RNA–Protein interactions for RNA: ENST00000509857.5

TRAPPC11-206, Transcript of trafficking protein particle complex 11, humanhuman

TSL 4

Gene TRAPPC11, Length 548 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-206ENST00000509857 ACTL7AQ9Y615 435 aa8.78□□□□□ -1
TRAPPC11-206ENST00000509857 MADDQ8WXG6 1647 aa8.78□□□□□ -1
TRAPPC11-206ENST00000509857 ZMYM4Q5VZL5 1548 aa8.78□□□□□ -1
TRAPPC11-206ENST00000509857 KIF1BO60333 1816 aa8.77□□□□□ -1
TRAPPC11-206ENST00000509857 CLTCL1P53675 1640 aa8.77□□□□□ -1.01
TRAPPC11-206ENST00000509857 KIF3BO15066 747 aa8.77□□□□□ -1.01
TRAPPC11-206ENST00000509857 IL33O95760 270 aa8.77□□□□□ -1.01
TRAPPC11-206ENST00000509857 S100BP04271 92 aaPredicted RBP8.77□□□□□ -1.01
TRAPPC11-206ENST00000509857 DDCP20711 480 aa8.77□□□□□ -1.01
TRAPPC11-206ENST00000509857 AKAP5P24588 427 aa8.77□□□□□ -1.01
TRAPPC11-206ENST00000509857 MGAT1P26572 445 aa8.77□□□□□ -1.01
TRAPPC11-206ENST00000509857 IL10RAQ13651 578 aa8.77□□□□□ -1.01
TRAPPC11-206ENST00000509857 RALBP1Q15311 655 aa8.77□□□□□ -1.01
TRAPPC11-206ENST00000509857 PPP4R3AQ6IN85 833 aa8.77□□□□□ -1.01
TRAPPC11-206ENST00000509857 EFCAB12Q6NXP0 572 aa8.77□□□□□ -1.01
TRAPPC11-206ENST00000509857 SPRED1Q7Z699 444 aa8.77□□□□□ -1.01
TRAPPC11-206ENST00000509857 OR10H5Q8NGA6 315 aa8.77□□□□□ -1.01
TRAPPC11-206ENST00000509857 IFI44Q8TCB0 444 aa8.77□□□□□ -1.01
TRAPPC11-206ENST00000509857 NSUN6Q8TEA1 469 aaKnown RBP8.77□□□□□ -1.01
TRAPPC11-206ENST00000509857 PGBD4Q96DM1 585 aa8.77□□□□□ -1.01
TRAPPC11-206ENST00000509857 MRGPRX4Q96LA9 322 aa8.77□□□□□ -1.01
TRAPPC11-206ENST00000509857 MRI1Q9BV20 369 aa8.77□□□□□ -1.01
TRAPPC11-206ENST00000509857 SLC23A1Q9UHI7 598 aa8.77□□□□□ -1.01
TRAPPC11-206ENST00000509857 PCDHB1Q9Y5F3 818 aa8.77□□□□□ -1.01
TRAPPC11-206ENST00000509857 REREQ9P2R6 1566 aa8.77□□□□□ -1.01
TRAPPC11-206ENST00000509857 RPGRIP1LQ68CZ1 1315 aa8.77□□□□□ -1.01
TRAPPC11-206ENST00000509857 PNPLA7Q6ZV29 1317 aa8.77□□□□□ -1.01
TRAPPC11-206ENST00000509857 NRXN1Q9ULB1 1477 aa8.77□□□□□ -1.01
TRAPPC11-206ENST00000509857 EIF3AQ14152 1382 aaKnown RBP8.76□□□□□ -1.01
TRAPPC11-206ENST00000509857 RAP2AP10114 183 aa8.76□□□□□ -1.01
TRAPPC11-206ENST00000509857 ATP5JP18859 108 aa8.76□□□□□ -1.01
TRAPPC11-206ENST00000509857 NRN1LQ496H8 165 aa8.76□□□□□ -1.01
TRAPPC11-206ENST00000509857 DACT2Q5SW24 774 aa8.76□□□□□ -1.01
TRAPPC11-206ENST00000509857 PLXDC1Q8IUK5 500 aa8.76□□□□□ -1.01
TRAPPC11-206ENST00000509857 DRC7Q8IY82 874 aa8.76□□□□□ -1.01
TRAPPC11-206ENST00000509857 PRR18Q8N4B5 295 aa8.76□□□□□ -1.01
TRAPPC11-206ENST00000509857 CACTINQ8WUQ7 758 aaKnown RBP8.76□□□□□ -1.01
TRAPPC11-206ENST00000509857 NDC1Q9BTX1 674 aa8.76□□□□□ -1.01
TRAPPC11-206ENST00000509857 SPON1Q9HCB6 807 aa8.76□□□□□ -1.01
TRAPPC11-206ENST00000509857 FRMPD1Q5SYB0 1578 aa8.76□□□□□ -1.01
TRAPPC11-206ENST00000509857 RICTORQ6R327 1708 aa8.76□□□□□ -1.01
TRAPPC11-206ENST00000509857 SCAF11Q99590 1463 aaKnown RBP8.76□□□□□ -1.01
TRAPPC11-206ENST00000509857 IQGAP1P46940 1657 aa8.75□□□□□ -1.01
TRAPPC11-206ENST00000509857 PPRC1Q5VV67 1664 aaKnown RBP8.75□□□□□ -1.01
TRAPPC11-206ENST00000509857 TRIM24O15164 1050 aa8.75□□□□□ -1.01
TRAPPC11-206ENST00000509857 POU2F2P09086 479 aa8.75□□□□□ -1.01
TRAPPC11-206ENST00000509857 PF4V1P10720 104 aa8.75□□□□□ -1.01
TRAPPC11-206ENST00000509857 CTXN1P60606 82 aa8.75□□□□□ -1.01
TRAPPC11-206ENST00000509857 DSC2Q02487 901 aa8.75□□□□□ -1.01
TRAPPC11-206ENST00000509857 RAB39AQ14964 217 aa8.75□□□□□ -1.01
TRAPPC11-206ENST00000509857 ZXDCQ2QGD7 858 aaPredicted RBP8.75□□□□□ -1.01
TRAPPC11-206ENST00000509857 MIIPQ5JXC2 388 aa8.75□□□□□ -1.01
TRAPPC11-206ENST00000509857 ATXN7L2Q5T6C5 722 aaPredicted RBP8.75□□□□□ -1.01
TRAPPC11-206ENST00000509857 SYT12Q8IV01 421 aa8.75□□□□□ -1.01
TRAPPC11-206ENST00000509857 KAT5Q92993 513 aa8.75□□□□□ -1.01
TRAPPC11-206ENST00000509857 ZNF503Q96F45 646 aa8.75□□□□□ -1.01
TRAPPC11-206ENST00000509857 DMRTA2Q96SC8 542 aa8.75□□□□□ -1.01
TRAPPC11-206ENST00000509857 PARPBPQ9NWS1 579 aa8.75□□□□□ -1.01
TRAPPC11-206ENST00000509857 PNMA8BQ9ULN7 279 aaPredicted RBP8.75□□□□□ -1.01
TRAPPC11-206ENST00000509857 ADGRB3O60242 1522 aa8.75□□□□□ -1.01
TRAPPC11-206ENST00000509857 BRD4O60885 1362 aaPredicted RBP8.74□□□□□ -1.01
TRAPPC11-206ENST00000509857 IFT172Q9UG01 1749 aa8.74□□□□□ -1.01
TRAPPC11-206ENST00000509857 SETBP1Q9Y6X0 1596 aa8.74□□□□□ -1.01
TRAPPC11-206ENST00000509857 ABCA6Q8N139 1617 aa8.74□□□□□ -1.01
TRAPPC11-206ENST00000509857 MATN3O15232 486 aa8.74□□□□□ -1.01
TRAPPC11-206ENST00000509857 DTNBO60941 627 aa8.74□□□□□ -1.01
TRAPPC11-206ENST00000509857 RFPL1O75677 317 aa8.74□□□□□ -1.01
TRAPPC11-206ENST00000509857 RPLP2P05387 115 aaKnown RBP8.74□□□□□ -1.01
TRAPPC11-206ENST00000509857 INSRRP14616 1297 aa8.74□□□□□ -1.01
TRAPPC11-206ENST00000509857 ZSCAN20P17040 1043 aaPredicted RBP8.74□□□□□ -1.01
TRAPPC11-206ENST00000509857 TNFRSF1AP19438 455 aa8.74□□□□□ -1.01
TRAPPC11-206ENST00000509857 PDCP20941 246 aa8.74□□□□□ -1.01
TRAPPC11-206ENST00000509857 TMF1P82094 1093 aa8.74□□□□□ -1.01
TRAPPC11-206ENST00000509857 FOXE3Q13461 319 aa8.74□□□□□ -1.01
TRAPPC11-206ENST00000509857 RABL3Q5HYI8 236 aa8.74□□□□□ -1.01
TRAPPC11-206ENST00000509857 USP45Q70EL2 814 aa8.74□□□□□ -1.01
TRAPPC11-206ENST00000509857 RAVER1Q8IY67 606 aaKnown RBP8.74□□□□□ -1.01
TRAPPC11-206ENST00000509857 RNF169Q8NCN4 708 aa8.74□□□□□ -1.01
TRAPPC11-206ENST00000509857 TMX3Q96JJ7 454 aa8.74□□□□□ -1.01
TRAPPC11-206ENST00000509857 CALCOCO1Q9P1Z2 691 aa8.74□□□□□ -1.01
TRAPPC11-206ENST00000509857 ZNF180Q9UJW8 692 aa8.74□□□□□ -1.01
TRAPPC11-206ENST00000509857 ABCC3O15438 1527 aa8.74□□□□□ -1.01
TRAPPC11-206ENST00000509857 DIP2CQ9Y2E4 1556 aa8.73□□□□□ -1.01
TRAPPC11-206ENST00000509857 NOS1P29475 1434 aa8.73□□□□□ -1.01
TRAPPC11-206ENST00000509857 TTC7BQ86TV6 843 aa8.73□□□□□ -1.01
TRAPPC11-206ENST00000509857 RSPH3Q86UC2 560 aa8.73□□□□□ -1.01
TRAPPC11-206ENST00000509857 DCBLD1Q8N8Z6 715 aa8.73□□□□□ -1.01
TRAPPC11-206ENST00000509857 RAB24Q969Q5 203 aa8.73□□□□□ -1.01
TRAPPC11-206ENST00000509857 TESK2Q96S53 571 aa8.73□□□□□ -1.01
TRAPPC11-206ENST00000509857 AGLP35573 1532 aa8.73□□□□□ -1.01
TRAPPC11-206ENST00000509857 ZBED9Q6R2W3 1325 aa8.73□□□□□ -1.01
TRAPPC11-206ENST00000509857 NPC1L1Q9UHC9 1359 aa8.73□□□□□ -1.01
TRAPPC11-206ENST00000509857 RIMBP3CA6NJZ7 1639 aa8.72□□□□□ -1.01
TRAPPC11-206ENST00000509857 RIMBP3BA6NNM3 1639 aa8.72□□□□□ -1.01
TRAPPC11-206ENST00000509857 RIMBP3Q9UFD9 1639 aa8.72□□□□□ -1.01
TRAPPC11-206ENST00000509857 LEFTY2O00292 366 aa8.72□□□□□ -1.01
TRAPPC11-206ENST00000509857 PEX11BO96011 259 aa8.72□□□□□ -1.01
TRAPPC11-206ENST00000509857 C1SP09871 688 aa8.72□□□□□ -1.01
TRAPPC11-206ENST00000509857 APOBEC3AP31941 199 aaPredicted RBP8.72□□□□□ -1.01
TRAPPC11-206ENST00000509857 FXR1P51114 621 aaKnown RBP eCLIP8.72□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms