RNA–Protein interactions for RNA: ENST00000508319.1

HMGCS1-205, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 3

Gene HMGCS1, Length 591 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-205ENST00000508319 PARVGQ9HBI0 331 aa14.18□□□□□ -0.14
HMGCS1-205ENST00000508319 FBXL5Q9UKA1 691 aa14.18□□□□□ -0.14
HMGCS1-205ENST00000508319 KCNH3Q9ULD8 1083 aa14.18□□□□□ -0.14
HMGCS1-205ENST00000508319 TBX20Q9UMR3 447 aa14.18□□□□□ -0.14
HMGCS1-205ENST00000508319 MIA3Q5JRA6 1907 aa14.17□□□□□ -0.14
HMGCS1-205ENST00000508319 VPS37CA5D8V6 355 aaPredicted RBP14.17□□□□□ -0.14
HMGCS1-205ENST00000508319 H7C4K7 107 aa14.17□□□□□ -0.14
HMGCS1-205ENST00000508319 RHOP08100 348 aa14.17□□□□□ -0.14
HMGCS1-205ENST00000508319 CLTAP09496 248 aa14.17□□□□□ -0.14
HMGCS1-205ENST00000508319 ATF2P15336 505 aa14.17□□□□□ -0.14
HMGCS1-205ENST00000508319 SCP2P22307 547 aa14.17□□□□□ -0.14
HMGCS1-205ENST00000508319 LRPAP1P30533 357 aa14.17□□□□□ -0.14
HMGCS1-205ENST00000508319 MATR3P43243 847 aaKnown RBP eCLIP14.17□□□□□ -0.14
HMGCS1-205ENST00000508319 LIG4P49917 911 aa14.17□□□□□ -0.14
HMGCS1-205ENST00000508319 PTPAQ15257 358 aa14.17□□□□□ -0.14
HMGCS1-205ENST00000508319 ZBTB6Q15916 424 aa14.17□□□□□ -0.14
HMGCS1-205ENST00000508319 CTXN3Q4LDR2 81 aa14.17□□□□□ -0.14
HMGCS1-205ENST00000508319 ZNF280DQ6N043 979 aa14.17□□□□□ -0.14
HMGCS1-205ENST00000508319 TCEAL8Q8IYN2 117 aa14.17□□□□□ -0.14
HMGCS1-205ENST00000508319 MYCT1Q8N699 235 aa14.17□□□□□ -0.14
HMGCS1-205ENST00000508319 DTWD2Q8NBA8 298 aa14.17□□□□□ -0.14
HMGCS1-205ENST00000508319 RASSF8Q8NHQ8 419 aa14.17□□□□□ -0.14
HMGCS1-205ENST00000508319 ING5Q8WYH8 240 aa14.17□□□□□ -0.14
HMGCS1-205ENST00000508319 LARP4BQ92615 738 aaKnown RBP14.17□□□□□ -0.14
HMGCS1-205ENST00000508319 DDX12PQ92771 950 aa14.17□□□□□ -0.14
HMGCS1-205ENST00000508319 KIF12Q96FN5 646 aa14.17□□□□□ -0.14
HMGCS1-205ENST00000508319 CCSER1Q9C0I3 900 aa14.17□□□□□ -0.14
HMGCS1-205ENST00000508319 AVENQ9NQS1 362 aaPredicted RBP14.17□□□□□ -0.14
HMGCS1-205ENST00000508319 ZNF292O60281 2723 aa14.17□□□□□ -0.14
HMGCS1-205ENST00000508319 A0A0B4J269 797 aa14.16□□□□□ -0.14
HMGCS1-205ENST00000508319 M0QZQ0 153 aa14.16□□□□□ -0.14
HMGCS1-205ENST00000508319 PRRG1O14668 218 aa14.16□□□□□ -0.14
HMGCS1-205ENST00000508319 OGTO15294 1046 aa14.16□□□□□ -0.14
HMGCS1-205ENST00000508319 TRAK2O60296 914 aa14.16□□□□□ -0.14
HMGCS1-205ENST00000508319 SEC24AO95486 1093 aa14.16□□□□□ -0.14
HMGCS1-205ENST00000508319 ADRB2P07550 413 aa14.16□□□□□ -0.14
HMGCS1-205ENST00000508319 CYP3A5P20815 502 aa14.16□□□□□ -0.14
HMGCS1-205ENST00000508319 AARSP49588 968 aaKnown RBP eCLIP14.16□□□□□ -0.14
HMGCS1-205ENST00000508319 ARPP19P56211 112 aa14.16□□□□□ -0.14
HMGCS1-205ENST00000508319 GPC5P78333 572 aa14.16□□□□□ -0.14
HMGCS1-205ENST00000508319 PPP2R3AQ06190 1150 aa14.16□□□□□ -0.14
HMGCS1-205ENST00000508319 ANGPT1Q15389 498 aa14.16□□□□□ -0.14
HMGCS1-205ENST00000508319 KYAT1Q16773 422 aa14.16□□□□□ -0.14
HMGCS1-205ENST00000508319 TPGS2Q68CL5 300 aa14.16□□□□□ -0.14
HMGCS1-205ENST00000508319 PHLDB3Q6NSJ2 640 aa14.16□□□□□ -0.14
HMGCS1-205ENST00000508319 USP49Q70CQ1 688 aa14.16□□□□□ -0.14
HMGCS1-205ENST00000508319 MAP4K3Q8IVH8 894 aa14.16□□□□□ -0.14
HMGCS1-205ENST00000508319 APPL2Q8NEU8 664 aa14.16□□□□□ -0.14
HMGCS1-205ENST00000508319 KXD1Q9BQD3 176 aa14.16□□□□□ -0.14
HMGCS1-205ENST00000508319 CYP4F11Q9HBI6 524 aa14.16□□□□□ -0.14
HMGCS1-205ENST00000508319 UBQLN1Q9UMX0 589 aaKnown RBP14.16□□□□□ -0.14
HMGCS1-205ENST00000508319 PCDHB8Q9UN66 801 aa14.16□□□□□ -0.14
HMGCS1-205ENST00000508319 MRPS23Q9Y3D9 190 aaKnown RBP14.16□□□□□ -0.14
HMGCS1-205ENST00000508319 INSL5Q9Y5Q6 135 aa14.16□□□□□ -0.14
HMGCS1-205ENST00000508319 CACNA1IQ9P0X4 2223 aa14.15□□□□□ -0.14
HMGCS1-205ENST00000508319 PRR23AA6NEV1 266 aa14.15□□□□□ -0.14
HMGCS1-205ENST00000508319 LACTBL1A8MY62 500 aa14.15□□□□□ -0.14
HMGCS1-205ENST00000508319 NRG2O14511 850 aaPredicted RBP14.15□□□□□ -0.14
HMGCS1-205ENST00000508319 TBCAO75347 108 aaKnown RBP14.15□□□□□ -0.14
HMGCS1-205ENST00000508319 LRG1P02750 347 aa14.15□□□□□ -0.14
HMGCS1-205ENST00000508319 KRT18P05783 430 aaKnown RBP14.15□□□□□ -0.14
HMGCS1-205ENST00000508319 CEBPBP17676 345 aa14.15□□□□□ -0.14
HMGCS1-205ENST00000508319 PDCP20941 246 aa14.15□□□□□ -0.14
HMGCS1-205ENST00000508319 RFX1P22670 979 aa14.15□□□□□ -0.14
HMGCS1-205ENST00000508319 NMT1P30419 496 aaKnown RBP14.15□□□□□ -0.14
HMGCS1-205ENST00000508319 ELF1P32519 619 aa14.15□□□□□ -0.14
HMGCS1-205ENST00000508319 GUCY2FP51841 1108 aa14.15□□□□□ -0.14
HMGCS1-205ENST00000508319 GTF2BQ00403 316 aa14.15□□□□□ -0.14
HMGCS1-205ENST00000508319 RESTQ13127 1097 aa14.15□□□□□ -0.14
HMGCS1-205ENST00000508319 PRSS36Q5K4E3 855 aa14.15□□□□□ -0.14
HMGCS1-205ENST00000508319 SPECC1Q5M775 1068 aa14.15□□□□□ -0.14
HMGCS1-205ENST00000508319 ASCL5Q7RTU5 278 aa14.15□□□□□ -0.14
HMGCS1-205ENST00000508319 EPSTI1Q96J88 318 aa14.15□□□□□ -0.14
HMGCS1-205ENST00000508319 MSTO1Q9BUK6 570 aa14.15□□□□□ -0.14
HMGCS1-205ENST00000508319 GDE1Q9NZC3 331 aa14.15□□□□□ -0.14
HMGCS1-205ENST00000508319 DLGAP2Q9P1A6 1054 aa14.15□□□□□ -0.14
HMGCS1-205ENST00000508319 AFF4Q9UHB7 1163 aaKnown RBP14.15□□□□□ -0.14
HMGCS1-205ENST00000508319 FBXO2Q9UK22 296 aaPredicted RBP14.15□□□□□ -0.14
HMGCS1-205ENST00000508319 CPSF3Q9UKF6 684 aaKnown RBP14.15□□□□□ -0.14
HMGCS1-205ENST00000508319 GTF3C5Q9Y5Q8 519 aaPredicted RBP14.15□□□□□ -0.14
HMGCS1-205ENST00000508319 CLIC4Q9Y696 253 aa14.15□□□□□ -0.14
HMGCS1-205ENST00000508319 SCN1AP35498 2009 aa14.15□□□□□ -0.14
HMGCS1-205ENST00000508319 FRYLO94915 3013 aa14.14□□□□□ -0.15
HMGCS1-205ENST00000508319 PATJQ8NI35 1801 aa14.14□□□□□ -0.15
HMGCS1-205ENST00000508319 TISP43B9A030 160 aa14.14□□□□□ -0.15
HMGCS1-205ENST00000508319 STK25O00506 426 aa14.14□□□□□ -0.15
HMGCS1-205ENST00000508319 PPEF2O14830 753 aa14.14□□□□□ -0.15
HMGCS1-205ENST00000508319 OAZ2O95190 189 aa14.14□□□□□ -0.15
HMGCS1-205ENST00000508319 DCNP07585 359 aaKnown RBP14.14□□□□□ -0.15
HMGCS1-205ENST00000508319 PTPN2P17706 415 aa14.14□□□□□ -0.15
HMGCS1-205ENST00000508319 MARCKSP29966 332 aaPredicted RBP14.14□□□□□ -0.15
HMGCS1-205ENST00000508319 CCR2P41597 374 aa14.14□□□□□ -0.15
HMGCS1-205ENST00000508319 STARD6P59095 220 aa14.14□□□□□ -0.15
HMGCS1-205ENST00000508319 YWHAHQ04917 246 aaPredicted RBP14.14□□□□□ -0.15
HMGCS1-205ENST00000508319 ADCY1Q08828 1119 aa14.14□□□□□ -0.15
HMGCS1-205ENST00000508319 ZC2HC1CQ53FD0 456 aaPredicted RBP14.14□□□□□ -0.15
HMGCS1-205ENST00000508319 FAM173BQ6P4H8 233 aa14.14□□□□□ -0.15
HMGCS1-205ENST00000508319 FRMD5Q7Z6J6 570 aa14.14□□□□□ -0.15
HMGCS1-205ENST00000508319 BEST2Q8NFU1 509 aa14.14□□□□□ -0.15
HMGCS1-205ENST00000508319 PJA1Q8NG27 643 aa14.14□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms