RNA–Protein interactions for RNA: ENST00000498431.5

MUC1-220, Transcript of mucin 1, cell surface associated, humanhuman

TSL 1 (best)

Gene MUC1, Length 667 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MUC1-220ENST00000498431 PHLPP2Q6ZVD8 1323 aa17.6■□□□□ 0.41
MUC1-220ENST00000498431 PDCD11Q14690 1871 aaKnown RBP17.59■□□□□ 0.41
MUC1-220ENST00000498431 PRR5-ARHGAP8B1AHC4 643 aa17.59■□□□□ 0.41
MUC1-220ENST00000498431 MAN2B1O00754 1011 aa17.59■□□□□ 0.41
MUC1-220ENST00000498431 ZNF197O14709 1029 aa17.59■□□□□ 0.41
MUC1-220ENST00000498431 MICAL2O94851 1124 aa17.59■□□□□ 0.41
MUC1-220ENST00000498431 KCNE1P15382 129 aa17.59■□□□□ 0.41
MUC1-220ENST00000498431 MUTP22033 750 aa17.59■□□□□ 0.41
MUC1-220ENST00000498431 ARHGAP8P85298 464 aa17.59■□□□□ 0.41
MUC1-220ENST00000498431 TWF1Q12792 350 aa17.59■□□□□ 0.41
MUC1-220ENST00000498431 GAS6Q14393 721 aa17.59■□□□□ 0.41
MUC1-220ENST00000498431 CTXN3Q4LDR2 81 aa17.59■□□□□ 0.41
MUC1-220ENST00000498431 TPGS2Q68CL5 300 aa17.59■□□□□ 0.41
MUC1-220ENST00000498431 HAUS3Q68CZ6 603 aa17.59■□□□□ 0.41
MUC1-220ENST00000498431 APBB1IPQ7Z5R6 666 aaPredicted RBP17.59■□□□□ 0.41
MUC1-220ENST00000498431 C4orf32Q8N8J7 132 aa17.59■□□□□ 0.41
MUC1-220ENST00000498431 FAM3CQ92520 227 aa17.59■□□□□ 0.41
MUC1-220ENST00000498431 SMARCD2Q92925 531 aa17.59■□□□□ 0.41
MUC1-220ENST00000498431 IRF7Q92985 503 aa17.59■□□□□ 0.41
MUC1-220ENST00000498431 ZBTB45Q96K62 511 aaPredicted RBP17.59■□□□□ 0.41
MUC1-220ENST00000498431 SUSD3Q96L08 255 aa17.59■□□□□ 0.41
MUC1-220ENST00000498431 LMAN1LQ9HAT1 526 aa17.59■□□□□ 0.41
MUC1-220ENST00000498431 DDX19AQ9NUU7 478 aaKnown RBP17.59■□□□□ 0.41
MUC1-220ENST00000498431 CNTN3Q9P232 1028 aa17.59■□□□□ 0.41
MUC1-220ENST00000498431 NUB1Q9Y5A7 615 aa17.59■□□□□ 0.41
MUC1-220ENST00000498431 PIAS3Q9Y6X2 628 aa17.59■□□□□ 0.41
MUC1-220ENST00000498431 H7C4K7 107 aa17.58■□□□□ 0.4
MUC1-220ENST00000498431 HIP1RO75146 1068 aa17.58■□□□□ 0.4
MUC1-220ENST00000498431 HARSP12081 509 aaKnown RBP17.58■□□□□ 0.4
MUC1-220ENST00000498431 MYL4P12829 197 aa17.58■□□□□ 0.4
MUC1-220ENST00000498431 PSMC3P17980 439 aa17.58■□□□□ 0.4
MUC1-220ENST00000498431 SDHBP21912 280 aa17.58■□□□□ 0.4
MUC1-220ENST00000498431 PROZP22891 400 aa17.58■□□□□ 0.4
MUC1-220ENST00000498431 FXR2P51116 673 aaKnown RBP eCLIP17.58■□□□□ 0.4
MUC1-220ENST00000498431 SATB1Q01826 763 aa17.58■□□□□ 0.4
MUC1-220ENST00000498431 SPEM2Q0P670 501 aa17.58■□□□□ 0.4
MUC1-220ENST00000498431 SAFBQ15424 915 aaKnown RBP eCLIP17.58■□□□□ 0.4
MUC1-220ENST00000498431 SEZ6Q53EL9 994 aa17.58■□□□□ 0.4
MUC1-220ENST00000498431 TTC38Q5R3I4 469 aa17.58■□□□□ 0.4
MUC1-220ENST00000498431 RNF19BQ6ZMZ0 732 aa17.58■□□□□ 0.4
MUC1-220ENST00000498431 MAMSTRQ6ZN01 415 aa17.58■□□□□ 0.4
MUC1-220ENST00000498431 RSPRY1Q96DX4 576 aa17.58■□□□□ 0.4
MUC1-220ENST00000498431 TBC1D32Q96NH3 1257 aa17.58■□□□□ 0.4
MUC1-220ENST00000498431 ACAP3Q96P50 834 aa17.58■□□□□ 0.4
MUC1-220ENST00000498431 MRPL4Q9BYD3 311 aaKnown RBP17.58■□□□□ 0.4
MUC1-220ENST00000498431 TMEM134Q9H6X4 195 aa17.58■□□□□ 0.4
MUC1-220ENST00000498431 ARHGAP28Q9P2N2 729 aa17.58■□□□□ 0.4
MUC1-220ENST00000498431 GMEB2Q9UKD1 530 aa17.58■□□□□ 0.4
MUC1-220ENST00000498431 DYNC1LI1Q9Y6G9 523 aaKnown RBP17.58■□□□□ 0.4
MUC1-220ENST00000498431 CHD8Q9HCK8 2581 aa17.57■□□□□ 0.4
MUC1-220ENST00000498431 E9PMD0 336 aa17.57■□□□□ 0.4
MUC1-220ENST00000498431 ARNTLO00327 626 aa17.57■□□□□ 0.4
MUC1-220ENST00000498431 VNN2O95498 520 aa17.57■□□□□ 0.4
MUC1-220ENST00000498431 MCF2P10911 925 aa17.57■□□□□ 0.4
MUC1-220ENST00000498431 CCNE1P24864 410 aa17.57■□□□□ 0.4
MUC1-220ENST00000498431 MCM4P33991 863 aa17.57■□□□□ 0.4
MUC1-220ENST00000498431 NEK4P51957 841 aa17.57■□□□□ 0.4
MUC1-220ENST00000498431 EPHA5P54756 1037 aa17.57■□□□□ 0.4
MUC1-220ENST00000498431 DMWDQ09019 674 aa17.57■□□□□ 0.4
MUC1-220ENST00000498431 MAPK7Q13164 816 aa17.57■□□□□ 0.4
MUC1-220ENST00000498431 ORC2Q13416 577 aaPredicted RBP17.57■□□□□ 0.4
MUC1-220ENST00000498431 TEAD2Q15562 447 aa17.57■□□□□ 0.4
MUC1-220ENST00000498431 CYP4A22Q5TCH4 519 aa17.57■□□□□ 0.4
MUC1-220ENST00000498431 ZNF280DQ6N043 979 aa17.57■□□□□ 0.4
MUC1-220ENST00000498431 ZSCAN18Q8TBC5 510 aaPredicted RBP17.57■□□□□ 0.4
MUC1-220ENST00000498431 DDX12PQ92771 950 aa17.57■□□□□ 0.4
MUC1-220ENST00000498431 ZNF512Q96ME7 567 aaPredicted RBP17.57■□□□□ 0.4
MUC1-220ENST00000498431 RUSC1Q9BVN2 902 aa17.57■□□□□ 0.4
MUC1-220ENST00000498431 TRPV5Q9NQA5 729 aa17.57■□□□□ 0.4
MUC1-220ENST00000498431 LRWD1Q9UFC0 647 aa17.57■□□□□ 0.4
MUC1-220ENST00000498431 TUBGCP4Q9UGJ1 667 aa17.57■□□□□ 0.4
MUC1-220ENST00000498431 AFF4Q9UHB7 1163 aaKnown RBP17.57■□□□□ 0.4
MUC1-220ENST00000498431 CFAP47Q6ZTR5 3102 aa17.57■□□□□ 0.4
MUC1-220ENST00000498431 PP2D1A8MPX8 630 aa17.56■□□□□ 0.4
MUC1-220ENST00000498431 CHRNB1P11230 501 aa17.56■□□□□ 0.4
MUC1-220ENST00000498431 RPL9P32969 192 aaKnown RBP17.56■□□□□ 0.4
MUC1-220ENST00000498431 NRLP54845 237 aa17.56■□□□□ 0.4
MUC1-220ENST00000498431 DMP1Q13316 513 aaPredicted RBP17.56■□□□□ 0.4
MUC1-220ENST00000498431 SLC10A6Q3KNW5 377 aa17.56■□□□□ 0.4
MUC1-220ENST00000498431 WDR44Q5JSH3 913 aa17.56■□□□□ 0.4
MUC1-220ENST00000498431 IQCEQ6IPM2 695 aa17.56■□□□□ 0.4
MUC1-220ENST00000498431 MPZL3Q6UWV2 235 aa17.56■□□□□ 0.4
MUC1-220ENST00000498431 GPIHBP1Q8IV16 184 aa17.56■□□□□ 0.4
MUC1-220ENST00000498431 MFSD6LQ8IWD5 586 aa17.56■□□□□ 0.4
MUC1-220ENST00000498431 ELMOD1Q8N336 334 aa17.56■□□□□ 0.4
MUC1-220ENST00000498431 SHKBP1Q8TBC3 707 aa17.56■□□□□ 0.4
MUC1-220ENST00000498431 SNX29Q8TEQ0 813 aa17.56■□□□□ 0.4
MUC1-220ENST00000498431 DEPDC1BQ8WUY9 529 aa17.56■□□□□ 0.4
MUC1-220ENST00000498431 C8orf76Q96K31 380 aa17.56■□□□□ 0.4
MUC1-220ENST00000498431 RTKNQ9BST9 563 aa17.56■□□□□ 0.4
MUC1-220ENST00000498431 TCHPQ9BT92 498 aa17.56■□□□□ 0.4
MUC1-220ENST00000498431 FOXP1Q9H334 677 aaPredicted RBP17.56■□□□□ 0.4
MUC1-220ENST00000498431 TRPV4Q9HBA0 871 aa17.56■□□□□ 0.4
MUC1-220ENST00000498431 KMT5AQ9NQR1 393 aa17.56■□□□□ 0.4
MUC1-220ENST00000498431 RBM12Q9NTZ6 932 aaKnown RBP17.56■□□□□ 0.4
MUC1-220ENST00000498431 DAXXQ9UER7 740 aaPredicted RBP17.56■□□□□ 0.4
MUC1-220ENST00000498431 LAMA1P25391 3075 aa17.55■□□□□ 0.4
MUC1-220ENST00000498431 SFI1A8K8P3 1242 aa17.55■□□□□ 0.4
MUC1-220ENST00000498431 HEPACAM2A8MVW5 462 aa17.55■□□□□ 0.4
MUC1-220ENST00000498431 ZNF263O14978 683 aa17.55■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms