RNA–Protein interactions for RNA: ENST00000504781.5

DDX41-203, Transcript of DEAD-box helicase 41, humanhuman

TSL 3

Gene DDX41, Length 618 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-203ENST00000504781 DPP3Q9NY33 737 aa10.9□□□□□ -0.66
DDX41-203ENST00000504781 SNTG2Q9NY99 539 aa10.9□□□□□ -0.66
DDX41-203ENST00000504781 PRKAG2Q9UGJ0 569 aa10.9□□□□□ -0.66
DDX41-203ENST00000504781 ADAMTS1Q9UHI8 967 aa10.9□□□□□ -0.66
DDX41-203ENST00000504781 ITGA11Q9UKX5 1188 aa10.9□□□□□ -0.66
DDX41-203ENST00000504781 PIN4Q9Y237 131 aaKnown RBP10.9□□□□□ -0.66
DDX41-203ENST00000504781 ATP11BQ9Y2G3 1177 aa10.9□□□□□ -0.66
DDX41-203ENST00000504781 ATP8B3O60423 1300 aa10.89□□□□□ -0.67
DDX41-203ENST00000504781 PTPRJQ12913 1337 aa10.89□□□□□ -0.67
DDX41-203ENST00000504781 PJA2O43164 708 aa10.89□□□□□ -0.67
DDX41-203ENST00000504781 PARNO95453 639 aaKnown RBP10.89□□□□□ -0.67
DDX41-203ENST00000504781 PLEKP08567 350 aaPredicted RBP10.89□□□□□ -0.67
DDX41-203ENST00000504781 FAM163BP0C2L3 166 aa10.89□□□□□ -0.67
DDX41-203ENST00000504781 CKBP12277 381 aa10.89□□□□□ -0.67
DDX41-203ENST00000504781 GZMAP12544 262 aa10.89□□□□□ -0.67
DDX41-203ENST00000504781 P4HA1P13674 534 aa10.89□□□□□ -0.67
DDX41-203ENST00000504781 CYP3A5P20815 502 aa10.89□□□□□ -0.67
DDX41-203ENST00000504781 VAV2P52735 878 aa10.89□□□□□ -0.67
DDX41-203ENST00000504781 MYL6P60660 151 aa10.89□□□□□ -0.67
DDX41-203ENST00000504781 KIF5AQ12840 1032 aa10.89□□□□□ -0.67
DDX41-203ENST00000504781 NFX1Q12986 1120 aaKnown RBP10.89□□□□□ -0.67
DDX41-203ENST00000504781 BFSP2Q13515 415 aa10.89□□□□□ -0.67
DDX41-203ENST00000504781 ARHGAP29Q52LW3 1261 aa10.89□□□□□ -0.67
DDX41-203ENST00000504781 LMBRD2Q68DH5 695 aaPredicted RBP10.89□□□□□ -0.67
DDX41-203ENST00000504781 TWF2Q6IBS0 349 aaKnown RBP10.89□□□□□ -0.67
DDX41-203ENST00000504781 KIAA1328Q86T90 577 aa10.89□□□□□ -0.67
DDX41-203ENST00000504781 ZNF677Q86XU0 584 aa10.89□□□□□ -0.67
DDX41-203ENST00000504781 EFCAB13Q8IY85 973 aa10.89□□□□□ -0.67
DDX41-203ENST00000504781 RNF10Q8N5U6 811 aaKnown RBP10.89□□□□□ -0.67
DDX41-203ENST00000504781 BEST2Q8NFU1 509 aa10.89□□□□□ -0.67
DDX41-203ENST00000504781 KIF18AQ8NI77 898 aa10.89□□□□□ -0.67
DDX41-203ENST00000504781 UBE2Q2Q8WVN8 375 aa10.89□□□□□ -0.67
DDX41-203ENST00000504781 WNT8BQ93098 351 aa10.89□□□□□ -0.67
DDX41-203ENST00000504781 AGPAT1Q99943 283 aa10.89□□□□□ -0.67
DDX41-203ENST00000504781 PI4K2AQ9BTU6 479 aa10.89□□□□□ -0.67
DDX41-203ENST00000504781 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP10.89□□□□□ -0.67
DDX41-203ENST00000504781 EIF2AQ9BY44 585 aaKnown RBP10.89□□□□□ -0.67
DDX41-203ENST00000504781 MTMR12Q9C0I1 747 aa10.89□□□□□ -0.67
DDX41-203ENST00000504781 CYP3A43Q9HB55 503 aa10.89□□□□□ -0.67
DDX41-203ENST00000504781 UBN1Q9NPG3 1134 aa10.89□□□□□ -0.67
DDX41-203ENST00000504781 TRMT13Q9NUP7 481 aaKnown RBP10.89□□□□□ -0.67
DDX41-203ENST00000504781 CNTN3Q9P232 1028 aa10.89□□□□□ -0.67
DDX41-203ENST00000504781 AJAP1Q9UKB5 411 aaPredicted RBP10.89□□□□□ -0.67
DDX41-203ENST00000504781 PADI3Q9ULW8 664 aa10.89□□□□□ -0.67
DDX41-203ENST00000504781 REXO2Q9Y3B8 237 aaKnown RBP10.89□□□□□ -0.67
DDX41-203ENST00000504781 PCDHB2Q9Y5E7 798 aa10.89□□□□□ -0.67
DDX41-203ENST00000504781 RANBP2P49792 3224 aaKnown RBP10.88□□□□□ -0.67
DDX41-203ENST00000504781 A0A087X0T9 212 aa10.88□□□□□ -0.67
DDX41-203ENST00000504781 A0A0U1RQF3 1178 aa10.88□□□□□ -0.67
DDX41-203ENST00000504781 BTNL10A8MVZ5 291 aa10.88□□□□□ -0.67
DDX41-203ENST00000504781 CITO14578 2027 aa10.88□□□□□ -0.67
DDX41-203ENST00000504781 ZNF263O14978 683 aa10.88□□□□□ -0.67
DDX41-203ENST00000504781 TLR3O15455 904 aaKnown RBP10.88□□□□□ -0.67
DDX41-203ENST00000504781 MEFVO15553 781 aaPredicted RBP10.88□□□□□ -0.67
DDX41-203ENST00000504781 KIF5CO60282 957 aa10.88□□□□□ -0.67
DDX41-203ENST00000504781 FAM228BP0C875 321 aa10.88□□□□□ -0.67
DDX41-203ENST00000504781 ANK1P16157 1881 aa10.88□□□□□ -0.67
DDX41-203ENST00000504781 RAB27AP51159 221 aa10.88□□□□□ -0.67
DDX41-203ENST00000504781 NOP14P78316 857 aaKnown RBP10.88□□□□□ -0.67
DDX41-203ENST00000504781 CYP27A1Q02318 531 aa10.88□□□□□ -0.67
DDX41-203ENST00000504781 CUL2Q13617 745 aa10.88□□□□□ -0.67
DDX41-203ENST00000504781 DSC3Q14574 896 aa10.88□□□□□ -0.67
DDX41-203ENST00000504781 ZNF618Q5T7W0 954 aa10.88□□□□□ -0.67
DDX41-203ENST00000504781 C1orf53Q5VUE5 145 aa10.88□□□□□ -0.67
DDX41-203ENST00000504781 ALKBH5Q6P6C2 394 aaKnown RBP10.88□□□□□ -0.67
DDX41-203ENST00000504781 PDZRN4Q6ZMN7 1036 aaPredicted RBP10.88□□□□□ -0.67
DDX41-203ENST00000504781 TDHQ8IZJ6 230 aa10.88□□□□□ -0.67
DDX41-203ENST00000504781 C1orf127Q8N9H9 656 aa10.88□□□□□ -0.67
DDX41-203ENST00000504781 ACRBPQ8NEB7 543 aa10.88□□□□□ -0.67
DDX41-203ENST00000504781 CXorf38Q8TB03 319 aa10.88□□□□□ -0.67
DDX41-203ENST00000504781 PGBD4Q96DM1 585 aa10.88□□□□□ -0.67
DDX41-203ENST00000504781 KIF12Q96FN5 646 aa10.88□□□□□ -0.67
DDX41-203ENST00000504781 CALR3Q96L12 384 aaKnown RBP10.88□□□□□ -0.67
DDX41-203ENST00000504781 SNX27Q96L92 541 aa10.88□□□□□ -0.67
DDX41-203ENST00000504781 TOX2Q96NM4 488 aa10.88□□□□□ -0.67
DDX41-203ENST00000504781 DESI2Q9BSY9 194 aa10.88□□□□□ -0.67
DDX41-203ENST00000504781 SYT11Q9BT88 431 aa10.88□□□□□ -0.67
DDX41-203ENST00000504781 IFIH1Q9BYX4 1025 aaKnown RBP10.88□□□□□ -0.67
DDX41-203ENST00000504781 XYLT2Q9H1B5 865 aa10.88□□□□□ -0.67
DDX41-203ENST00000504781 TRPV6Q9H1D0 765 aa10.88□□□□□ -0.67
DDX41-203ENST00000504781 APOBEC3GQ9HC16 384 aaKnown RBP10.88□□□□□ -0.67
DDX41-203ENST00000504781 PRDM5Q9NQX1 630 aaPredicted RBP10.88□□□□□ -0.67
DDX41-203ENST00000504781 FAM105AQ9NUU6 356 aa10.88□□□□□ -0.67
DDX41-203ENST00000504781 NAGPAQ9UK23 515 aa10.88□□□□□ -0.67
DDX41-203ENST00000504781 UBQLN1Q9UMX0 589 aaKnown RBP10.88□□□□□ -0.67
DDX41-203ENST00000504781 GIT1Q9Y2X7 761 aa10.88□□□□□ -0.67
DDX41-203ENST00000504781 IPPQ9Y573 584 aa10.88□□□□□ -0.67
DDX41-203ENST00000504781 NUB1Q9Y5A7 615 aa10.88□□□□□ -0.67
DDX41-203ENST00000504781 SZT2Q5T011 3432 aa10.88□□□□□ -0.67
DDX41-203ENST00000504781 SMIM28A0A1B0GU29 152 aa10.87□□□□□ -0.67
DDX41-203ENST00000504781 CYP26A1O43174 497 aa10.87□□□□□ -0.67
DDX41-203ENST00000504781 EOMESO95936 686 aa10.87□□□□□ -0.67
DDX41-203ENST00000504781 NFICP08651 508 aa10.87□□□□□ -0.67
DDX41-203ENST00000504781 ITGA4P13612 1032 aa10.87□□□□□ -0.67
DDX41-203ENST00000504781 ACO1P21399 889 aaKnown RBP10.87□□□□□ -0.67
DDX41-203ENST00000504781 PAX3P23760 479 aa10.87□□□□□ -0.67
DDX41-203ENST00000504781 USP8P40818 1118 aa10.87□□□□□ -0.67
DDX41-203ENST00000504781 FAM189BP81408 668 aa10.87□□□□□ -0.67
DDX41-203ENST00000504781 GFPT1Q06210 699 aaPredicted RBP10.87□□□□□ -0.67
DDX41-203ENST00000504781 MYO1EQ12965 1108 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms