RNA–Protein interactions for RNA: ENST00000508584.1

NFKB1-207, Transcript of nuclear factor kappa B subunit 1, humanhuman

TSL 3

Gene NFKB1, Length 751 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-207ENST00000508584 HAUS4Q9H6D7 363 aa17.25■□□□□ 0.35
NFKB1-207ENST00000508584 PRDM5Q9NQX1 630 aaPredicted RBP17.25■□□□□ 0.35
NFKB1-207ENST00000508584 CNTN3Q9P232 1028 aa17.25■□□□□ 0.35
NFKB1-207ENST00000508584 RBAK-RBAKDNI3L0D1 243 aa17.24■□□□□ 0.35
NFKB1-207ENST00000508584 IPO7O95373 1038 aaKnown RBP17.24■□□□□ 0.35
NFKB1-207ENST00000508584 KRT19P08727 400 aa17.24■□□□□ 0.35
NFKB1-207ENST00000508584 SELPP16109 830 aa17.24■□□□□ 0.35
NFKB1-207ENST00000508584 TBXAS1P24557 533 aaPredicted RBP17.24■□□□□ 0.35
NFKB1-207ENST00000508584 ANXA13P27216 316 aa17.24■□□□□ 0.35
NFKB1-207ENST00000508584 KRT83P78385 493 aa17.24■□□□□ 0.35
NFKB1-207ENST00000508584 CUL2Q13617 745 aa17.24■□□□□ 0.35
NFKB1-207ENST00000508584 DSC3Q14574 896 aa17.24■□□□□ 0.35
NFKB1-207ENST00000508584 ASTE1Q2TB18 679 aaPredicted RBP17.24■□□□□ 0.35
NFKB1-207ENST00000508584 ZNF699Q32M78 642 aa17.24■□□□□ 0.35
NFKB1-207ENST00000508584 TRIM60Q495X7 471 aa17.24■□□□□ 0.35
NFKB1-207ENST00000508584 SCARA3Q6AZY7 606 aa17.24■□□□□ 0.35
NFKB1-207ENST00000508584 LRRC8DQ7L1W4 858 aa17.24■□□□□ 0.35
NFKB1-207ENST00000508584 FAM71AQ8IYT1 594 aa17.24■□□□□ 0.35
NFKB1-207ENST00000508584 JAKMIP2Q96AA8 810 aa17.24■□□□□ 0.35
NFKB1-207ENST00000508584 FAM105AQ9NUU6 356 aa17.24■□□□□ 0.35
NFKB1-207ENST00000508584 MTMR10Q9NXD2 777 aa17.24■□□□□ 0.35
NFKB1-207ENST00000508584 DPP3Q9NY33 737 aa17.24■□□□□ 0.35
NFKB1-207ENST00000508584 SIX4Q9UIU6 781 aa17.24■□□□□ 0.35
NFKB1-207ENST00000508584 ITGA11Q9UKX5 1188 aa17.24■□□□□ 0.35
NFKB1-207ENST00000508584 NUB1Q9Y5A7 615 aa17.24■□□□□ 0.35
NFKB1-207ENST00000508584 GOLGA6L9A6NEM1 432 aa17.23■□□□□ 0.35
NFKB1-207ENST00000508584 PQBP1O60828 265 aaKnown RBP17.23■□□□□ 0.35
NFKB1-207ENST00000508584 ITGB3P05106 788 aa17.23■□□□□ 0.35
NFKB1-207ENST00000508584 ITGA4P13612 1032 aa17.23■□□□□ 0.35
NFKB1-207ENST00000508584 USP8P40818 1118 aa17.23■□□□□ 0.35
NFKB1-207ENST00000508584 RAB27AP51159 221 aa17.23■□□□□ 0.35
NFKB1-207ENST00000508584 RBP5P82980 135 aa17.23■□□□□ 0.35
NFKB1-207ENST00000508584 PTK2Q05397 1052 aa17.23■□□□□ 0.35
NFKB1-207ENST00000508584 MBTPS1Q14703 1052 aa17.23■□□□□ 0.35
NFKB1-207ENST00000508584 SPA17Q15506 151 aa17.23■□□□□ 0.35
NFKB1-207ENST00000508584 XKR4Q5GH76 650 aa17.23■□□□□ 0.35
NFKB1-207ENST00000508584 C1orf53Q5VUE5 145 aa17.23■□□□□ 0.35
NFKB1-207ENST00000508584 ZNF571Q7Z3V5 609 aaPredicted RBP17.23■□□□□ 0.35
NFKB1-207ENST00000508584 REXO1L1PQ8IX06 675 aa17.23■□□□□ 0.35
NFKB1-207ENST00000508584 CXorf38Q8TB03 319 aa17.23■□□□□ 0.35
NFKB1-207ENST00000508584 ZMAT2Q96NC0 199 aaKnown RBP17.23■□□□□ 0.35
NFKB1-207ENST00000508584 TRAIPQ9BWF2 469 aa17.23■□□□□ 0.35
NFKB1-207ENST00000508584 NIF3L1Q9GZT8 377 aa17.23■□□□□ 0.35
NFKB1-207ENST00000508584 XYLT2Q9H1B5 865 aa17.23■□□□□ 0.35
NFKB1-207ENST00000508584 CXCL16Q9H2A7 254 aa17.23■□□□□ 0.35
NFKB1-207ENST00000508584 KLK14Q9P0G3 267 aa17.23■□□□□ 0.35
NFKB1-207ENST00000508584 STXBP5LQ9Y2K9 1186 aa17.23■□□□□ 0.35
NFKB1-207ENST00000508584 REXO2Q9Y3B8 237 aaKnown RBP17.23■□□□□ 0.35
NFKB1-207ENST00000508584 R3HCC1Q9Y3T6 440 aaKnown RBP17.23■□□□□ 0.35
NFKB1-207ENST00000508584 UMODL1Q5DID0 1318 aa17.22■□□□□ 0.35
NFKB1-207ENST00000508584 MGEA5O60502 916 aa17.22■□□□□ 0.35
NFKB1-207ENST00000508584 OFD1O75665 1012 aa17.22■□□□□ 0.35
NFKB1-207ENST00000508584 LCA5LO95447 670 aa17.22■□□□□ 0.35
NFKB1-207ENST00000508584 KCNE1P15382 129 aa17.22■□□□□ 0.35
NFKB1-207ENST00000508584 POLR2BP30876 1174 aaKnown RBP17.22■□□□□ 0.35
NFKB1-207ENST00000508584 ATICP31939 592 aa17.22■□□□□ 0.35
NFKB1-207ENST00000508584 GUCY2FP51841 1108 aa17.22■□□□□ 0.35
NFKB1-207ENST00000508584 ZBTB6Q15916 424 aa17.22■□□□□ 0.35
NFKB1-207ENST00000508584 ANKRD33Q7Z3H0 272 aa17.22■□□□□ 0.35
NFKB1-207ENST00000508584 MRPL10Q7Z7H8 261 aaKnown RBP17.22■□□□□ 0.35
NFKB1-207ENST00000508584 VPS36Q86VN1 386 aa17.22■□□□□ 0.35
NFKB1-207ENST00000508584 BEST2Q8NFU1 509 aa17.22■□□□□ 0.35
NFKB1-207ENST00000508584 ARID3AQ99856 593 aa17.22■□□□□ 0.35
NFKB1-207ENST00000508584 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP17.22■□□□□ 0.35
NFKB1-207ENST00000508584 UBQLN1Q9UMX0 589 aaKnown RBP17.22■□□□□ 0.35
NFKB1-207ENST00000508584 AGAP1Q9UPQ3 857 aa17.22■□□□□ 0.35
NFKB1-207ENST00000508584 SMIM28A0A1B0GU29 152 aa17.21■□□□□ 0.35
NFKB1-207ENST00000508584 DCDC2CA8MYV0 355 aa17.21■□□□□ 0.35
NFKB1-207ENST00000508584 PITPNM1O00562 1244 aa17.21■□□□□ 0.35
NFKB1-207ENST00000508584 XPOTO43592 962 aaKnown RBP17.21■□□□□ 0.35
NFKB1-207ENST00000508584 SKIP12755 728 aa17.21■□□□□ 0.35
NFKB1-207ENST00000508584 KRT5P13647 590 aa17.21■□□□□ 0.35
NFKB1-207ENST00000508584 CYP27A1Q02318 531 aa17.21■□□□□ 0.35
NFKB1-207ENST00000508584 GFPT1Q06210 699 aaPredicted RBP17.21■□□□□ 0.35
NFKB1-207ENST00000508584 GLRA4Q5JXX5 417 aa17.21■□□□□ 0.35
NFKB1-207ENST00000508584 FAM109BQ6ICB4 259 aaPredicted RBP17.21■□□□□ 0.35
NFKB1-207ENST00000508584 TMEM130Q8N3G9 435 aa17.21■□□□□ 0.35
NFKB1-207ENST00000508584 BADQ92934 168 aa17.21■□□□□ 0.35
NFKB1-207ENST00000508584 ADAM2Q99965 735 aa17.21■□□□□ 0.35
NFKB1-207ENST00000508584 TUBGCP4Q9UGJ1 667 aa17.21■□□□□ 0.35
NFKB1-207ENST00000508584 ZNF263O14978 683 aa17.2■□□□□ 0.34
NFKB1-207ENST00000508584 CYP26A1O43174 497 aa17.2■□□□□ 0.34
NFKB1-207ENST00000508584 ZNF623O75123 536 aa17.2■□□□□ 0.34
NFKB1-207ENST00000508584 STAU1O95793 577 aaKnown RBP17.2■□□□□ 0.34
NFKB1-207ENST00000508584 ACO1P21399 889 aaKnown RBP17.2■□□□□ 0.34
NFKB1-207ENST00000508584 TLE2Q04725 743 aa17.2■□□□□ 0.34
NFKB1-207ENST00000508584 SLC18A3Q16572 532 aa17.2■□□□□ 0.34
NFKB1-207ENST00000508584 ZNF667Q5HYK9 610 aa17.2■□□□□ 0.34
NFKB1-207ENST00000508584 SMYD5Q6GMV2 418 aa17.2■□□□□ 0.34
NFKB1-207ENST00000508584 KIAA1328Q86T90 577 aa17.2■□□□□ 0.34
NFKB1-207ENST00000508584 C18orf25Q96B23 403 aaPredicted RBP17.2■□□□□ 0.34
NFKB1-207ENST00000508584 HPDLQ96IR7 371 aa17.2■□□□□ 0.34
NFKB1-207ENST00000508584 FAXDC2Q96IV6 333 aa17.2■□□□□ 0.34
NFKB1-207ENST00000508584 TOX2Q96NM4 488 aa17.2■□□□□ 0.34
NFKB1-207ENST00000508584 IFIH1Q9BYX4 1025 aaKnown RBP17.2■□□□□ 0.34
NFKB1-207ENST00000508584 VRTNQ9H8Y1 702 aa17.2■□□□□ 0.34
NFKB1-207ENST00000508584 GIT1Q9Y2X7 761 aa17.2■□□□□ 0.34
NFKB1-207ENST00000508584 PCDHB4Q9Y5E5 795 aa17.2■□□□□ 0.34
NFKB1-207ENST00000508584 PCDHA13Q9Y5I0 950 aa17.2■□□□□ 0.34
NFKB1-207ENST00000508584 A0A087X0T9 212 aa17.19■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms