RNA–Protein interactions for RNA: ENST00000509101.1

CXCL1-202, Transcript of C-X-C motif chemokine ligand 1, humanhuman

TSL 3

Gene CXCL1, Length 574 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1-202ENST00000509101 ADRB1P08588 477 aa17.53■□□□□ 0.4
CXCL1-202ENST00000509101 OR52Z1P0C646 297 aa17.53■□□□□ 0.4
CXCL1-202ENST00000509101 MYL4P12829 197 aa17.53■□□□□ 0.4
CXCL1-202ENST00000509101 VIPR2P41587 438 aa17.53■□□□□ 0.4
CXCL1-202ENST00000509101 SATB1Q01826 763 aa17.53■□□□□ 0.4
CXCL1-202ENST00000509101 TWF1Q12792 350 aa17.53■□□□□ 0.4
CXCL1-202ENST00000509101 ME3Q16798 604 aa17.53■□□□□ 0.4
CXCL1-202ENST00000509101 CTXN3Q4LDR2 81 aa17.53■□□□□ 0.4
CXCL1-202ENST00000509101 CYP4A22Q5TCH4 519 aa17.53■□□□□ 0.4
CXCL1-202ENST00000509101 IQCEQ6IPM2 695 aa17.53■□□□□ 0.4
CXCL1-202ENST00000509101 CELF5Q8N6W0 485 aaKnown RBP17.53■□□□□ 0.4
CXCL1-202ENST00000509101 DEPDC1BQ8WUY9 529 aa17.53■□□□□ 0.4
CXCL1-202ENST00000509101 KIFAP3Q92845 792 aa17.53■□□□□ 0.4
CXCL1-202ENST00000509101 BHMT2Q9H2M3 363 aa17.53■□□□□ 0.4
CXCL1-202ENST00000509101 GREB1Q4ZG55 1949 aa17.53■□□□□ 0.4
CXCL1-202ENST00000509101 K7ERI5 159 aa17.52■□□□□ 0.4
CXCL1-202ENST00000509101 MOSPD3O75425 235 aa17.52■□□□□ 0.4
CXCL1-202ENST00000509101 GUCY1B3Q02153 619 aa17.52■□□□□ 0.4
CXCL1-202ENST00000509101 ECM1Q16610 540 aa17.52■□□□□ 0.4
CXCL1-202ENST00000509101 XKR4Q5GH76 650 aa17.52■□□□□ 0.4
CXCL1-202ENST00000509101 PPM1JQ5JR12 505 aa17.52■□□□□ 0.4
CXCL1-202ENST00000509101 TPGS2Q68CL5 300 aa17.52■□□□□ 0.4
CXCL1-202ENST00000509101 HAUS3Q68CZ6 603 aa17.52■□□□□ 0.4
CXCL1-202ENST00000509101 ZNF280DQ6N043 979 aa17.52■□□□□ 0.4
CXCL1-202ENST00000509101 ALKAL1Q6UXT8 129 aa17.52■□□□□ 0.4
CXCL1-202ENST00000509101 ZSCAN18Q8TBC5 510 aaPredicted RBP17.52■□□□□ 0.4
CXCL1-202ENST00000509101 NETO1Q8TDF5 533 aa17.52■□□□□ 0.4
CXCL1-202ENST00000509101 C18orf25Q96B23 403 aaPredicted RBP17.52■□□□□ 0.4
CXCL1-202ENST00000509101 ACO2Q99798 780 aaKnown RBP17.52■□□□□ 0.4
CXCL1-202ENST00000509101 SLITRK6Q9H5Y7 841 aa17.52■□□□□ 0.4
CXCL1-202ENST00000509101 TRPV5Q9NQA5 729 aa17.52■□□□□ 0.4
CXCL1-202ENST00000509101 ASAH2Q9NR71 780 aa17.52■□□□□ 0.4
CXCL1-202ENST00000509101 CEP72Q9P209 647 aa17.52■□□□□ 0.4
CXCL1-202ENST00000509101 SPAG17Q6Q759 2223 aa17.51■□□□□ 0.39
CXCL1-202ENST00000509101 LOC105378220A0A1B0GUY1 285 aaPredicted RBP17.51■□□□□ 0.39
CXCL1-202ENST00000509101 CCDC169A6NNP5 214 aa17.51■□□□□ 0.39
CXCL1-202ENST00000509101 SLC30A4O14863 429 aa17.51■□□□□ 0.39
CXCL1-202ENST00000509101 ZNF263O14978 683 aa17.51■□□□□ 0.39
CXCL1-202ENST00000509101 RETP07949 1114 aa17.51■□□□□ 0.39
CXCL1-202ENST00000509101 CHRNB1P11230 501 aa17.51■□□□□ 0.39
CXCL1-202ENST00000509101 HARSP12081 509 aaKnown RBP17.51■□□□□ 0.39
CXCL1-202ENST00000509101 CPB1P15086 417 aa17.51■□□□□ 0.39
CXCL1-202ENST00000509101 ANK1P16157 1881 aa17.51■□□□□ 0.39
CXCL1-202ENST00000509101 CCNE1P24864 410 aa17.51■□□□□ 0.39
CXCL1-202ENST00000509101 MCM4P33991 863 aa17.51■□□□□ 0.39
CXCL1-202ENST00000509101 CCT6AP40227 531 aaKnown RBP17.51■□□□□ 0.39
CXCL1-202ENST00000509101 CXCL12P48061 93 aa17.51■□□□□ 0.39
CXCL1-202ENST00000509101 DMWDQ09019 674 aa17.51■□□□□ 0.39
CXCL1-202ENST00000509101 SRSF5Q13243 272 aaKnown RBP17.51■□□□□ 0.39
CXCL1-202ENST00000509101 SIM2Q14190 667 aaPredicted RBP17.51■□□□□ 0.39
CXCL1-202ENST00000509101 MRPL58Q14197 206 aaKnown RBP17.51■□□□□ 0.39
CXCL1-202ENST00000509101 GAS6Q14393 721 aa17.51■□□□□ 0.39
CXCL1-202ENST00000509101 TEAD2Q15562 447 aa17.51■□□□□ 0.39
CXCL1-202ENST00000509101 ZNF174Q15697 407 aa17.51■□□□□ 0.39
CXCL1-202ENST00000509101 ST3GAL2Q16842 350 aa17.51■□□□□ 0.39
CXCL1-202ENST00000509101 MAMSTRQ6ZN01 415 aa17.51■□□□□ 0.39
CXCL1-202ENST00000509101 ARHGAP30Q7Z6I6 1101 aaPredicted RBP17.51■□□□□ 0.39
CXCL1-202ENST00000509101 ZNF512Q96ME7 567 aaPredicted RBP17.51■□□□□ 0.39
CXCL1-202ENST00000509101 SEMA4GQ9NTN9 838 aa17.51■□□□□ 0.39
CXCL1-202ENST00000509101 DAXXQ9UER7 740 aaPredicted RBP17.51■□□□□ 0.39
CXCL1-202ENST00000509101 AFF4Q9UHB7 1163 aaKnown RBP17.51■□□□□ 0.39
CXCL1-202ENST00000509101 TSC2P49815 1807 aa17.5■□□□□ 0.39
CXCL1-202ENST00000509101 HEPACAM2A8MVW5 462 aa17.5■□□□□ 0.39
CXCL1-202ENST00000509101 CHURC1-FNTBB4DL54 471 aa17.5■□□□□ 0.39
CXCL1-202ENST00000509101 LRP3O75074 770 aa17.5■□□□□ 0.39
CXCL1-202ENST00000509101 KCNA4P22459 653 aa17.5■□□□□ 0.39
CXCL1-202ENST00000509101 FNTBP49356 437 aa17.5■□□□□ 0.39
CXCL1-202ENST00000509101 PEX3P56589 373 aa17.5■□□□□ 0.39
CXCL1-202ENST00000509101 PRR23CQ6ZRP0 262 aa17.5■□□□□ 0.39
CXCL1-202ENST00000509101 SHKBP1Q8TBC3 707 aa17.5■□□□□ 0.39
CXCL1-202ENST00000509101 SUSD3Q96L08 255 aa17.5■□□□□ 0.39
CXCL1-202ENST00000509101 TARS2Q9BW92 718 aaKnown RBP17.5■□□□□ 0.39
CXCL1-202ENST00000509101 MRPL4Q9BYD3 311 aaKnown RBP17.5■□□□□ 0.39
CXCL1-202ENST00000509101 TRPV4Q9HBA0 871 aa17.5■□□□□ 0.39
CXCL1-202ENST00000509101 PTPRHQ9HD43 1115 aa17.5■□□□□ 0.39
CXCL1-202ENST00000509101 RBM12Q9NTZ6 932 aaKnown RBP17.5■□□□□ 0.39
CXCL1-202ENST00000509101 CNTN3Q9P232 1028 aa17.5■□□□□ 0.39
CXCL1-202ENST00000509101 YIPF1Q9Y548 306 aa17.5■□□□□ 0.39
CXCL1-202ENST00000509101 CNOT1A5YKK6 2376 aaKnown RBP17.49■□□□□ 0.39
CXCL1-202ENST00000509101 SLC38A8A6NNN8 435 aa17.49■□□□□ 0.39
CXCL1-202ENST00000509101 ARNTLO00327 626 aa17.49■□□□□ 0.39
CXCL1-202ENST00000509101 MCF2P10911 925 aa17.49■□□□□ 0.39
CXCL1-202ENST00000509101 KCNE1P15382 129 aa17.49■□□□□ 0.39
CXCL1-202ENST00000509101 MUTP22033 750 aa17.49■□□□□ 0.39
CXCL1-202ENST00000509101 NPTX2P47972 431 aa17.49■□□□□ 0.39
CXCL1-202ENST00000509101 SOX9P48436 509 aa17.49■□□□□ 0.39
CXCL1-202ENST00000509101 EPHA5P54756 1037 aa17.49■□□□□ 0.39
CXCL1-202ENST00000509101 PTGDRQ13258 359 aa17.49■□□□□ 0.39
CXCL1-202ENST00000509101 SAFBQ15424 915 aaKnown RBP eCLIP17.49■□□□□ 0.39
CXCL1-202ENST00000509101 RNF19BQ6ZMZ0 732 aa17.49■□□□□ 0.39
CXCL1-202ENST00000509101 Q6ZS52 159 aa17.49■□□□□ 0.39
CXCL1-202ENST00000509101 TAS1R3Q7RTX0 852 aa17.49■□□□□ 0.39
CXCL1-202ENST00000509101 MFSD6LQ8IWD5 586 aa17.49■□□□□ 0.39
CXCL1-202ENST00000509101 YAF2Q8IY57 180 aa17.49■□□□□ 0.39
CXCL1-202ENST00000509101 SPEM1Q8N4L4 309 aa17.49■□□□□ 0.39
CXCL1-202ENST00000509101 LEMD2Q8NC56 503 aa17.49■□□□□ 0.39
CXCL1-202ENST00000509101 CSGALNACT1Q8TDX6 532 aa17.49■□□□□ 0.39
CXCL1-202ENST00000509101 DDX12PQ92771 950 aa17.49■□□□□ 0.39
CXCL1-202ENST00000509101 RSPRY1Q96DX4 576 aa17.49■□□□□ 0.39
CXCL1-202ENST00000509101 TBC1D32Q96NH3 1257 aa17.49■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms