RNA–Protein interactions for RNA: ENST00000503291.5

CDC42SE2-206, Transcript of CDC42 small effector 2, humanhuman

TSL 1 (best) BASIC

Gene CDC42SE2, Length 2,025 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-206ENST00000503291 ATP2A2P16615 1042 aaKnown RBP21.96■■□□□ 1.11
CDC42SE2-206ENST00000503291 CLCNKBP51801 687 aa21.96■■□□□ 1.11
CDC42SE2-206ENST00000503291 APBA1Q02410 837 aa21.96■■□□□ 1.11
CDC42SE2-206ENST00000503291 LRMPQ12912 555 aa21.96■■□□□ 1.11
CDC42SE2-206ENST00000503291 VSTM4Q8IW00 320 aa21.96■■□□□ 1.11
CDC42SE2-206ENST00000503291 COLGALT2Q8IYK4 626 aa21.96■■□□□ 1.11
CDC42SE2-206ENST00000503291 RABGGTAQ92696 567 aa21.96■■□□□ 1.11
CDC42SE2-206ENST00000503291 YME1L1Q96TA2 773 aa21.96■■□□□ 1.11
CDC42SE2-206ENST00000503291 LSM14BQ9BX40 385 aaKnown RBP21.96■■□□□ 1.11
CDC42SE2-206ENST00000503291 XYLT2Q9H1B5 865 aa21.96■■□□□ 1.11
CDC42SE2-206ENST00000503291 RC3H2Q9HBD1 1191 aaKnown RBP21.96■■□□□ 1.11
CDC42SE2-206ENST00000503291 FAM207AQ9NSI2 230 aaPredicted RBP21.96■■□□□ 1.11
CDC42SE2-206ENST00000503291 ASS1P00966 412 aaKnown RBP21.96■■□□□ 1.11
CDC42SE2-206ENST00000503291 RPL9P32969 192 aaKnown RBP21.96■■□□□ 1.11
CDC42SE2-206ENST00000503291 UPP1Q16831 310 aa21.96■■□□□ 1.11
CDC42SE2-206ENST00000503291 DPY19L2P1Q6NXN4 242 aa21.96■■□□□ 1.11
CDC42SE2-206ENST00000503291 LRRC43Q8N309 656 aa21.96■■□□□ 1.11
CDC42SE2-206ENST00000503291 HPDLQ96IR7 371 aa21.96■■□□□ 1.11
CDC42SE2-206ENST00000503291 ZBED2Q9BTP6 218 aa21.96■■□□□ 1.11
CDC42SE2-206ENST00000503291 UBE2OQ9C0C9 1292 aaKnown RBP21.96■■□□□ 1.11
CDC42SE2-206ENST00000503291 NRDE2Q9H7Z3 1164 aa21.96■■□□□ 1.11
CDC42SE2-206ENST00000503291 HCSTQ9UBK5 93 aa21.96■■□□□ 1.11
CDC42SE2-206ENST00000503291 DNAJB4Q9UDY4 337 aa21.96■■□□□ 1.11
CDC42SE2-206ENST00000503291 WDR44Q5JSH3 913 aa21.95■■□□□ 1.1
CDC42SE2-206ENST00000503291 SPECC1LQ69YQ0 1117 aa21.95■■□□□ 1.1
CDC42SE2-206ENST00000503291 SPOPLQ6IQ16 392 aa21.95■■□□□ 1.1
CDC42SE2-206ENST00000503291 HERC6Q8IVU3 1022 aa21.95■■□□□ 1.1
CDC42SE2-206ENST00000503291 CCDC150Q8NCX0 1101 aa21.95■■□□□ 1.1
CDC42SE2-206ENST00000503291 DDX27Q96GQ7 796 aaKnown RBP21.95■■□□□ 1.1
CDC42SE2-206ENST00000503291 IMPG2Q9BZV3 1241 aa21.95■■□□□ 1.1
CDC42SE2-206ENST00000503291 SIX2Q9NPC8 291 aa21.95■■□□□ 1.1
CDC42SE2-206ENST00000503291 COL4A6Q14031 1691 aa21.95■■□□□ 1.1
CDC42SE2-206ENST00000503291 ATICP31939 592 aa21.94■■□□□ 1.1
CDC42SE2-206ENST00000503291 LRRC52Q8N7C0 313 aa21.94■■□□□ 1.1
CDC42SE2-206ENST00000503291 ANP32BQ92688 251 aaKnown RBP21.94■■□□□ 1.1
CDC42SE2-206ENST00000503291 RNPC3Q96LT9 517 aaKnown RBP21.94■■□□□ 1.1
CDC42SE2-206ENST00000503291 UROC1Q96N76 676 aa21.94■■□□□ 1.1
CDC42SE2-206ENST00000503291 PLCB1Q9NQ66 1216 aa21.94■■□□□ 1.1
CDC42SE2-206ENST00000503291 PODXLO00592 558 aa21.94■■□□□ 1.1
CDC42SE2-206ENST00000503291 ZC3H11AO75152 810 aaKnown RBP eCLIP21.94■■□□□ 1.1
CDC42SE2-206ENST00000503291 CLSTN1O94985 981 aa21.94■■□□□ 1.1
CDC42SE2-206ENST00000503291 IGFBP6P24592 240 aaPredicted RBP21.94■■□□□ 1.1
CDC42SE2-206ENST00000503291 HTRA4P83105 476 aaPredicted RBP21.94■■□□□ 1.1
CDC42SE2-206ENST00000503291 BTG3Q14201 252 aaPredicted RBP21.94■■□□□ 1.1
CDC42SE2-206ENST00000503291 ZNF699Q32M78 642 aa21.94■■□□□ 1.1
CDC42SE2-206ENST00000503291 PHLDB3Q6NSJ2 640 aa21.94■■□□□ 1.1
CDC42SE2-206ENST00000503291 CMTR2Q8IYT2 770 aaKnown RBP21.94■■□□□ 1.1
CDC42SE2-206ENST00000503291 TAF4BQ92750 862 aa21.94■■□□□ 1.1
CDC42SE2-206ENST00000503291 TATDN2Q93075 761 aa21.94■■□□□ 1.1
CDC42SE2-206ENST00000503291 APOBEC3GQ9HC16 384 aaKnown RBP21.94■■□□□ 1.1
CDC42SE2-206ENST00000503291 INSL6Q9Y581 213 aa21.94■■□□□ 1.1
CDC42SE2-206ENST00000503291 NUB1Q9Y5A7 615 aa21.94■■□□□ 1.1
CDC42SE2-206ENST00000503291 ITIH6Q6UXX5 1313 aa21.93■■□□□ 1.1
CDC42SE2-206ENST00000503291 SCN1AP35498 2009 aa21.93■■□□□ 1.1
CDC42SE2-206ENST00000503291 EPHB6O15197 1021 aa21.93■■□□□ 1.1
CDC42SE2-206ENST00000503291 NOL4O94818 638 aa21.93■■□□□ 1.1
CDC42SE2-206ENST00000503291 OR1G1P47890 313 aa21.93■■□□□ 1.1
CDC42SE2-206ENST00000503291 NOP14P78316 857 aaKnown RBP21.93■■□□□ 1.1
CDC42SE2-206ENST00000503291 MYO1EQ12965 1108 aa21.93■■□□□ 1.1
CDC42SE2-206ENST00000503291 WDR72Q3MJ13 1102 aa21.93■■□□□ 1.1
CDC42SE2-206ENST00000503291 KLHDC7AQ5VTJ3 777 aa21.93■■□□□ 1.1
CDC42SE2-206ENST00000503291 NEK11Q8NG66 645 aa21.93■■□□□ 1.1
CDC42SE2-206ENST00000503291 NT5C1BQ96P26 610 aa21.93■■□□□ 1.1
CDC42SE2-206ENST00000503291 APEX2Q9UBZ4 518 aa21.93■■□□□ 1.1
CDC42SE2-206ENST00000503291 B3GAT3O94766 335 aa21.92■■□□□ 1.1
CDC42SE2-206ENST00000503291 STAU1O95793 577 aaKnown RBP21.92■■□□□ 1.1
CDC42SE2-206ENST00000503291 ALDH2P05091 517 aa21.92■■□□□ 1.1
CDC42SE2-206ENST00000503291 TRIM21P19474 475 aaKnown RBP21.92■■□□□ 1.1
CDC42SE2-206ENST00000503291 CDC25BP30305 580 aa21.92■■□□□ 1.1
CDC42SE2-206ENST00000503291 PNPLA4P41247 253 aa21.92■■□□□ 1.1
CDC42SE2-206ENST00000503291 LILRA4P59901 499 aa21.92■■□□□ 1.1
CDC42SE2-206ENST00000503291 GJB7Q6PEY0 223 aa21.92■■□□□ 1.1
CDC42SE2-206ENST00000503291 TMC6Q7Z403 805 aa21.92■■□□□ 1.1
CDC42SE2-206ENST00000503291 DRC7Q8IY82 874 aa21.92■■□□□ 1.1
CDC42SE2-206ENST00000503291 CWH43Q9H720 699 aa21.92■■□□□ 1.1
CDC42SE2-206ENST00000503291 VRTNQ9H8Y1 702 aa21.92■■□□□ 1.1
CDC42SE2-206ENST00000503291 RANBP2P49792 3224 aaKnown RBP21.92■■□□□ 1.1
CDC42SE2-206ENST00000503291 UCHL3P15374 230 aa21.92■■□□□ 1.1
CDC42SE2-206ENST00000503291 TAF6P49848 677 aa21.92■■□□□ 1.1
CDC42SE2-206ENST00000503291 DCLRE1AQ6PJP8 1040 aa21.92■■□□□ 1.1
CDC42SE2-206ENST00000503291 RRAGAQ7L523 313 aa21.92■■□□□ 1.1
CDC42SE2-206ENST00000503291 ARHGAP30Q7Z6I6 1101 aaPredicted RBP21.92■■□□□ 1.1
CDC42SE2-206ENST00000503291 ARHGEF19Q8IW93 802 aa21.92■■□□□ 1.1
CDC42SE2-206ENST00000503291 C3orf58Q8NDZ4 430 aa21.92■■□□□ 1.1
CDC42SE2-206ENST00000503291 ZNF560Q96MR9 790 aa21.92■■□□□ 1.1
CDC42SE2-206ENST00000503291 RAD9AQ99638 391 aa21.92■■□□□ 1.1
CDC42SE2-206ENST00000503291 UBE2TQ9NPD8 197 aaPredicted RBP21.92■■□□□ 1.1
CDC42SE2-206ENST00000503291 NXF1Q9UBU9 619 aaKnown RBP21.92■■□□□ 1.1
CDC42SE2-206ENST00000503291 SPTLC1O15269 473 aa21.91■■□□□ 1.1
CDC42SE2-206ENST00000503291 ZNF667Q5HYK9 610 aa21.91■■□□□ 1.1
CDC42SE2-206ENST00000503291 PPM1KQ8N3J5 372 aa21.91■■□□□ 1.1
CDC42SE2-206ENST00000503291 TMEM175Q9BSA9 504 aa21.91■■□□□ 1.1
CDC42SE2-206ENST00000503291 NUP58Q9BVL2 599 aa21.91■■□□□ 1.1
CDC42SE2-206ENST00000503291 GANQ9H2C0 597 aa21.91■■□□□ 1.1
CDC42SE2-206ENST00000503291 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP21.91■■□□□ 1.1
CDC42SE2-206ENST00000503291 KPNA7A9QM74 516 aa21.9■■□□□ 1.1
CDC42SE2-206ENST00000503291 NRP1O14786 923 aa21.9■■□□□ 1.1
CDC42SE2-206ENST00000503291 TLL1O43897 1013 aa21.9■■□□□ 1.1
CDC42SE2-206ENST00000503291 GALTP07902 379 aa21.9■■□□□ 1.1
CDC42SE2-206ENST00000503291 POLR2FP61218 127 aaKnown RBP21.9■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms