RNA–Protein interactions for RNA: ENST00000496375.1

CXCL12-208, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 5

Gene CXCL12, Length 803 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-208ENST00000496375 RPL9P32969 192 aaKnown RBP15.69■□□□□ 0.1
CXCL12-208ENST00000496375 SLC12A3P55017 1021 aa15.69■□□□□ 0.1
CXCL12-208ENST00000496375 ARPP19P56211 112 aa15.69■□□□□ 0.1
CXCL12-208ENST00000496375 KRT85P78386 507 aa15.69■□□□□ 0.1
CXCL12-208ENST00000496375 CACNB1Q02641 598 aaPredicted RBP15.69■□□□□ 0.1
CXCL12-208ENST00000496375 SPECC1Q5M775 1068 aa15.69■□□□□ 0.1
CXCL12-208ENST00000496375 SLC8B1Q6J4K2 584 aa15.69■□□□□ 0.1
CXCL12-208ENST00000496375 NPAS3Q8IXF0 933 aa15.69■□□□□ 0.1
CXCL12-208ENST00000496375 ZNF461Q8TAF7 563 aa15.69■□□□□ 0.1
CXCL12-208ENST00000496375 ING5Q8WYH8 240 aa15.69■□□□□ 0.1
CXCL12-208ENST00000496375 EPSTI1Q96J88 318 aa15.69■□□□□ 0.1
CXCL12-208ENST00000496375 CDK5RAP3Q96JB5 506 aa15.69■□□□□ 0.1
CXCL12-208ENST00000496375 STK17AQ9UEE5 414 aa15.69■□□□□ 0.1
CXCL12-208ENST00000496375 TCHHQ07283 1943 aa15.68■□□□□ 0.1
CXCL12-208ENST00000496375 FAM186AA6NE01 2351 aa15.68■□□□□ 0.1
CXCL12-208ENST00000496375 NPHP3-ACAD11A0A0J9YXS1 232 aa15.68■□□□□ 0.1
CXCL12-208ENST00000496375 H7C4K7 107 aa15.68■□□□□ 0.1
CXCL12-208ENST00000496375 SYN3O14994 580 aa15.68■□□□□ 0.1
CXCL12-208ENST00000496375 TBC1D4O60343 1298 aa15.68■□□□□ 0.1
CXCL12-208ENST00000496375 ABLIM3O94929 683 aa15.68■□□□□ 0.1
CXCL12-208ENST00000496375 PLCG1P19174 1290 aa15.68■□□□□ 0.1
CXCL12-208ENST00000496375 ELF1P32519 619 aa15.68■□□□□ 0.1
CXCL12-208ENST00000496375 KARSQ15046 597 aaKnown RBP15.68■□□□□ 0.1
CXCL12-208ENST00000496375 SLC10A6Q3KNW5 377 aa15.68■□□□□ 0.1
CXCL12-208ENST00000496375 ZPBP2Q6X784 338 aa15.68■□□□□ 0.1
CXCL12-208ENST00000496375 KXD1Q9BQD3 176 aa15.68■□□□□ 0.1
CXCL12-208ENST00000496375 FOXQ1Q9C009 403 aa15.68■□□□□ 0.1
CXCL12-208ENST00000496375 FBXL5Q9UKA1 691 aa15.68■□□□□ 0.1
CXCL12-208ENST00000496375 MRPS23Q9Y3D9 190 aaKnown RBP15.68■□□□□ 0.1
CXCL12-208ENST00000496375 SIT1Q9Y3P8 196 aa15.68■□□□□ 0.1
CXCL12-208ENST00000496375 ARHGEF37A1IGU5 675 aa15.67■□□□□ 0.1
CXCL12-208ENST00000496375 PRRG1O14668 218 aa15.67■□□□□ 0.1
CXCL12-208ENST00000496375 CLDN3O15551 220 aa15.67■□□□□ 0.1
CXCL12-208ENST00000496375 LRG1P02750 347 aa15.67■□□□□ 0.1
CXCL12-208ENST00000496375 RHOP08100 348 aa15.67■□□□□ 0.1
CXCL12-208ENST00000496375 MCM4P33991 863 aa15.67■□□□□ 0.1
CXCL12-208ENST00000496375 TXLNAP40222 546 aa15.67■□□□□ 0.1
CXCL12-208ENST00000496375 MATR3P43243 847 aaKnown RBP eCLIP15.67■□□□□ 0.1
CXCL12-208ENST00000496375 STARD6P59095 220 aa15.67■□□□□ 0.1
CXCL12-208ENST00000496375 MCL1Q07820 350 aa15.67■□□□□ 0.1
CXCL12-208ENST00000496375 MRPL58Q14197 206 aaKnown RBP15.67■□□□□ 0.1
CXCL12-208ENST00000496375 SLC5A9Q2M3M2 681 aa15.67■□□□□ 0.1
CXCL12-208ENST00000496375 ARSHQ5FYA8 562 aa15.67■□□□□ 0.1
CXCL12-208ENST00000496375 SHC4Q6S5L8 630 aa15.67■□□□□ 0.1
CXCL12-208ENST00000496375 PJA1Q8NG27 643 aa15.67■□□□□ 0.1
CXCL12-208ENST00000496375 LEO1Q8WVC0 666 aaPredicted RBP15.67■□□□□ 0.1
CXCL12-208ENST00000496375 RAD54LQ92698 747 aa15.67■□□□□ 0.1
CXCL12-208ENST00000496375 KCNN1Q92952 543 aa15.67■□□□□ 0.1
CXCL12-208ENST00000496375 BICD1Q96G01 975 aa15.67■□□□□ 0.1
CXCL12-208ENST00000496375 SUSD3Q96L08 255 aa15.67■□□□□ 0.1
CXCL12-208ENST00000496375 SCAND2PQ9GZW5 306 aaPredicted RBP15.67■□□□□ 0.1
CXCL12-208ENST00000496375 CYP4F11Q9HBI6 524 aa15.67■□□□□ 0.1
CXCL12-208ENST00000496375 DLGAP2Q9P1A6 1054 aa15.67■□□□□ 0.1
CXCL12-208ENST00000496375 LARSQ9P2J5 1176 aaKnown RBP15.67■□□□□ 0.1
CXCL12-208ENST00000496375 CCDC39Q9UFE4 941 aa15.67■□□□□ 0.1
CXCL12-208ENST00000496375 TUBGCP4Q9UGJ1 667 aa15.67■□□□□ 0.1
CXCL12-208ENST00000496375 PCDHA7Q9UN72 937 aa15.67■□□□□ 0.1
CXCL12-208ENST00000496375 WDR87Q6ZQQ6 2873 aa15.67■□□□□ 0.1
CXCL12-208ENST00000496375 H0YCG3 227 aa15.66■□□□□ 0.1
CXCL12-208ENST00000496375 SEC24AO95486 1093 aa15.66■□□□□ 0.1
CXCL12-208ENST00000496375 CXCL8P10145 99 aa15.66■□□□□ 0.1
CXCL12-208ENST00000496375 ATF2P15336 505 aa15.66■□□□□ 0.1
CXCL12-208ENST00000496375 PTPN2P17706 415 aa15.66■□□□□ 0.1
CXCL12-208ENST00000496375 NCKAP1LP55160 1127 aa15.66■□□□□ 0.1
CXCL12-208ENST00000496375 SPAG1Q07617 926 aa15.66■□□□□ 0.1
CXCL12-208ENST00000496375 SNW1Q13573 536 aaKnown RBP15.66■□□□□ 0.1
CXCL12-208ENST00000496375 MLF2Q15773 248 aaPredicted RBP15.66■□□□□ 0.1
CXCL12-208ENST00000496375 FOXD4L6Q3SYB3 417 aaPredicted RBP15.66■□□□□ 0.1
CXCL12-208ENST00000496375 CTXN3Q4LDR2 81 aa15.66■□□□□ 0.1
CXCL12-208ENST00000496375 FOXD4L3Q6VB84 417 aaPredicted RBP15.66■□□□□ 0.1
CXCL12-208ENST00000496375 TMEM130Q8N3G9 435 aa15.66■□□□□ 0.1
CXCL12-208ENST00000496375 LARP4BQ92615 738 aaKnown RBP15.66■□□□□ 0.1
CXCL12-208ENST00000496375 DDX12PQ92771 950 aa15.66■□□□□ 0.1
CXCL12-208ENST00000496375 MCRS1Q96EZ8 462 aa15.66■□□□□ 0.1
CXCL12-208ENST00000496375 SHDQ96IW2 340 aa15.66■□□□□ 0.1
CXCL12-208ENST00000496375 CORO1BQ9BR76 489 aa15.66■□□□□ 0.1
CXCL12-208ENST00000496375 HAPLN2Q9GZV7 340 aa15.66■□□□□ 0.1
CXCL12-208ENST00000496375 COL4A3Q01955 1670 aa15.66■□□□□ 0.1
CXCL12-208ENST00000496375 MIA3Q5JRA6 1907 aa15.65■□□□□ 0.1
CXCL12-208ENST00000496375 A0A087X0B3 334 aa15.65■□□□□ 0.1
CXCL12-208ENST00000496375 LRRN2O75325 713 aa15.65■□□□□ 0.1
CXCL12-208ENST00000496375 CLTAP09496 248 aa15.65■□□□□ 0.1
CXCL12-208ENST00000496375 GLULP15104 373 aa15.65■□□□□ 0.1
CXCL12-208ENST00000496375 CEBPBP17676 345 aa15.65■□□□□ 0.1
CXCL12-208ENST00000496375 E2F4Q16254 413 aa15.65■□□□□ 0.1
CXCL12-208ENST00000496375 SLC44A4Q53GD3 710 aa15.65■□□□□ 0.1
CXCL12-208ENST00000496375 RESP18Q5W5W9 173 aa15.65■□□□□ 0.1
CXCL12-208ENST00000496375 ZNF280DQ6N043 979 aa15.65■□□□□ 0.1
CXCL12-208ENST00000496375 CCDC73Q6ZRK6 1079 aa15.65■□□□□ 0.1
CXCL12-208ENST00000496375 HAUS6Q7Z4H7 955 aa15.65■□□□□ 0.1
CXCL12-208ENST00000496375 GPBP1Q86WP2 473 aa15.65■□□□□ 0.1
CXCL12-208ENST00000496375 TCEAL8Q8IYN2 117 aa15.65■□□□□ 0.1
CXCL12-208ENST00000496375 ADSSL1Q8N142 457 aa15.65■□□□□ 0.1
CXCL12-208ENST00000496375 APPL2Q8NEU8 664 aa15.65■□□□□ 0.1
CXCL12-208ENST00000496375 KIF12Q96FN5 646 aa15.65■□□□□ 0.1
CXCL12-208ENST00000496375 SPATA32Q96LK8 384 aa15.65■□□□□ 0.1
CXCL12-208ENST00000496375 REEP2Q9BRK0 252 aa15.65■□□□□ 0.1
CXCL12-208ENST00000496375 PLEKHA5Q9HAU0 1116 aa15.65■□□□□ 0.1
CXCL12-208ENST00000496375 AVENQ9NQS1 362 aaPredicted RBP15.65■□□□□ 0.1
CXCL12-208ENST00000496375 GDE1Q9NZC3 331 aa15.65■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms