RNA–Protein interactions for RNA: ENST00000507162.1

VCAN-207, Transcript of versican, humanhuman

TSL 3

Gene VCAN, Length 766 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-207ENST00000507162 NXF3Q9H4D5 531 aaKnown RBP8.03□□□□□ -1.12
VCAN-207ENST00000507162 RIC8AQ9NPQ8 531 aa8.03□□□□□ -1.12
VCAN-207ENST00000507162 TMEM74BQ9NUR3 256 aa8.03□□□□□ -1.12
VCAN-207ENST00000507162 EBF1Q9UH73 591 aa8.03□□□□□ -1.12
VCAN-207ENST00000507162 APOBEC2Q9Y235 224 aaKnown RBP8.03□□□□□ -1.12
VCAN-207ENST00000507162 PLXNB3Q9ULL4 1909 aa8.03□□□□□ -1.12
VCAN-207ENST00000507162 IGLV3-22A0A075B6J6 115 aa8.02□□□□□ -1.13
VCAN-207ENST00000507162 SMCO2A6NFE2 343 aa8.02□□□□□ -1.13
VCAN-207ENST00000507162 SEC24AO95486 1093 aa8.02□□□□□ -1.13
VCAN-207ENST00000507162 CD59P13987 128 aa8.02□□□□□ -1.13
VCAN-207ENST00000507162 IGFBP6P24592 240 aaPredicted RBP8.02□□□□□ -1.13
VCAN-207ENST00000507162 GALK1P51570 392 aa8.02□□□□□ -1.13
VCAN-207ENST00000507162 PDE1AP54750 535 aa8.02□□□□□ -1.13
VCAN-207ENST00000507162 FCHO2Q0JRZ9 810 aa8.02□□□□□ -1.13
VCAN-207ENST00000507162 XKR3Q5GH77 459 aa8.02□□□□□ -1.13
VCAN-207ENST00000507162 TMEM196Q5HYL7 178 aa8.02□□□□□ -1.13
VCAN-207ENST00000507162 ANKRD45Q5TZF3 282 aa8.02□□□□□ -1.13
VCAN-207ENST00000507162 NOTUMQ6P988 496 aa8.02□□□□□ -1.13
VCAN-207ENST00000507162 PDZRN4Q6ZMN7 1036 aaPredicted RBP8.02□□□□□ -1.13
VCAN-207ENST00000507162 LPCAT2Q7L5N7 544 aa8.02□□□□□ -1.13
VCAN-207ENST00000507162 RALYLQ86SE5 291 aaKnown RBP8.02□□□□□ -1.13
VCAN-207ENST00000507162 SLCO6A1Q86UG4 719 aa8.02□□□□□ -1.13
VCAN-207ENST00000507162 CDR2LQ86X02 465 aaPredicted RBP8.02□□□□□ -1.13
VCAN-207ENST00000507162 SYT12Q8IV01 421 aa8.02□□□□□ -1.13
VCAN-207ENST00000507162 TSTD1Q8NFU3 115 aa8.02□□□□□ -1.13
VCAN-207ENST00000507162 RLN3Q8WXF3 142 aa8.02□□□□□ -1.13
VCAN-207ENST00000507162 CEP89Q96ST8 783 aa8.02□□□□□ -1.13
VCAN-207ENST00000507162 PRORYQ9H606 182 aa8.02□□□□□ -1.13
VCAN-207ENST00000507162 POLMQ9NP87 494 aaPredicted RBP8.02□□□□□ -1.13
VCAN-207ENST00000507162 ASAH2Q9NR71 780 aa8.02□□□□□ -1.13
VCAN-207ENST00000507162 DIAPH3Q9NSV4 1193 aa8.02□□□□□ -1.13
VCAN-207ENST00000507162 MTRRQ9UBK8 725 aa8.02□□□□□ -1.13
VCAN-207ENST00000507162 INSL5Q9Y5Q6 135 aa8.02□□□□□ -1.13
VCAN-207ENST00000507162 EML5Q05BV3 1969 aa8.02□□□□□ -1.13
VCAN-207ENST00000507162 ATXN2Q99700 1313 aaKnown RBP8.02□□□□□ -1.13
VCAN-207ENST00000507162 WDR81Q562E7 1941 aa8.01□□□□□ -1.13
VCAN-207ENST00000507162 DOPEY1Q5JWR5 2465 aa8.01□□□□□ -1.13
VCAN-207ENST00000507162 A0A1W2PRU2 124 aa8.01□□□□□ -1.13
VCAN-207ENST00000507162 I3L4J1 428 aa8.01□□□□□ -1.13
VCAN-207ENST00000507162 INO80B-WBP1J3KQ70 363 aa8.01□□□□□ -1.13
VCAN-207ENST00000507162 DDAH1O94760 285 aa8.01□□□□□ -1.13
VCAN-207ENST00000507162 WISP1O95388 367 aa8.01□□□□□ -1.13
VCAN-207ENST00000507162 NPTXRO95502 500 aa8.01□□□□□ -1.13
VCAN-207ENST00000507162 NTRK1P04629 796 aa8.01□□□□□ -1.13
VCAN-207ENST00000507162 ATF2P15336 505 aa8.01□□□□□ -1.13
VCAN-207ENST00000507162 FGFR3P22607 806 aa8.01□□□□□ -1.13
VCAN-207ENST00000507162 U2AF2P26368 475 aaKnown RBP eCLIP8.01□□□□□ -1.13
VCAN-207ENST00000507162 TKTP29401 623 aaKnown RBP8.01□□□□□ -1.13
VCAN-207ENST00000507162 AXLP30530 894 aa8.01□□□□□ -1.13
VCAN-207ENST00000507162 PTGER3P43115 390 aa8.01□□□□□ -1.13
VCAN-207ENST00000507162 ROR1Q01973 937 aa8.01□□□□□ -1.13
VCAN-207ENST00000507162 LAMTOR4Q0VGL1 99 aa8.01□□□□□ -1.13
VCAN-207ENST00000507162 TWF1Q12792 350 aa8.01□□□□□ -1.13
VCAN-207ENST00000507162 NBR1Q14596 966 aa8.01□□□□□ -1.13
VCAN-207ENST00000507162 TAF1BQ53T94 588 aaPredicted RBP8.01□□□□□ -1.13
VCAN-207ENST00000507162 WWC2Q6AWC2 1192 aa8.01□□□□□ -1.13
VCAN-207ENST00000507162 ANO7Q6IWH7 933 aa8.01□□□□□ -1.13
VCAN-207ENST00000507162 LRRC69Q6ZNQ3 347 aa8.01□□□□□ -1.13
VCAN-207ENST00000507162 TOGARAM2Q6ZUX3 1019 aa8.01□□□□□ -1.13
VCAN-207ENST00000507162 ANKS3Q6ZW76 656 aa8.01□□□□□ -1.13
VCAN-207ENST00000507162 SYT13Q7L8C5 426 aa8.01□□□□□ -1.13
VCAN-207ENST00000507162 MIER3Q7Z3K6 550 aa8.01□□□□□ -1.13
VCAN-207ENST00000507162 MINDY1Q8N5J2 469 aa8.01□□□□□ -1.13
VCAN-207ENST00000507162 FAM181AQ8N9Y4 354 aa8.01□□□□□ -1.13
VCAN-207ENST00000507162 RNF149Q8NC42 400 aa8.01□□□□□ -1.13
VCAN-207ENST00000507162 SHKBP1Q8TBC3 707 aa8.01□□□□□ -1.13
VCAN-207ENST00000507162 IGDCC4Q8TDY8 1250 aa8.01□□□□□ -1.13
VCAN-207ENST00000507162 PSPC1Q8WXF1 523 aaKnown RBP8.01□□□□□ -1.13
VCAN-207ENST00000507162 FCRL3Q96P31 734 aaPredicted RBP8.01□□□□□ -1.13
VCAN-207ENST00000507162 JPH2Q9BR39 696 aaPredicted RBP8.01□□□□□ -1.13
VCAN-207ENST00000507162 FBRSL1Q9HCM7 1045 aaKnown RBP8.01□□□□□ -1.13
VCAN-207ENST00000507162 GKN1Q9NS71 199 aa8.01□□□□□ -1.13
VCAN-207ENST00000507162 THG1LQ9NWX6 298 aaKnown RBP8.01□□□□□ -1.13
VCAN-207ENST00000507162 CEP72Q9P209 647 aa8.01□□□□□ -1.13
VCAN-207ENST00000507162 DKK4Q9UBT3 224 aa8.01□□□□□ -1.13
VCAN-207ENST00000507162 SLC6A14Q9UN76 642 aa8.01□□□□□ -1.13
VCAN-207ENST00000507162 BACE2Q9Y5Z0 518 aa8.01□□□□□ -1.13
VCAN-207ENST00000507162 DOPEY2Q9Y3R5 2298 aa8.01□□□□□ -1.13
VCAN-207ENST00000507162 UBR5O95071 2799 aaPredicted RBP8.01□□□□□ -1.13
VCAN-207ENST00000507162 ATMQ13315 3056 aa8□□□□□ -1.13
VCAN-207ENST00000507162 TDRD15B5MCY1 1934 aaKnown RBP8□□□□□ -1.13
VCAN-207ENST00000507162 GOLGA8CPA6NN73 597 aa8□□□□□ -1.13
VCAN-207ENST00000507162 TRDMT1O14717 391 aaKnown RBP8□□□□□ -1.13
VCAN-207ENST00000507162 TNFRSF10BO14763 440 aa8□□□□□ -1.13
VCAN-207ENST00000507162 TSPAN1O60635 241 aa8□□□□□ -1.13
VCAN-207ENST00000507162 GAS7O60861 476 aa8□□□□□ -1.13
VCAN-207ENST00000507162 B3GAT3O94766 335 aa8□□□□□ -1.13
VCAN-207ENST00000507162 ABLIM3O94929 683 aa8□□□□□ -1.13
VCAN-207ENST00000507162 STBD1O95210 358 aa8□□□□□ -1.13
VCAN-207ENST00000507162 PRKCBP05771 671 aa8□□□□□ -1.13
VCAN-207ENST00000507162 THP07101 528 aa8□□□□□ -1.13
VCAN-207ENST00000507162 CYP3A4P08684 503 aa8□□□□□ -1.13
VCAN-207ENST00000507162 SFNP31947 248 aa8□□□□□ -1.13
VCAN-207ENST00000507162 EIF2S3P41091 472 aaKnown RBP8□□□□□ -1.13
VCAN-207ENST00000507162 NPEPPSP55786 919 aa8□□□□□ -1.13
VCAN-207ENST00000507162 SETQ01105 290 aaPredicted RBP8□□□□□ -1.13
VCAN-207ENST00000507162 AP3B2Q13367 1082 aa8□□□□□ -1.13
VCAN-207ENST00000507162 DUOXA1Q1HG43 343 aa8□□□□□ -1.13
VCAN-207ENST00000507162 STXBP5Q5T5C0 1151 aa8□□□□□ -1.13
VCAN-207ENST00000507162 PLA2G4FQ68DD2 849 aa8□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms