RNA–Protein interactions for RNA: ENST00000508235.1

RNF4-210, Transcript of ring finger protein 4, humanhuman

TSL 3

Gene RNF4, Length 603 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-210ENST00000508235 ITGA11Q9UKX5 1188 aa16.22■□□□□ 0.19
RNF4-210ENST00000508235 VWA8A3KMH1 1905 aa16.21■□□□□ 0.19
RNF4-210ENST00000508235 MYO7AQ13402 2215 aa16.21■□□□□ 0.19
RNF4-210ENST00000508235 ANO9A1A5B4 782 aa16.21■□□□□ 0.19
RNF4-210ENST00000508235 PIRO00625 290 aa16.21■□□□□ 0.19
RNF4-210ENST00000508235 C2CD2LO14523 706 aa16.21■□□□□ 0.19
RNF4-210ENST00000508235 LILRB3O75022 631 aa16.21■□□□□ 0.19
RNF4-210ENST00000508235 AP3M2P53677 418 aa16.21■□□□□ 0.19
RNF4-210ENST00000508235 WNT7BP56706 349 aa16.21■□□□□ 0.19
RNF4-210ENST00000508235 ADAM9Q13443 819 aa16.21■□□□□ 0.19
RNF4-210ENST00000508235 ADAM15Q13444 863 aa16.21■□□□□ 0.19
RNF4-210ENST00000508235 ISM2Q6H9L7 571 aa16.21■□□□□ 0.19
RNF4-210ENST00000508235 CD300LGQ6UXG3 332 aa16.21■□□□□ 0.19
RNF4-210ENST00000508235 ANKS3Q6ZW76 656 aa16.21■□□□□ 0.19
RNF4-210ENST00000508235 APPL2Q8NEU8 664 aa16.21■□□□□ 0.19
RNF4-210ENST00000508235 AUTS2Q8WXX7 1259 aa16.21■□□□□ 0.19
RNF4-210ENST00000508235 PIK3R5Q8WYR1 880 aa16.21■□□□□ 0.19
RNF4-210ENST00000508235 CCDC127Q96BQ5 260 aa16.21■□□□□ 0.19
RNF4-210ENST00000508235 SUSD3Q96L08 255 aa16.21■□□□□ 0.19
RNF4-210ENST00000508235 CGRRF1Q99675 332 aa16.21■□□□□ 0.19
RNF4-210ENST00000508235 INTS13Q9NVM9 706 aa16.21■□□□□ 0.19
RNF4-210ENST00000508235 CLDND1Q9NY35 253 aa16.21■□□□□ 0.19
RNF4-210ENST00000508235 FNIP2Q9P278 1114 aa16.21■□□□□ 0.19
RNF4-210ENST00000508235 THEGQ9P2T0 379 aa16.21■□□□□ 0.19
RNF4-210ENST00000508235 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP16.2■□□□□ 0.18
RNF4-210ENST00000508235 BICDL2A1A5D9 508 aa16.2■□□□□ 0.18
RNF4-210ENST00000508235 BIN1O00499 593 aa16.2■□□□□ 0.18
RNF4-210ENST00000508235 PER2O15055 1255 aa16.2■□□□□ 0.18
RNF4-210ENST00000508235 CETN3O15182 167 aa16.2■□□□□ 0.18
RNF4-210ENST00000508235 CLASP2O75122 1294 aaKnown RBP16.2■□□□□ 0.18
RNF4-210ENST00000508235 C1RP00736 705 aa16.2■□□□□ 0.18
RNF4-210ENST00000508235 CNPP09543 421 aaKnown RBP16.2■□□□□ 0.18
RNF4-210ENST00000508235 DLATP10515 647 aaKnown RBP16.2■□□□□ 0.18
RNF4-210ENST00000508235 TNNI1P19237 187 aa16.2■□□□□ 0.18
RNF4-210ENST00000508235 CCNE1P24864 410 aa16.2■□□□□ 0.18
RNF4-210ENST00000508235 KLRC2P26717 231 aa16.2■□□□□ 0.18
RNF4-210ENST00000508235 PSMC2P35998 433 aaKnown RBP16.2■□□□□ 0.18
RNF4-210ENST00000508235 BRCC3P46736 316 aa16.2■□□□□ 0.18
RNF4-210ENST00000508235 TAF6P49848 677 aa16.2■□□□□ 0.18
RNF4-210ENST00000508235 GUCY2FP51841 1108 aa16.2■□□□□ 0.18
RNF4-210ENST00000508235 RBP5P82980 135 aa16.2■□□□□ 0.18
RNF4-210ENST00000508235 FKBP3Q00688 224 aaKnown RBP16.2■□□□□ 0.18
RNF4-210ENST00000508235 CTC1Q2NKJ3 1217 aa16.2■□□□□ 0.18
RNF4-210ENST00000508235 SV2CQ496J9 727 aa16.2■□□□□ 0.18
RNF4-210ENST00000508235 ELMSAN1Q6PJG2 1045 aa16.2■□□□□ 0.18
RNF4-210ENST00000508235 DSTYKQ6XUX3 929 aa16.2■□□□□ 0.18
RNF4-210ENST00000508235 EP400NLQ6ZTU2 488 aa16.2■□□□□ 0.18
RNF4-210ENST00000508235 CASP10Q92851 521 aa16.2■□□□□ 0.18
RNF4-210ENST00000508235 KLHL5Q96PQ7 755 aa16.2■□□□□ 0.18
RNF4-210ENST00000508235 MKNK1Q9BUB5 465 aa16.2■□□□□ 0.18
RNF4-210ENST00000508235 MTMR12Q9C0I1 747 aa16.2■□□□□ 0.18
RNF4-210ENST00000508235 UBE2ZQ9H832 354 aaPredicted RBP16.2■□□□□ 0.18
RNF4-210ENST00000508235 RXFP1Q9HBX9 757 aa16.2■□□□□ 0.18
RNF4-210ENST00000508235 DPP7Q9UHL4 492 aa16.2■□□□□ 0.18
RNF4-210ENST00000508235 PCDHB8Q9UN66 801 aa16.2■□□□□ 0.18
RNF4-210ENST00000508235 TRANK1O15050 2925 aa16.2■□□□□ 0.18
RNF4-210ENST00000508235 H7C4K7 107 aa16.19■□□□□ 0.18
RNF4-210ENST00000508235 M0QZQ0 153 aa16.19■□□□□ 0.18
RNF4-210ENST00000508235 ITGB3P05106 788 aa16.19■□□□□ 0.18
RNF4-210ENST00000508235 KRT13P13646 458 aa16.19■□□□□ 0.18
RNF4-210ENST00000508235 TKTP29401 623 aaKnown RBP16.19■□□□□ 0.18
RNF4-210ENST00000508235 GTF2F1P35269 517 aaKnown RBP eCLIP16.19■□□□□ 0.18
RNF4-210ENST00000508235 AARSP49588 968 aaKnown RBP eCLIP16.19■□□□□ 0.18
RNF4-210ENST00000508235 NDUFV1P49821 464 aa16.19■□□□□ 0.18
RNF4-210ENST00000508235 LILRA4P59901 499 aa16.19■□□□□ 0.18
RNF4-210ENST00000508235 ENPEPQ07075 957 aa16.19■□□□□ 0.18
RNF4-210ENST00000508235 PSMD5Q16401 504 aa16.19■□□□□ 0.18
RNF4-210ENST00000508235 RTP2Q5QGT7 225 aa16.19■□□□□ 0.18
RNF4-210ENST00000508235 FOXR2Q6PJQ5 311 aa16.19■□□□□ 0.18
RNF4-210ENST00000508235 TMEM184AQ6ZMB5 413 aa16.19■□□□□ 0.18
RNF4-210ENST00000508235 INTS8Q75QN2 995 aaKnown RBP16.19■□□□□ 0.18
RNF4-210ENST00000508235 CSGALNACT2Q8N6G5 542 aa16.19■□□□□ 0.18
RNF4-210ENST00000508235 LRRC52Q8N7C0 313 aa16.19■□□□□ 0.18
RNF4-210ENST00000508235 C1orf127Q8N9H9 656 aa16.19■□□□□ 0.18
RNF4-210ENST00000508235 TMC2Q8TDI7 906 aa16.19■□□□□ 0.18
RNF4-210ENST00000508235 ATXN2LQ8WWM7 1075 aaKnown RBP16.19■□□□□ 0.18
RNF4-210ENST00000508235 B3GALT6Q96L58 329 aa16.19■□□□□ 0.18
RNF4-210ENST00000508235 OXCT2Q9BYC2 517 aaPredicted RBP16.19■□□□□ 0.18
RNF4-210ENST00000508235 SCN1AP35498 2009 aa16.19■□□□□ 0.18
RNF4-210ENST00000508235 I3L4J1 428 aa16.18■□□□□ 0.18
RNF4-210ENST00000508235 IKBKBO14920 756 aa16.18■□□□□ 0.18
RNF4-210ENST00000508235 TEX28O15482 410 aa16.18■□□□□ 0.18
RNF4-210ENST00000508235 KRT19P08727 400 aa16.18■□□□□ 0.18
RNF4-210ENST00000508235 EPB41P11171 864 aaKnown RBP16.18■□□□□ 0.18
RNF4-210ENST00000508235 PTMSP20962 102 aa16.18■□□□□ 0.18
RNF4-210ENST00000508235 BMP6P22004 513 aa16.18■□□□□ 0.18
RNF4-210ENST00000508235 POLR2BP30876 1174 aaKnown RBP16.18■□□□□ 0.18
RNF4-210ENST00000508235 CASP4P49662 377 aa16.18■□□□□ 0.18
RNF4-210ENST00000508235 MYO1EQ12965 1108 aa16.18■□□□□ 0.18
RNF4-210ENST00000508235 ANKRD40Q6AI12 368 aa16.18■□□□□ 0.18
RNF4-210ENST00000508235 PRSS55Q6UWB4 352 aaPredicted RBP16.18■□□□□ 0.18
RNF4-210ENST00000508235 FAM186BQ8IYM0 893 aa16.18■□□□□ 0.18
RNF4-210ENST00000508235 MLKLQ8NB16 471 aa16.18■□□□□ 0.18
RNF4-210ENST00000508235 LNX1Q8TBB1 728 aaPredicted RBP16.18■□□□□ 0.18
RNF4-210ENST00000508235 GPT2Q8TD30 523 aa16.18■□□□□ 0.18
RNF4-210ENST00000508235 PARD3BQ8TEW8 1205 aa16.18■□□□□ 0.18
RNF4-210ENST00000508235 DSEQ9UL01 958 aa16.18■□□□□ 0.18
RNF4-210ENST00000508235 AGAP1Q9UPQ3 857 aa16.18■□□□□ 0.18
RNF4-210ENST00000508235 BACE2Q9Y5Z0 518 aa16.18■□□□□ 0.18
RNF4-210ENST00000508235 HCFC2Q9Y5Z7 792 aa16.18■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms