RNA–Protein interactions for RNA: ENST00000497722.2

PSPC1-205, Transcript of paraspeckle component 1, humanhuman

TSL 2

Gene PSPC1, Length 448 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-205ENST00000497722 ENDOD1O94919 500 aa4.25□□□□□ -1.73
PSPC1-205ENST00000497722 FOSP01100 380 aaPredicted RBP4.25□□□□□ -1.73
PSPC1-205ENST00000497722 POMCP01189 267 aa4.25□□□□□ -1.73
PSPC1-205ENST00000497722 RPLP2P05387 115 aaKnown RBP4.25□□□□□ -1.73
PSPC1-205ENST00000497722 PF4V1P10720 104 aa4.25□□□□□ -1.73
PSPC1-205ENST00000497722 ITGB6P18564 788 aa4.25□□□□□ -1.73
PSPC1-205ENST00000497722 ATP5JP18859 108 aa4.25□□□□□ -1.73
PSPC1-205ENST00000497722 FGFR4P22455 802 aa4.25□□□□□ -1.73
PSPC1-205ENST00000497722 RAP2BP61225 183 aa4.25□□□□□ -1.73
PSPC1-205ENST00000497722 CXADRP78310 365 aa4.25□□□□□ -1.73
PSPC1-205ENST00000497722 MRPS21P82921 87 aaKnown RBP4.25□□□□□ -1.73
PSPC1-205ENST00000497722 PPP2R5AQ15172 486 aa4.25□□□□□ -1.73
PSPC1-205ENST00000497722 CCDC157Q569K6 752 aa4.25□□□□□ -1.73
PSPC1-205ENST00000497722 RSPH3Q86UC2 560 aa4.25□□□□□ -1.73
PSPC1-205ENST00000497722 Q8NA96 180 aa4.25□□□□□ -1.73
PSPC1-205ENST00000497722 SIMC1Q8NDZ2 872 aa4.25□□□□□ -1.73
PSPC1-205ENST00000497722 JADE3Q92613 823 aa4.25□□□□□ -1.73
PSPC1-205ENST00000497722 HSPBAP1Q96EW2 488 aa4.25□□□□□ -1.73
PSPC1-205ENST00000497722 CYFIP2Q96F07 1278 aa4.25□□□□□ -1.73
PSPC1-205ENST00000497722 CCDC136Q96JN2 1154 aa4.25□□□□□ -1.73
PSPC1-205ENST00000497722 PHACTR3Q96KR7 559 aa4.25□□□□□ -1.73
PSPC1-205ENST00000497722 SLC13A1Q9BZW2 595 aa4.25□□□□□ -1.73
PSPC1-205ENST00000497722 ZFPL1O95159 310 aa4.24□□□□□ -1.73
PSPC1-205ENST00000497722 ERBB2P04626 1255 aa4.24□□□□□ -1.73
PSPC1-205ENST00000497722 RAP2AP10114 183 aa4.24□□□□□ -1.73
PSPC1-205ENST00000497722 RAB27AP51159 221 aa4.24□□□□□ -1.73
PSPC1-205ENST00000497722 PIN1Q13526 163 aaPredicted RBP4.24□□□□□ -1.73
PSPC1-205ENST00000497722 CYP2A13Q16696 494 aa4.24□□□□□ -1.73
PSPC1-205ENST00000497722 DACT2Q5SW24 774 aa4.24□□□□□ -1.73
PSPC1-205ENST00000497722 ZNF362Q5T0B9 420 aaPredicted RBP4.24□□□□□ -1.73
PSPC1-205ENST00000497722 PPP4R3AQ6IN85 833 aa4.24□□□□□ -1.73
PSPC1-205ENST00000497722 WDR75Q8IWA0 830 aaKnown RBP4.24□□□□□ -1.73
PSPC1-205ENST00000497722 RHOT1Q8IXI2 618 aa4.24□□□□□ -1.73
PSPC1-205ENST00000497722 FAM43AQ8N2R8 423 aa4.24□□□□□ -1.73
PSPC1-205ENST00000497722 CCHCR1Q8TD31 782 aa4.24□□□□□ -1.73
PSPC1-205ENST00000497722 NRG4Q8WWG1 115 aa4.24□□□□□ -1.73
PSPC1-205ENST00000497722 HDAC10Q969S8 669 aa4.24□□□□□ -1.73
PSPC1-205ENST00000497722 LRGUKQ96M69 825 aa4.24□□□□□ -1.73
PSPC1-205ENST00000497722 ALOXE3Q9BYJ1 711 aa4.24□□□□□ -1.73
PSPC1-205ENST00000497722 RNPEPQ9H4A4 650 aa4.24□□□□□ -1.73
PSPC1-205ENST00000497722 MANSC1Q9H8J5 431 aa4.24□□□□□ -1.73
PSPC1-205ENST00000497722 ZIM2Q9NZV7 527 aa4.24□□□□□ -1.73
PSPC1-205ENST00000497722 KCNE5Q9UJ90 142 aa4.24□□□□□ -1.73
PSPC1-205ENST00000497722 ANKRD6Q9Y2G4 727 aa4.24□□□□□ -1.73
PSPC1-205ENST00000497722 ITGAMP11215 1152 aa4.23□□□□□ -1.73
PSPC1-205ENST00000497722 C5AR1P21730 350 aa4.23□□□□□ -1.73
PSPC1-205ENST00000497722 FDXRP22570 491 aa4.23□□□□□ -1.73
PSPC1-205ENST00000497722 PLA2G5P39877 138 aa4.23□□□□□ -1.73
PSPC1-205ENST00000497722 KRT85P78386 507 aa4.23□□□□□ -1.73
PSPC1-205ENST00000497722 SLFN5Q08AF3 891 aa4.23□□□□□ -1.73
PSPC1-205ENST00000497722 MPP3Q13368 585 aa4.23□□□□□ -1.73
PSPC1-205ENST00000497722 ATP2B3Q16720 1220 aa4.23□□□□□ -1.73
PSPC1-205ENST00000497722 PPP4R4Q6NUP7 873 aa4.23□□□□□ -1.73
PSPC1-205ENST00000497722 ZNF529Q6P280 563 aa4.23□□□□□ -1.73
PSPC1-205ENST00000497722 CHPFQ8IZ52 775 aa4.23□□□□□ -1.73
PSPC1-205ENST00000497722 DCBLD1Q8N8Z6 715 aa4.23□□□□□ -1.73
PSPC1-205ENST00000497722 SLC9A6Q92581 669 aa4.23□□□□□ -1.73
PSPC1-205ENST00000497722 DPF2Q92785 391 aa4.23□□□□□ -1.73
PSPC1-205ENST00000497722 CAVIN3Q969G5 261 aa4.23□□□□□ -1.73
PSPC1-205ENST00000497722 Q96MF0 132 aa4.23□□□□□ -1.73
PSPC1-205ENST00000497722 GALNT9Q9HCQ5 603 aa4.23□□□□□ -1.73
PSPC1-205ENST00000497722 TMEM140Q9NV12 185 aa4.23□□□□□ -1.73
PSPC1-205ENST00000497722 FOXJ2Q9P0K8 574 aa4.23□□□□□ -1.73
PSPC1-205ENST00000497722 KLHL42Q9P2K6 505 aa4.23□□□□□ -1.73
PSPC1-205ENST00000497722 HSFX1Q9UBD0 423 aa4.23□□□□□ -1.73
PSPC1-205ENST00000497722 USP25Q9UHP3 1055 aa4.23□□□□□ -1.73
PSPC1-205ENST00000497722 NOB1Q9ULX3 412 aaKnown RBP4.23□□□□□ -1.73
PSPC1-205ENST00000497722 AATKQ6ZMQ8 1374 aa4.23□□□□□ -1.73
PSPC1-205ENST00000497722 MYADML2A6NDP7 307 aa4.22□□□□□ -1.73
PSPC1-205ENST00000497722 TEX33O43247 280 aa4.22□□□□□ -1.73
PSPC1-205ENST00000497722 PCDHGA12O60330 932 aa4.22□□□□□ -1.73
PSPC1-205ENST00000497722 GPR32O75388 356 aa4.22□□□□□ -1.73
PSPC1-205ENST00000497722 U2AF1L5P0DN76 240 aaPredicted RBP4.22□□□□□ -1.73
PSPC1-205ENST00000497722 CKBP12277 381 aa4.22□□□□□ -1.73
PSPC1-205ENST00000497722 SLC6A4P31645 630 aa4.22□□□□□ -1.73
PSPC1-205ENST00000497722 PTH2RP49190 550 aa4.22□□□□□ -1.73
PSPC1-205ENST00000497722 ADKP55263 362 aaKnown RBP4.22□□□□□ -1.73
PSPC1-205ENST00000497722 C21orf58P58505 322 aa4.22□□□□□ -1.73
PSPC1-205ENST00000497722 NOMO3P69849 1222 aa4.22□□□□□ -1.73
PSPC1-205ENST00000497722 HSD11B2P80365 405 aa4.22□□□□□ -1.73
PSPC1-205ENST00000497722 U2AF1Q01081 240 aaKnown RBP eCLIP4.22□□□□□ -1.73
PSPC1-205ENST00000497722 CREMQ03060 361 aa4.22□□□□□ -1.73
PSPC1-205ENST00000497722 MCL1Q07820 350 aa4.22□□□□□ -1.73
PSPC1-205ENST00000497722 ZNF169Q14929 603 aaPredicted RBP4.22□□□□□ -1.73
PSPC1-205ENST00000497722 ODF1Q14990 250 aa4.22□□□□□ -1.73
PSPC1-205ENST00000497722 NOMO2Q5JPE7 1267 aa4.22□□□□□ -1.73
PSPC1-205ENST00000497722 IFIT1BQ5T764 474 aaKnown RBP4.22□□□□□ -1.73
PSPC1-205ENST00000497722 STRIP1Q5VSL9 837 aa4.22□□□□□ -1.73
PSPC1-205ENST00000497722 GADL1Q6ZQY3 521 aa4.22□□□□□ -1.73
PSPC1-205ENST00000497722 UBE3BQ7Z3V4 1068 aa4.22□□□□□ -1.73
PSPC1-205ENST00000497722 LNX2Q8N448 690 aa4.22□□□□□ -1.73
PSPC1-205ENST00000497722 CPA6Q8N4T0 437 aa4.22□□□□□ -1.73
PSPC1-205ENST00000497722 JPH3Q8WXH2 748 aaPredicted RBP4.22□□□□□ -1.73
PSPC1-205ENST00000497722 UNKLQ9H9P5 680 aaKnown RBP4.22□□□□□ -1.73
PSPC1-205ENST00000497722 TDP1Q9NUW8 608 aa4.22□□□□□ -1.73
PSPC1-205ENST00000497722 VSX1Q9NZR4 365 aaPredicted RBP4.22□□□□□ -1.73
PSPC1-205ENST00000497722 RNF181Q9P0P0 153 aa4.22□□□□□ -1.73
PSPC1-205ENST00000497722 PTGFRNQ9P2B2 879 aa4.22□□□□□ -1.73
PSPC1-205ENST00000497722 TUBD1Q9UJT1 453 aa4.22□□□□□ -1.73
PSPC1-205ENST00000497722 PCDHGA9Q9Y5G4 932 aaKnown RBP4.22□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms