RNA–Protein interactions for RNA: ENST00000503060.5

USP46-204, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 5

Gene USP46, Length 2,437 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-204ENST00000503060 DYTNA2CJ06 578 aa12.37□□□□□ -0.43
USP46-204ENST00000503060 CLDN3O15551 220 aa12.37□□□□□ -0.43
USP46-204ENST00000503060 TOM1L1O75674 476 aa12.37□□□□□ -0.43
USP46-204ENST00000503060 PRKCBP05771 671 aa12.37□□□□□ -0.43
USP46-204ENST00000503060 CCNA1P78396 465 aa12.37□□□□□ -0.43
USP46-204ENST00000503060 BRSK2Q8IWQ3 736 aa12.37□□□□□ -0.43
USP46-204ENST00000503060 CHCHD4Q8N4Q1 142 aa12.37□□□□□ -0.43
USP46-204ENST00000503060 RNF149Q8NC42 400 aa12.37□□□□□ -0.43
USP46-204ENST00000503060 C2orf40Q9H1Z8 148 aa12.37□□□□□ -0.43
USP46-204ENST00000503060 ZNF408Q9H9D4 720 aa12.37□□□□□ -0.43
USP46-204ENST00000503060 TTC7AQ9ULT0 858 aaPredicted RBP12.37□□□□□ -0.43
USP46-204ENST00000503060 TRPC6Q9Y210 931 aa12.37□□□□□ -0.43
USP46-204ENST00000503060 ALG6Q9Y672 507 aa12.37□□□□□ -0.43
USP46-204ENST00000503060 CCDC188H7C350 402 aa12.37□□□□□ -0.43
USP46-204ENST00000503060 PDHXO00330 501 aa12.37□□□□□ -0.43
USP46-204ENST00000503060 RAD51CO43502 376 aa12.37□□□□□ -0.43
USP46-204ENST00000503060 HBP1O60381 514 aa12.37□□□□□ -0.43
USP46-204ENST00000503060 GRIN3BO60391 1043 aa12.37□□□□□ -0.43
USP46-204ENST00000503060 CYP1A2P05177 515 aa12.37□□□□□ -0.43
USP46-204ENST00000503060 EPHB4P54760 987 aa12.37□□□□□ -0.43
USP46-204ENST00000503060 GUCY2DQ02846 1103 aa12.37□□□□□ -0.43
USP46-204ENST00000503060 CLEC16AQ2KHT3 1053 aa12.37□□□□□ -0.43
USP46-204ENST00000503060 ZNF792Q3KQV3 632 aa12.37□□□□□ -0.43
USP46-204ENST00000503060 SEZ6Q53EL9 994 aa12.37□□□□□ -0.43
USP46-204ENST00000503060 SPOPLQ6IQ16 392 aa12.37□□□□□ -0.43
USP46-204ENST00000503060 KRT77Q7Z794 578 aa12.37□□□□□ -0.43
USP46-204ENST00000503060 OR5B17Q8NGF7 314 aa12.37□□□□□ -0.43
USP46-204ENST00000503060 TRAPPC12Q8WVT3 735 aa12.37□□□□□ -0.43
USP46-204ENST00000503060 ACO2Q99798 780 aaKnown RBP12.37□□□□□ -0.43
USP46-204ENST00000503060 GTF3C4Q9UKN8 822 aa12.37□□□□□ -0.43
USP46-204ENST00000503060 PABPN1LA6NDY0 278 aaKnown RBP12.36□□□□□ -0.43
USP46-204ENST00000503060 KRIT1O00522 736 aa12.36□□□□□ -0.43
USP46-204ENST00000503060 ATMINO43313 823 aaPredicted RBP12.36□□□□□ -0.43
USP46-204ENST00000503060 FAM189A1O60320 539 aa12.36□□□□□ -0.43
USP46-204ENST00000503060 CALCAP01258 141 aa12.36□□□□□ -0.43
USP46-204ENST00000503060 CETPP11597 493 aa12.36□□□□□ -0.43
USP46-204ENST00000503060 AARSP49588 968 aaKnown RBP eCLIP12.36□□□□□ -0.43
USP46-204ENST00000503060 ARHGAP1Q07960 439 aa12.36□□□□□ -0.43
USP46-204ENST00000503060 MAPK6Q16659 721 aa12.36□□□□□ -0.43
USP46-204ENST00000503060 DCAF12L1Q5VU92 463 aa12.36□□□□□ -0.43
USP46-204ENST00000503060 ACAD10Q6JQN1 1059 aa12.36□□□□□ -0.43
USP46-204ENST00000503060 EMBQ6PCB8 327 aa12.36□□□□□ -0.43
USP46-204ENST00000503060 ZBTB33Q86T24 672 aa12.36□□□□□ -0.43
USP46-204ENST00000503060 MYO1HQ8N1T3 1032 aa12.36□□□□□ -0.43
USP46-204ENST00000503060 ZNF653Q96CK0 615 aa12.36□□□□□ -0.43
USP46-204ENST00000503060 TCHPQ9BT92 498 aa12.36□□□□□ -0.43
USP46-204ENST00000503060 AP1M1Q9BXS5 423 aa12.36□□□□□ -0.43
USP46-204ENST00000503060 CARD9Q9H257 536 aa12.36□□□□□ -0.43
USP46-204ENST00000503060 APOBEC3GQ9HC16 384 aaKnown RBP12.36□□□□□ -0.43
USP46-204ENST00000503060 EPB41L5Q9HCM4 733 aa12.36□□□□□ -0.43
USP46-204ENST00000503060 CHORDC1Q9UHD1 332 aaPredicted RBP12.36□□□□□ -0.43
USP46-204ENST00000503060 SLC45A1Q9Y2W3 748 aa12.36□□□□□ -0.43
USP46-204ENST00000503060 ZSCAN5CA6NGD5 496 aaPredicted RBP12.36□□□□□ -0.43
USP46-204ENST00000503060 TMEM110-MUSTN1A8MSY1 372 aa12.36□□□□□ -0.43
USP46-204ENST00000503060 MIF4GDA9UHW6 222 aaKnown RBP12.36□□□□□ -0.43
USP46-204ENST00000503060 POTEJP0CG39 1038 aa12.36□□□□□ -0.43
USP46-204ENST00000503060 ACO1P21399 889 aaKnown RBP12.36□□□□□ -0.43
USP46-204ENST00000503060 TNFSF9P41273 254 aa12.36□□□□□ -0.43
USP46-204ENST00000503060 BPIFB4P59827 614 aa12.36□□□□□ -0.43
USP46-204ENST00000503060 CUL2Q13617 745 aa12.36□□□□□ -0.43
USP46-204ENST00000503060 GPR162Q16538 588 aa12.36□□□□□ -0.43
USP46-204ENST00000503060 MAP1SQ66K74 1059 aaPredicted RBP12.36□□□□□ -0.43
USP46-204ENST00000503060 ZNF677Q86XU0 584 aa12.36□□□□□ -0.43
USP46-204ENST00000503060 RHPN2Q8IUC4 686 aa12.36□□□□□ -0.43
USP46-204ENST00000503060 CCDC102AQ96A19 550 aa12.36□□□□□ -0.43
USP46-204ENST00000503060 MS4A4AQ96JQ5 239 aa12.36□□□□□ -0.43
USP46-204ENST00000503060 NUP85Q9BW27 656 aa12.36□□□□□ -0.43
USP46-204ENST00000503060 PLEKHA4Q9H4M7 779 aa12.36□□□□□ -0.43
USP46-204ENST00000503060 PCDHB2Q9Y5E7 798 aa12.36□□□□□ -0.43
USP46-204ENST00000503060 CCL15-CCL14A0A0B4J2E2 113 aa12.35□□□□□ -0.43
USP46-204ENST00000503060 BTBD19C9JJ37 291 aa12.35□□□□□ -0.43
USP46-204ENST00000503060 TULP2O00295 520 aa12.35□□□□□ -0.43
USP46-204ENST00000503060 ABLIM1O14639 778 aa12.35□□□□□ -0.43
USP46-204ENST00000503060 OGTO15294 1046 aa12.35□□□□□ -0.43
USP46-204ENST00000503060 PHACTR2O75167 634 aa12.35□□□□□ -0.43
USP46-204ENST00000503060 CLTAP09496 248 aa12.35□□□□□ -0.43
USP46-204ENST00000503060 ITGA4P13612 1032 aa12.35□□□□□ -0.43
USP46-204ENST00000503060 ADORA2AP29274 412 aa12.35□□□□□ -0.43
USP46-204ENST00000503060 CARSP49589 748 aaKnown RBP12.35□□□□□ -0.43
USP46-204ENST00000503060 GTF2A2P52657 109 aa12.35□□□□□ -0.43
USP46-204ENST00000503060 AP3M2P53677 418 aa12.35□□□□□ -0.43
USP46-204ENST00000503060 MCL1Q07820 350 aa12.35□□□□□ -0.43
USP46-204ENST00000503060 PAK2Q13177 524 aa12.35□□□□□ -0.43
USP46-204ENST00000503060 GRM1Q13255 1194 aa12.35□□□□□ -0.43
USP46-204ENST00000503060 LAMC2Q13753 1193 aa12.35□□□□□ -0.43
USP46-204ENST00000503060 TFDP1Q14186 410 aa12.35□□□□□ -0.43
USP46-204ENST00000503060 MESDQ14696 234 aa12.35□□□□□ -0.43
USP46-204ENST00000503060 CCL15Q16663 113 aa12.35□□□□□ -0.43
USP46-204ENST00000503060 TAPT1Q6NXT6 567 aa12.35□□□□□ -0.43
USP46-204ENST00000503060 ZNF564Q8TBZ8 553 aaPredicted RBP12.35□□□□□ -0.43
USP46-204ENST00000503060 CASKIN2Q8WXE0 1202 aa12.35□□□□□ -0.43
USP46-204ENST00000503060 CAVIN3Q969G5 261 aa12.35□□□□□ -0.43
USP46-204ENST00000503060 VTA1Q9NP79 307 aa12.35□□□□□ -0.43
USP46-204ENST00000503060 UVRAGQ9P2Y5 699 aa12.35□□□□□ -0.43
USP46-204ENST00000503060 TMCC3Q9ULS5 477 aa12.35□□□□□ -0.43
USP46-204ENST00000503060 ESYT3A0FGR9 886 aa12.35□□□□□ -0.43
USP46-204ENST00000503060 ANKRD33BA6NCL7 494 aa12.35□□□□□ -0.43
USP46-204ENST00000503060 FGGP02679 453 aa12.35□□□□□ -0.43
USP46-204ENST00000503060 GTF2A1P52655 376 aaPredicted RBP12.35□□□□□ -0.43
USP46-204ENST00000503060 NNTQ13423 1086 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms