SPON1Q9HCB6 807 aa15.74■□□□□ 0.11
USP38-202ENST00000510377 NCANO14594 1321 aa15.73■□□□□ 0.11
USP38-202ENST00000510377 PIK3R2O00459 728 aa15.73■□□□□ 0.11
USP38-202ENST00000510377 POLR2BP30876 1174 aaKnown RBP15.73■□□□□ 0.11
USP38-202ENST00000510377 PCNX4Q63HM2 1172 aa15.73■□□□□ 0.11
USP38-202ENST00000510377 EEPD1Q7L9B9 569 aa15.73■□□□□ 0.11
USP38-202ENST00000510377 PODNQ7Z5L7 613 aa15.73■□□□□ 0.11
USP38-202ENST00000510377 THNSL1Q8IYQ7 743 aa15.73■□□□□ 0.11
USP38-202ENST00000510377 CCDC124Q96CT7 223 aaKnown RBP15.73■□□□□ 0.11
USP38-202ENST00000510377 WDR18Q9BV38 432 aa15.73■□□□□ 0.11
USP38-202ENST00000510377 PCDHA2Q9Y5H9 948 aa15.73■□□□□ 0.11
USP38-202ENST00000510377 HEY1Q9Y5J3 304 aa15.73■□□□□ 0.11
USP38-202ENST00000510377 GZMAP12544 262 aa15.73■□□□□ 0.11
USP38-202ENST00000510377 PSMC5P62195 406 aa15.73■□□□□ 0.11
USP38-202ENST00000510377 KLC1Q07866 573 aa15.73■□□□□ 0.11
USP38-202ENST00000510377 HYIQ5T013 277 aa15.73■□□□□ 0.11
USP38-202ENST00000510377 C6orf89Q6UWU4 347 aa15.73■□□□□ 0.11
USP38-202ENST00000510377 SV2AQ7L0J3 742 aa15.73■□□□□ 0.11
USP38-202ENST00000510377 SPOCK2Q92563 424 aa15.73■□□□□ 0.11
USP38-202ENST00000510377 MTFR1LQ9H019 292 aa15.73■□□□□ 0.11
USP38-202ENST00000510377 TMEM8AQ9HCN3 771 aa15.73■□□□□ 0.11
USP38-202ENST00000510377 RPTORQ8N122 1335 aa15.73■□□□□ 0.11
USP38-202ENST00000510377 HLA-DRAP01903 254 aa15.73■□□□□ 0.11
USP38-202ENST00000510377 SRGAP2CP0DJJ0 459 aa15.73■□□□□ 0.11
USP38-202ENST00000510377 PSMD6Q15008 389 aa15.73■□□□□ 0.11
USP38-202ENST00000510377 SLC7A3Q8WY07 619 aa15.73■□□□□ 0.11
USP38-202ENST00000510377 PPP1R16BQ96T49 567 aa15.73■□□□□ 0.11
USP38-202ENST00000510377 MXRA8Q9BRK3 442 aa15.73■□□□□ 0.11
USP38-202ENST00000510377 TMEM121Q9BTD3 319 aa15.73■□□□□ 0.11
USP38-202ENST00000510377 MYO5AQ9Y4I1 1855 aaKnown RBP15.72■□□□□ 0.11
USP38-202ENST00000510377 NVLO15381 856 aaKnown RBP15.72■□□□□ 0.11
USP38-202ENST00000510377 ETS1P14921 441 aa15.72■□□□□ 0.11
USP38-202ENST00000510377 PGM1P36871 562 aa15.72■□□□□ 0.11
USP38-202ENST00000510377 RCN1Q15293 331 aa15.72■□□□□ 0.11
USP38-202ENST00000510377 HHIPL2Q6UWX4 724 aa15.72■□□□□ 0.11
USP38-202ENST00000510377 ZDHHC24Q6UX98 284 aa15.72■□□□□ 0.11
USP38-202ENST00000510377 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP15.72■□□□□ 0.11
USP38-202ENST00000510377 ATP11CQ8NB49 1132 aa15.72■□□□□ 0.11
USP38-202ENST00000510377 CKAP2Q8WWK9 683 aa15.72■□□□□ 0.11
USP38-202ENST00000510377 ATXN2LQ8WWM7 1075 aaKnown RBP15.72■□□□□ 0.11
USP38-202ENST00000510377 RMDN2Q96LZ7 410 aa15.72■□□□□ 0.11
USP38-202ENST00000510377 DCLK3Q9C098 648 aa15.72■□□□□ 0.11
USP38-202ENST00000510377 ZNF277Q9NRM2 450 aaPredicted RBP15.72■□□□□ 0.11
USP38-202ENST00000510377 RBAKQ9NYW8 714 aaPredicted RBP15.72■□□□□ 0.11
USP38-202ENST00000510377 HEY2Q9UBP5 337 aa15.72■□□□□ 0.11
USP38-202ENST00000510377 PCYOX1Q9UHG3 505 aa15.72■□□□□ 0.11
USP38-202ENST00000510377 SAT1P21673 171 aa15.72■□□□□ 0.11
USP38-202ENST00000510377 MARK3P27448 753 aa15.72■□□□□ 0.11
USP38-202ENST00000510377 ECHS1P30084 290 aa15.72■□□□□ 0.11
USP38-202ENST00000510377 TM4SF1P30408 202 aa15.72■□□□□ 0.11
USP38-202ENST00000510377 SLC1A1P43005 524 aa15.72■□□□□ 0.11
USP38-202ENST00000510377 JAM2P57087 298 aa15.72■□□□□ 0.11
USP38-202ENST00000510377 NFX1Q12986 1120 aaKnown RBP15.72■□□□□ 0.11
USP38-202ENST00000510377 PPP2R5CQ13362 524 aa15.72■□□□□ 0.11
USP38-202ENST00000510377 ATP13A4Q4VNC1 1196 aa15.72■□□□□ 0.11
USP38-202ENST00000510377 SLFN11Q7Z7L1 901 aa15.72■□□□□ 0.11
USP38-202ENST00000510377 FAM160B2Q86V87 743 aa15.72■□□□□ 0.11
USP38-202ENST00000510377 TMEM143Q96AN5 459 aa15.72■□□□□ 0.11
USP38-202ENST00000510377 FAF2Q96CS3 445 aa15.72■□□□□ 0.11
USP38-202ENST00000510377 TSSK1BQ9BXA7 367 aa15.72■□□□□ 0.11
USP38-202ENST00000510377 GRHL1Q9NZI5 618 aa15.72■□□□□ 0.11
USP38-202ENST00000510377 SMG5Q9UPR3 1016 aaKnown RBP15.72■□□□□ 0.11
USP38-202ENST00000510377 PCDHB2Q9Y5E7 798 aa15.72■□□□□ 0.11
USP38-202ENST00000510377 SLC26A4O43511 780 aa15.72■□□□□ 0.11
USP38-202ENST00000510377 UBTFL6P0CB48 400 aaPredicted RBP15.72■□□□□ 0.11
USP38-202ENST00000510377 KIF22Q14807 665 aa15.72■□□□□ 0.11
USP38-202ENST00000510377 LACTB2Q53H82 288 aaPredicted RBP15.72■□□□□ 0.11
USP38-202ENST00000510377 KCNT1Q5JUK3 1230 aa15.72■□□□□ 0.11
USP38-202ENST00000510377 C1orf146Q5VVC0 180 aa15.72■□□□□ 0.11
USP38-202ENST00000510377 SYDE1Q6ZW31 735 aaPredicted RBP15.72■□□□□ 0.11
USP38-202ENST00000510377 RBBP8NLQ8NC74 664 aaPredicted RBP15.72■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms