RNA–Protein interactions for RNA: ENST00000504016.1

SUB1-204, Transcript of SUB1 homolog, transcriptional regulator, humanhuman

TSL 3

Gene SUB1, Length 509 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUB1-204ENST00000504016 MOCS1Q9NZB8 636 aa5.38□□□□□ -1.55
SUB1-204ENST00000504016 G3BP2Q9UN86 482 aaKnown RBP5.38□□□□□ -1.55
SUB1-204ENST00000504016 LIMCH1Q9UPQ0 1083 aa5.38□□□□□ -1.55
SUB1-204ENST00000504016 RUVBL1Q9Y265 456 aaKnown RBP5.38□□□□□ -1.55
SUB1-204ENST00000504016 ATRNL1Q5VV63 1379 aa5.38□□□□□ -1.55
SUB1-204ENST00000504016 CCDC154A6NI56 674 aa5.37□□□□□ -1.55
SUB1-204ENST00000504016 IL33O95760 270 aa5.37□□□□□ -1.55
SUB1-204ENST00000504016 IL2RBP14784 551 aa5.37□□□□□ -1.55
SUB1-204ENST00000504016 ATP5JP18859 108 aa5.37□□□□□ -1.55
SUB1-204ENST00000504016 FPR1P21462 350 aa5.37□□□□□ -1.55
SUB1-204ENST00000504016 SREBF1P36956 1147 aa5.37□□□□□ -1.55
SUB1-204ENST00000504016 CXADRP78310 365 aa5.37□□□□□ -1.55
SUB1-204ENST00000504016 OCA2Q04671 838 aa5.37□□□□□ -1.55
SUB1-204ENST00000504016 ZNF169Q14929 603 aaPredicted RBP5.37□□□□□ -1.55
SUB1-204ENST00000504016 PLEKHG6Q3KR16 790 aa5.37□□□□□ -1.55
SUB1-204ENST00000504016 C3orf36Q3SXR2 165 aa5.37□□□□□ -1.55
SUB1-204ENST00000504016 GJC2Q5T442 439 aaPredicted RBP5.37□□□□□ -1.55
SUB1-204ENST00000504016 SP5Q6BEB4 398 aaPredicted RBP5.37□□□□□ -1.55
SUB1-204ENST00000504016 ANKRD13AQ8IZ07 590 aa5.37□□□□□ -1.55
SUB1-204ENST00000504016 FAM43AQ8N2R8 423 aa5.37□□□□□ -1.55
SUB1-204ENST00000504016 BOD1Q96IK1 185 aa5.37□□□□□ -1.55
SUB1-204ENST00000504016 C7orf25Q9BPX7 421 aa5.37□□□□□ -1.55
SUB1-204ENST00000504016 GALNT9Q9HCQ5 603 aa5.37□□□□□ -1.55
SUB1-204ENST00000504016 AJAP1Q9UKB5 411 aaPredicted RBP5.37□□□□□ -1.55
SUB1-204ENST00000504016 SIK3Q9Y2K2 1263 aa5.37□□□□□ -1.55
SUB1-204ENST00000504016 GPANK1O95872 356 aa5.36□□□□□ -1.55
SUB1-204ENST00000504016 IGLV2-14P01704 120 aa5.36□□□□□ -1.55
SUB1-204ENST00000504016 FGFR4P22455 802 aa5.36□□□□□ -1.55
SUB1-204ENST00000504016 RECQLP46063 649 aaPredicted RBP5.36□□□□□ -1.55
SUB1-204ENST00000504016 SLC6A9P48067 706 aa5.36□□□□□ -1.55
SUB1-204ENST00000504016 RAB27AP51159 221 aa5.36□□□□□ -1.55
SUB1-204ENST00000504016 SLC16A1P53985 500 aa5.36□□□□□ -1.55
SUB1-204ENST00000504016 SIM1P81133 766 aaPredicted RBP5.36□□□□□ -1.55
SUB1-204ENST00000504016 UBXN2BQ14CS0 331 aa5.36□□□□□ -1.55
SUB1-204ENST00000504016 ZNF362Q5T0B9 420 aaPredicted RBP5.36□□□□□ -1.55
SUB1-204ENST00000504016 FOXR2Q6PJQ5 311 aa5.36□□□□□ -1.55
SUB1-204ENST00000504016 COA7Q96BR5 231 aa5.36□□□□□ -1.55
SUB1-204ENST00000504016 CHMP4CQ96CF2 233 aa5.36□□□□□ -1.55
SUB1-204ENST00000504016 NAF1Q96HR8 494 aaKnown RBP5.36□□□□□ -1.55
SUB1-204ENST00000504016 ALG13Q9NP73 1137 aaKnown RBP5.36□□□□□ -1.55
SUB1-204ENST00000504016 TMEM74BQ9NUR3 256 aa5.36□□□□□ -1.55
SUB1-204ENST00000504016 LRIT1Q9P2V4 623 aa5.36□□□□□ -1.55
SUB1-204ENST00000504016 SPEF1Q9Y4P9 236 aa5.36□□□□□ -1.55
SUB1-204ENST00000504016 ACTL7AQ9Y615 435 aa5.36□□□□□ -1.55
SUB1-204ENST00000504016 AATKQ6ZMQ8 1374 aa5.35□□□□□ -1.55
SUB1-204ENST00000504016 HTRA2O43464 458 aaPredicted RBP5.35□□□□□ -1.55
SUB1-204ENST00000504016 ZRANB2O95218 330 aaKnown RBP eCLIP5.35□□□□□ -1.55
SUB1-204ENST00000504016 CT47B1P0C2W7 299 aaPredicted RBP5.35□□□□□ -1.55
SUB1-204ENST00000504016 EDNRBP24530 442 aa5.35□□□□□ -1.55
SUB1-204ENST00000504016 RARRES1P49788 294 aa5.35□□□□□ -1.55
SUB1-204ENST00000504016 HSD11B2P80365 405 aa5.35□□□□□ -1.55
SUB1-204ENST00000504016 ODR4Q5SWX8 454 aa5.35□□□□□ -1.55
SUB1-204ENST00000504016 ARHGEF25Q86VW2 580 aa5.35□□□□□ -1.55
SUB1-204ENST00000504016 MIER2Q8N344 545 aa5.35□□□□□ -1.55
SUB1-204ENST00000504016 ZGPATQ8N5A5 531 aaKnown RBP5.35□□□□□ -1.55
SUB1-204ENST00000504016 DDX55Q8NHQ9 600 aaKnown RBP eCLIP5.35□□□□□ -1.55
SUB1-204ENST00000504016 ZNF384Q8TF68 577 aa5.35□□□□□ -1.55
SUB1-204ENST00000504016 HOXB13Q92826 284 aaPredicted RBP5.35□□□□□ -1.55
SUB1-204ENST00000504016 MYOCQ99972 504 aa5.35□□□□□ -1.55
SUB1-204ENST00000504016 SLC13A1Q9BZW2 595 aa5.35□□□□□ -1.55
SUB1-204ENST00000504016 LANCL2Q9NS86 450 aa5.35□□□□□ -1.55
SUB1-204ENST00000504016 TYW1Q9NV66 732 aaKnown RBP5.35□□□□□ -1.55
SUB1-204ENST00000504016 SAP30BPQ9UHR5 308 aaKnown RBP5.35□□□□□ -1.55
SUB1-204ENST00000504016 MTO1Q9Y2Z2 717 aaKnown RBP5.35□□□□□ -1.55
SUB1-204ENST00000504016 MYBBP1AQ9BQG0 1328 aaKnown RBP5.34□□□□□ -1.55
SUB1-204ENST00000504016 S100BP04271 92 aaPredicted RBP5.34□□□□□ -1.55
SUB1-204ENST00000504016 AMY1AP04745 511 aa5.34□□□□□ -1.55
SUB1-204ENST00000504016 PF4V1P10720 104 aa5.34□□□□□ -1.55
SUB1-204ENST00000504016 GCSHP23434 173 aa5.34□□□□□ -1.55
SUB1-204ENST00000504016 SLC6A2P23975 617 aa5.34□□□□□ -1.55
SUB1-204ENST00000504016 PCSK1P29120 753 aa5.34□□□□□ -1.55
SUB1-204ENST00000504016 ALDH1A3P47895 512 aa5.34□□□□□ -1.55
SUB1-204ENST00000504016 FXR1P51114 621 aaKnown RBP eCLIP5.34□□□□□ -1.55
SUB1-204ENST00000504016 MRPS35P82673 323 aaKnown RBP5.34□□□□□ -1.55
SUB1-204ENST00000504016 MCL1Q07820 350 aa5.34□□□□□ -1.55
SUB1-204ENST00000504016 MGAT2Q10469 447 aa5.34□□□□□ -1.55
SUB1-204ENST00000504016 ZNF529Q6P280 563 aa5.34□□□□□ -1.55
SUB1-204ENST00000504016 CATIPQ7Z7H3 387 aa5.34□□□□□ -1.55
SUB1-204ENST00000504016 RSPH3Q86UC2 560 aa5.34□□□□□ -1.55
SUB1-204ENST00000504016 CPA6Q8N4T0 437 aa5.34□□□□□ -1.55
SUB1-204ENST00000504016 FUBP1Q96AE4 644 aaKnown RBP5.34□□□□□ -1.55
SUB1-204ENST00000504016 HSPBAP1Q96EW2 488 aa5.34□□□□□ -1.55
SUB1-204ENST00000504016 PTCD3Q96EY7 689 aaKnown RBP5.34□□□□□ -1.55
SUB1-204ENST00000504016 TMX3Q96JJ7 454 aa5.34□□□□□ -1.55
SUB1-204ENST00000504016 LRGUKQ96M69 825 aa5.34□□□□□ -1.55
SUB1-204ENST00000504016 AIFM2Q9BRQ8 373 aa5.34□□□□□ -1.55
SUB1-204ENST00000504016 WDR26Q9H7D7 661 aa5.34□□□□□ -1.55
SUB1-204ENST00000504016 USP25Q9UHP3 1055 aa5.34□□□□□ -1.55
SUB1-204ENST00000504016 KCNE5Q9UJ90 142 aa5.34□□□□□ -1.55
SUB1-204ENST00000504016 NOB1Q9ULX3 412 aaKnown RBP5.34□□□□□ -1.55
SUB1-204ENST00000504016 DMTF1Q9Y222 760 aa5.34□□□□□ -1.55
SUB1-204ENST00000504016 THRAP3Q9Y2W1 955 aaKnown RBP5.34□□□□□ -1.55
SUB1-204ENST00000504016 FAM171A2A8MVW0 826 aa5.33□□□□□ -1.56
SUB1-204ENST00000504016 ERN1O75460 977 aaKnown RBP5.33□□□□□ -1.56
SUB1-204ENST00000504016 ENDOD1O94919 500 aa5.33□□□□□ -1.56
SUB1-204ENST00000504016 PRSS23O95084 383 aa5.33□□□□□ -1.56
SUB1-204ENST00000504016 LRRC41Q15345 812 aa5.33□□□□□ -1.56
SUB1-204ENST00000504016 OTUD7BQ6GQQ9 843 aa5.33□□□□□ -1.56
SUB1-204ENST00000504016 MIGA2Q7L4E1 593 aa5.33□□□□□ -1.56
SUB1-204ENST00000504016 UBE3BQ7Z3V4 1068 aa5.33□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms