RNA–Protein interactions for RNA: ENST00000508848.5

POLR2J3-213, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 5

Gene POLR2J3, Length 1,030 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-213ENST00000508848 EDRF1Q3B7T1 1238 aa11.48□□□□□ -0.57
POLR2J3-213ENST00000508848 TPRNQ4KMQ1 711 aa11.48□□□□□ -0.57
POLR2J3-213ENST00000508848 SEZ6Q53EL9 994 aa11.48□□□□□ -0.57
POLR2J3-213ENST00000508848 GLRA4Q5JXX5 417 aa11.48□□□□□ -0.57
POLR2J3-213ENST00000508848 ZNF658Q5TYW1 1059 aaPredicted RBP11.48□□□□□ -0.57
POLR2J3-213ENST00000508848 FAM171A1Q5VUB5 890 aa11.48□□□□□ -0.57
POLR2J3-213ENST00000508848 PLPP4Q5VZY2 271 aa11.48□□□□□ -0.57
POLR2J3-213ENST00000508848 JADE1Q6IE81 842 aa11.48□□□□□ -0.57
POLR2J3-213ENST00000508848 CENPPQ6IPU0 288 aa11.48□□□□□ -0.57
POLR2J3-213ENST00000508848 TAS1R1Q7RTX1 841 aa11.48□□□□□ -0.57
POLR2J3-213ENST00000508848 LRRC52Q8N7C0 313 aa11.48□□□□□ -0.57
POLR2J3-213ENST00000508848 SMRP1Q8NCR6 262 aa11.48□□□□□ -0.57
POLR2J3-213ENST00000508848 LNX1Q8TBB1 728 aaPredicted RBP11.48□□□□□ -0.57
POLR2J3-213ENST00000508848 PPM1EQ8WY54 764 aa11.48□□□□□ -0.57
POLR2J3-213ENST00000508848 C18orf25Q96B23 403 aaPredicted RBP11.48□□□□□ -0.57
POLR2J3-213ENST00000508848 RBAKQ9NYW8 714 aaPredicted RBP11.48□□□□□ -0.57
POLR2J3-213ENST00000508848 CLEC1BQ9P126 229 aa11.48□□□□□ -0.57
POLR2J3-213ENST00000508848 PCDHA5Q9Y5H7 936 aa11.48□□□□□ -0.57
POLR2J3-213ENST00000508848 HCFC2Q9Y5Z7 792 aa11.48□□□□□ -0.57
POLR2J3-213ENST00000508848 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP11.47□□□□□ -0.57
POLR2J3-213ENST00000508848 GRXCR2A6NFK2 248 aa11.47□□□□□ -0.57
POLR2J3-213ENST00000508848 H7C4K7 107 aa11.47□□□□□ -0.57
POLR2J3-213ENST00000508848 IKBKBO14920 756 aa11.47□□□□□ -0.57
POLR2J3-213ENST00000508848 TEX28O15482 410 aa11.47□□□□□ -0.57
POLR2J3-213ENST00000508848 CALUO43852 315 aaPredicted RBP11.47□□□□□ -0.57
POLR2J3-213ENST00000508848 GLP2RO95838 553 aa11.47□□□□□ -0.57
POLR2J3-213ENST00000508848 CYP11A1P05108 521 aa11.47□□□□□ -0.57
POLR2J3-213ENST00000508848 POU2F2P09086 479 aa11.47□□□□□ -0.57
POLR2J3-213ENST00000508848 TYMPP19971 482 aa11.47□□□□□ -0.57
POLR2J3-213ENST00000508848 SNRNP35Q16560 246 aaKnown RBP11.47□□□□□ -0.57
POLR2J3-213ENST00000508848 ZCWPW2Q504Y3 356 aa11.47□□□□□ -0.57
POLR2J3-213ENST00000508848 C9orf57Q5W0N0 161 aa11.47□□□□□ -0.57
POLR2J3-213ENST00000508848 SLC8B1Q6J4K2 584 aa11.47□□□□□ -0.57
POLR2J3-213ENST00000508848 C15orf39Q6ZRI6 1047 aa11.47□□□□□ -0.57
POLR2J3-213ENST00000508848 DPH6Q7L8W6 267 aa11.47□□□□□ -0.57
POLR2J3-213ENST00000508848 USP37Q86T82 979 aa11.47□□□□□ -0.57
POLR2J3-213ENST00000508848 WDR49Q8IV35 697 aa11.47□□□□□ -0.57
POLR2J3-213ENST00000508848 TRIML1Q8N9V2 468 aa11.47□□□□□ -0.57
POLR2J3-213ENST00000508848 C3orf58Q8NDZ4 430 aa11.47□□□□□ -0.57
POLR2J3-213ENST00000508848 GADD45GIP1Q8TAE8 222 aaPredicted RBP11.47□□□□□ -0.57
POLR2J3-213ENST00000508848 CXorf38Q8TB03 319 aa11.47□□□□□ -0.57
POLR2J3-213ENST00000508848 TMC2Q8TDI7 906 aa11.47□□□□□ -0.57
POLR2J3-213ENST00000508848 SMARCE1Q969G3 411 aa11.47□□□□□ -0.57
POLR2J3-213ENST00000508848 MKNK1Q9BUB5 465 aa11.47□□□□□ -0.57
POLR2J3-213ENST00000508848 S1PR5Q9H228 398 aa11.47□□□□□ -0.57
POLR2J3-213ENST00000508848 IKZF4Q9H2S9 585 aa11.47□□□□□ -0.57
POLR2J3-213ENST00000508848 INTS13Q9NVM9 706 aa11.47□□□□□ -0.57
POLR2J3-213ENST00000508848 GDAP2Q9NXN4 497 aa11.47□□□□□ -0.57
POLR2J3-213ENST00000508848 DPP3Q9NY33 737 aa11.47□□□□□ -0.57
POLR2J3-213ENST00000508848 CLDND1Q9NY35 253 aa11.47□□□□□ -0.57
POLR2J3-213ENST00000508848 MTRRQ9UBK8 725 aa11.47□□□□□ -0.57
POLR2J3-213ENST00000508848 CD207Q9UJ71 328 aa11.47□□□□□ -0.57
POLR2J3-213ENST00000508848 ITGA11Q9UKX5 1188 aa11.47□□□□□ -0.57
POLR2J3-213ENST00000508848 DSEQ9UL01 958 aa11.47□□□□□ -0.57
POLR2J3-213ENST00000508848 PCDHB8Q9UN66 801 aa11.47□□□□□ -0.57
POLR2J3-213ENST00000508848 VCANP13611 3396 aa11.46□□□□□ -0.57
POLR2J3-213ENST00000508848 F8W810 466 aa11.46□□□□□ -0.57
POLR2J3-213ENST00000508848 PER2O15055 1255 aa11.46□□□□□ -0.57
POLR2J3-213ENST00000508848 GADD45BO75293 160 aaPredicted RBP11.46□□□□□ -0.57
POLR2J3-213ENST00000508848 STAU1O95793 577 aaKnown RBP11.46□□□□□ -0.57
POLR2J3-213ENST00000508848 PRR29P0C7W0 189 aa11.46□□□□□ -0.57
POLR2J3-213ENST00000508848 KCNA5P22460 613 aa11.46□□□□□ -0.57
POLR2J3-213ENST00000508848 KLRC2P26717 231 aa11.46□□□□□ -0.57
POLR2J3-213ENST00000508848 HOXA9P31269 272 aa11.46□□□□□ -0.57
POLR2J3-213ENST00000508848 GTF2F1P35269 517 aaKnown RBP eCLIP11.46□□□□□ -0.57
POLR2J3-213ENST00000508848 SMAD4Q13485 552 aaKnown RBP11.46□□□□□ -0.57
POLR2J3-213ENST00000508848 SMAD2Q15796 467 aaKnown RBP11.46□□□□□ -0.57
POLR2J3-213ENST00000508848 RTP2Q5QGT7 225 aa11.46□□□□□ -0.57
POLR2J3-213ENST00000508848 TPGS2Q68CL5 300 aa11.46□□□□□ -0.57
POLR2J3-213ENST00000508848 ANKRD54Q6NXT1 300 aa11.46□□□□□ -0.57
POLR2J3-213ENST00000508848 RBM23Q86U06 439 aaKnown RBP11.46□□□□□ -0.57
POLR2J3-213ENST00000508848 ZNF461Q8TAF7 563 aa11.46□□□□□ -0.57
POLR2J3-213ENST00000508848 RIN2Q8WYP3 895 aaPredicted RBP11.46□□□□□ -0.57
POLR2J3-213ENST00000508848 SUSD6Q92537 303 aa11.46□□□□□ -0.57
POLR2J3-213ENST00000508848 BORCS6Q96GS4 357 aa11.46□□□□□ -0.57
POLR2J3-213ENST00000508848 DHTKD1Q96HY7 919 aaPredicted RBP11.46□□□□□ -0.57
POLR2J3-213ENST00000508848 NECTIN4Q96NY8 510 aa11.46□□□□□ -0.57
POLR2J3-213ENST00000508848 GBP4Q96PP9 640 aa11.46□□□□□ -0.57
POLR2J3-213ENST00000508848 CLSTN3Q9BQT9 956 aa11.46□□□□□ -0.57
POLR2J3-213ENST00000508848 ADAM7Q9H2U9 754 aa11.46□□□□□ -0.57
POLR2J3-213ENST00000508848 GOLGA2P5Q9HBQ8 144 aa11.46□□□□□ -0.57
POLR2J3-213ENST00000508848 TSHZ2Q9NRE2 1034 aa11.46□□□□□ -0.57
POLR2J3-213ENST00000508848 ZDHHC7Q9NXF8 308 aa11.46□□□□□ -0.57
POLR2J3-213ENST00000508848 HSFX1Q9UBD0 423 aa11.46□□□□□ -0.57
POLR2J3-213ENST00000508848 NUB1Q9Y5A7 615 aa11.46□□□□□ -0.57
POLR2J3-213ENST00000508848 SPTBN5Q9NRC6 3674 aaKnown RBP11.45□□□□□ -0.58
POLR2J3-213ENST00000508848 TCF20Q9UGU0 1960 aaKnown RBP11.45□□□□□ -0.58
POLR2J3-213ENST00000508848 PLXNA3P51805 1871 aa11.45□□□□□ -0.58
POLR2J3-213ENST00000508848 MBTPS2O43462 519 aa11.45□□□□□ -0.58
POLR2J3-213ENST00000508848 EXOC3O60645 756 aa11.45□□□□□ -0.58
POLR2J3-213ENST00000508848 TBX10O75333 385 aa11.45□□□□□ -0.58
POLR2J3-213ENST00000508848 ABLIM3O94929 683 aa11.45□□□□□ -0.58
POLR2J3-213ENST00000508848 NFICP08651 508 aa11.45□□□□□ -0.58
POLR2J3-213ENST00000508848 HNRNPA1P09651 372 aaKnown RBP eCLIP11.45□□□□□ -0.58
POLR2J3-213ENST00000508848 RBP5P82980 135 aa11.45□□□□□ -0.58
POLR2J3-213ENST00000508848 LRRC63Q05C16 580 aa11.45□□□□□ -0.58
POLR2J3-213ENST00000508848 DLX2Q07687 328 aaPredicted RBP11.45□□□□□ -0.58
POLR2J3-213ENST00000508848 CYP24A1Q07973 514 aa11.45□□□□□ -0.58
POLR2J3-213ENST00000508848 SMARCB1Q12824 385 aa11.45□□□□□ -0.58
POLR2J3-213ENST00000508848 PNOCQ13519 176 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms