RNA–Protein interactions for RNA: ENST00000498339.1

CDK9-205, Transcript of cyclin dependent kinase 9, humanhuman

TSL 2

Gene CDK9, Length 458 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK9-205ENST00000498339 EEF1DP3Q658K8 133 aa12.82□□□□□ -0.36
CDK9-205ENST00000498339 SLC8B1Q6J4K2 584 aa12.82□□□□□ -0.36
CDK9-205ENST00000498339 RUFY3Q7L099 469 aa12.82□□□□□ -0.36
CDK9-205ENST00000498339 APBB1IPQ7Z5R6 666 aaPredicted RBP12.82□□□□□ -0.36
CDK9-205ENST00000498339 MFSD6LQ8IWD5 586 aa12.82□□□□□ -0.36
CDK9-205ENST00000498339 TTC8Q8TAM2 541 aa12.82□□□□□ -0.36
CDK9-205ENST00000498339 PPP1R10Q96QC0 940 aaKnown RBP12.82□□□□□ -0.36
CDK9-205ENST00000498339 HSD17B14Q9BPX1 270 aa12.82□□□□□ -0.36
CDK9-205ENST00000498339 BRMS1Q9HCU9 246 aa12.82□□□□□ -0.36
CDK9-205ENST00000498339 BAHCC1Q9P281 2608 aa12.82□□□□□ -0.36
CDK9-205ENST00000498339 FAM205CA6NFA0 338 aa12.81□□□□□ -0.36
CDK9-205ENST00000498339 K7ESF4 209 aa12.81□□□□□ -0.36
CDK9-205ENST00000498339 ACKR2O00590 384 aa12.81□□□□□ -0.36
CDK9-205ENST00000498339 PODXLO00592 558 aa12.81□□□□□ -0.36
CDK9-205ENST00000498339 NEMFO60524 1076 aa12.81□□□□□ -0.36
CDK9-205ENST00000498339 ABLIM3O94929 683 aa12.81□□□□□ -0.36
CDK9-205ENST00000498339 LIMK1P53667 647 aa12.81□□□□□ -0.36
CDK9-205ENST00000498339 SHC2P98077 582 aa12.81□□□□□ -0.36
CDK9-205ENST00000498339 CTXN3Q4LDR2 81 aa12.81□□□□□ -0.36
CDK9-205ENST00000498339 EARS2Q5JPH6 523 aaKnown RBP12.81□□□□□ -0.36
CDK9-205ENST00000498339 DGKKQ5KSL6 1271 aa12.81□□□□□ -0.36
CDK9-205ENST00000498339 STPG1Q5TH74 334 aa12.81□□□□□ -0.36
CDK9-205ENST00000498339 ZNF280DQ6N043 979 aa12.81□□□□□ -0.36
CDK9-205ENST00000498339 WDR5BQ86VZ2 330 aa12.81□□□□□ -0.36
CDK9-205ENST00000498339 TCEAL8Q8IYN2 117 aa12.81□□□□□ -0.36
CDK9-205ENST00000498339 LEMD2Q8NC56 503 aa12.81□□□□□ -0.36
CDK9-205ENST00000498339 BSNDQ8WZ55 320 aa12.81□□□□□ -0.36
CDK9-205ENST00000498339 ZNF274Q96GC6 653 aaPredicted RBP12.81□□□□□ -0.36
CDK9-205ENST00000498339 KIFC3Q9BVG8 833 aa12.81□□□□□ -0.36
CDK9-205ENST00000498339 C8orf33Q9H7E9 229 aaPredicted RBP12.81□□□□□ -0.36
CDK9-205ENST00000498339 TOPORSQ9NS56 1045 aaPredicted RBP12.81□□□□□ -0.36
CDK9-205ENST00000498339 GJB4Q9NTQ9 266 aa12.81□□□□□ -0.36
CDK9-205ENST00000498339 CYP46A1Q9Y6A2 500 aa12.81□□□□□ -0.36
CDK9-205ENST00000498339 NCANO14594 1321 aa12.81□□□□□ -0.36
CDK9-205ENST00000498339 WDFY3Q8IZQ1 3526 aa12.8□□□□□ -0.36
CDK9-205ENST00000498339 FAM208BQ5VWN6 2430 aa12.8□□□□□ -0.36
CDK9-205ENST00000498339 ARHGEF35A5YM69 484 aa12.8□□□□□ -0.36
CDK9-205ENST00000498339 SPECC1L-ADORA2AF8WAN1 911 aa12.8□□□□□ -0.36
CDK9-205ENST00000498339 DPYSL4O14531 572 aa12.8□□□□□ -0.36
CDK9-205ENST00000498339 SYN3O14994 580 aa12.8□□□□□ -0.36
CDK9-205ENST00000498339 CHADO15335 359 aa12.8□□□□□ -0.36
CDK9-205ENST00000498339 PAPSS2O95340 614 aaPredicted RBP12.8□□□□□ -0.36
CDK9-205ENST00000498339 EDN1P05305 212 aa12.8□□□□□ -0.36
CDK9-205ENST00000498339 PROS1P07225 676 aa12.8□□□□□ -0.36
CDK9-205ENST00000498339 MCM4P33991 863 aa12.8□□□□□ -0.36
CDK9-205ENST00000498339 KRT2P35908 639 aa12.8□□□□□ -0.36
CDK9-205ENST00000498339 NAMPTP43490 491 aa12.8□□□□□ -0.36
CDK9-205ENST00000498339 OSTNP61366 133 aa12.8□□□□□ -0.36
CDK9-205ENST00000498339 SOX4Q06945 474 aaPredicted RBP12.8□□□□□ -0.36
CDK9-205ENST00000498339 NR5A1Q13285 461 aa12.8□□□□□ -0.36
CDK9-205ENST00000498339 PON2Q15165 354 aa12.8□□□□□ -0.36
CDK9-205ENST00000498339 PPP2R5AQ15172 486 aa12.8□□□□□ -0.36
CDK9-205ENST00000498339 ATF7IP2Q5U623 682 aa12.8□□□□□ -0.36
CDK9-205ENST00000498339 TPGS2Q68CL5 300 aa12.8□□□□□ -0.36
CDK9-205ENST00000498339 PSAPL1Q6NUJ1 521 aa12.8□□□□□ -0.36
CDK9-205ENST00000498339 CD300LGQ6UXG3 332 aa12.8□□□□□ -0.36
CDK9-205ENST00000498339 HAUS6Q7Z4H7 955 aa12.8□□□□□ -0.36
CDK9-205ENST00000498339 GPIHBP1Q8IV16 184 aa12.8□□□□□ -0.36
CDK9-205ENST00000498339 E2F7Q96AV8 911 aa12.8□□□□□ -0.36
CDK9-205ENST00000498339 IFT74Q96LB3 600 aa12.8□□□□□ -0.36
CDK9-205ENST00000498339 CCDC94Q9BW85 323 aaPredicted RBP12.8□□□□□ -0.36
CDK9-205ENST00000498339 CCDC113Q9H0I3 377 aa12.8□□□□□ -0.36
CDK9-205ENST00000498339 RXFP3Q9NSD7 469 aa12.8□□□□□ -0.36
CDK9-205ENST00000498339 SLC38A7Q9NVC3 462 aa12.8□□□□□ -0.36
CDK9-205ENST00000498339 FBXL5Q9UKA1 691 aa12.8□□□□□ -0.36
CDK9-205ENST00000498339 SMIM28A0A1B0GU29 152 aa12.79□□□□□ -0.36
CDK9-205ENST00000498339 A0A1W2PRU2 124 aa12.79□□□□□ -0.36
CDK9-205ENST00000498339 ARNTLO00327 626 aa12.79□□□□□ -0.36
CDK9-205ENST00000498339 DTNBO60941 627 aa12.79□□□□□ -0.36
CDK9-205ENST00000498339 MOSPD3O75425 235 aa12.79□□□□□ -0.36
CDK9-205ENST00000498339 RPP40O75818 363 aaKnown RBP12.79□□□□□ -0.36
CDK9-205ENST00000498339 EPN2O95208 641 aa12.79□□□□□ -0.36
CDK9-205ENST00000498339 CTHP32929 405 aa12.79□□□□□ -0.36
CDK9-205ENST00000498339 PXNP49023 591 aaPredicted RBP12.79□□□□□ -0.36
CDK9-205ENST00000498339 ZNF568Q3ZCX4 644 aa12.79□□□□□ -0.36
CDK9-205ENST00000498339 TXNDC11Q6PKC3 985 aa12.79□□□□□ -0.36
CDK9-205ENST00000498339 CACNA2D4Q7Z3S7 1137 aa12.79□□□□□ -0.36
CDK9-205ENST00000498339 SHKBP1Q8TBC3 707 aa12.79□□□□□ -0.36
CDK9-205ENST00000498339 GAB3Q8WWW8 586 aa12.79□□□□□ -0.36
CDK9-205ENST00000498339 GPR88Q9GZN0 384 aa12.79□□□□□ -0.36
CDK9-205ENST00000498339 SMOC1Q9H4F8 434 aa12.79□□□□□ -0.36
CDK9-205ENST00000498339 TRPV4Q9HBA0 871 aa12.79□□□□□ -0.36
CDK9-205ENST00000498339 C2orf42Q9NWW7 574 aa12.79□□□□□ -0.36
CDK9-205ENST00000498339 CEP72Q9P209 647 aa12.79□□□□□ -0.36
CDK9-205ENST00000498339 STK36Q9NRP7 1315 aa12.79□□□□□ -0.36
CDK9-205ENST00000498339 MYH11P35749 1972 aa12.78□□□□□ -0.36
CDK9-205ENST00000498339 C1QTNF9BB2RNN3 333 aa12.78□□□□□ -0.36
CDK9-205ENST00000498339 REC8O95072 547 aa12.78□□□□□ -0.36
CDK9-205ENST00000498339 KCNK5O95279 499 aa12.78□□□□□ -0.36
CDK9-205ENST00000498339 ZNF806P0C7X5 589 aa12.78□□□□□ -0.36
CDK9-205ENST00000498339 C1QTNF9P0C862 333 aa12.78□□□□□ -0.36
CDK9-205ENST00000498339 HARSP12081 509 aaKnown RBP12.78□□□□□ -0.36
CDK9-205ENST00000498339 XRCC6P12956 609 aaKnown RBP eCLIP12.78□□□□□ -0.36
CDK9-205ENST00000498339 HOXC13P31276 330 aa12.78□□□□□ -0.36
CDK9-205ENST00000498339 SCRN1Q12765 414 aa12.78□□□□□ -0.36
CDK9-205ENST00000498339 FOXC1Q12948 553 aa12.78□□□□□ -0.36
CDK9-205ENST00000498339 RNF43Q68DV7 783 aa12.78□□□□□ -0.36
CDK9-205ENST00000498339 PADI6Q6TGC4 694 aa12.78□□□□□ -0.36
CDK9-205ENST00000498339 UNQ6494/PRO21346Q6UXR6 183 aa12.78□□□□□ -0.36
CDK9-205ENST00000498339 RNF19BQ6ZMZ0 732 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms