RNA–Protein interactions for RNA: ENST00000494654.1

MDC1-208, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 3

Gene MDC1, Length 148 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-208ENST00000494654 SCN8AQ9UQD0 1980 aa2.9□□□□□ -1.95
MDC1-208ENST00000494654 TNS1Q9HBL0 1735 aaKnown RBP2.9□□□□□ -1.95
MDC1-208ENST00000494654 ANK1P16157 1881 aa2.9□□□□□ -1.95
MDC1-208ENST00000494654 PFASO15067 1338 aa2.9□□□□□ -1.95
MDC1-208ENST00000494654 RPTORQ8N122 1335 aa2.9□□□□□ -1.95
MDC1-208ENST00000494654 ANKRD36A6QL64 1941 aa2.89□□□□□ -1.95
MDC1-208ENST00000494654 MTCL1Q9Y4B5 1905 aaKnown RBP2.89□□□□□ -1.95
MDC1-208ENST00000494654 ZNF646O15015 1829 aaPredicted RBP2.89□□□□□ -1.95
MDC1-208ENST00000494654 hCG_2014768A0A024R1R8 64 aa2.89□□□□□ -1.95
MDC1-208ENST00000494654 A0A088AWK7 358 aa2.89□□□□□ -1.95
MDC1-208ENST00000494654 C15orf38-AP3S2A0A0A6YYH1 394 aa2.89□□□□□ -1.95
MDC1-208ENST00000494654 A0A0G2JLW4 131 aa2.89□□□□□ -1.95
MDC1-208ENST00000494654 TMEM120BA0PK00 339 aa2.89□□□□□ -1.95
MDC1-208ENST00000494654 ARHGAP10A1A4S6 786 aa2.89□□□□□ -1.95
MDC1-208ENST00000494654 SH3PXD2BA1X283 911 aa2.89□□□□□ -1.95
MDC1-208ENST00000494654 PI4KAP2A4QPH2 592 aa2.89□□□□□ -1.95
MDC1-208ENST00000494654 A6NJY4 79 aa2.89□□□□□ -1.95
MDC1-208ENST00000494654 TRIM75PA6NK02 468 aa2.89□□□□□ -1.95
MDC1-208ENST00000494654 BTBD18B2RXH4 712 aa2.89□□□□□ -1.95
MDC1-208ENST00000494654 TMEM114B3SHH9 223 aa2.89□□□□□ -1.95
MDC1-208ENST00000494654 TCP11X1B4DZS4 312 aa2.89□□□□□ -1.95
MDC1-208ENST00000494654 SPECC1L-ADORA2AF8WAN1 911 aa2.89□□□□□ -1.95
MDC1-208ENST00000494654 H3BM21 787 aa2.89□□□□□ -1.95
MDC1-208ENST00000494654 EIF3FO00303 357 aaPredicted RBP2.89□□□□□ -1.95
MDC1-208ENST00000494654 WASLO00401 505 aaPredicted RBP2.89□□□□□ -1.95
MDC1-208ENST00000494654 DDX3XO00571 662 aaKnown RBP eCLIP2.89□□□□□ -1.95
MDC1-208ENST00000494654 FBP2O00757 339 aa2.89□□□□□ -1.95
MDC1-208ENST00000494654 KCNK3O14649 394 aa2.89□□□□□ -1.95
MDC1-208ENST00000494654 CAPN9O14815 690 aa2.89□□□□□ -1.95
MDC1-208ENST00000494654 MAPK13O15264 365 aa2.89□□□□□ -1.95
MDC1-208ENST00000494654 FOXP2O15409 715 aa2.89□□□□□ -1.95
MDC1-208ENST00000494654 MAGEB2O15479 319 aa2.89□□□□□ -1.95
MDC1-208ENST00000494654 RNF113AO15541 343 aaKnown RBP2.89□□□□□ -1.95
MDC1-208ENST00000494654 DAPK3O43293 454 aa2.89□□□□□ -1.95
MDC1-208ENST00000494654 RIPK2O43353 540 aa2.89□□□□□ -1.95
MDC1-208ENST00000494654 KCNQ2O43526 872 aa2.89□□□□□ -1.95
MDC1-208ENST00000494654 BUB1O43683 1085 aa2.89□□□□□ -1.95
MDC1-208ENST00000494654 BUD23O43709 281 aaKnown RBP2.89□□□□□ -1.95
MDC1-208ENST00000494654 KLRC4O43908 158 aa2.89□□□□□ -1.95
MDC1-208ENST00000494654 ADCY3O60266 1144 aa2.89□□□□□ -1.95
MDC1-208ENST00000494654 KDM1AO60341 852 aa2.89□□□□□ -1.95
MDC1-208ENST00000494654 MGEA5O60502 916 aa2.89□□□□□ -1.95
MDC1-208ENST00000494654 EXOC3O60645 756 aa2.89□□□□□ -1.95
MDC1-208ENST00000494654 CCDC22O60826 627 aa2.89□□□□□ -1.95
MDC1-208ENST00000494654 RNASEH1O60930 286 aaKnown RBP2.89□□□□□ -1.95
MDC1-208ENST00000494654 PHF2O75151 1096 aa2.89□□□□□ -1.95
MDC1-208ENST00000494654 TBX10O75333 385 aa2.89□□□□□ -1.95
MDC1-208ENST00000494654 FKBP6O75344 327 aa2.89□□□□□ -1.95
MDC1-208ENST00000494654 ENTPD5O75356 428 aa2.89□□□□□ -1.95
MDC1-208ENST00000494654 CSDE1O75534 798 aaKnown RBP2.89□□□□□ -1.95
MDC1-208ENST00000494654 STK10O94804 968 aaKnown RBP2.89□□□□□ -1.95
MDC1-208ENST00000494654 BAIAP3O94812 1187 aa2.89□□□□□ -1.95
MDC1-208ENST00000494654 HAUS5O94927 633 aa2.89□□□□□ -1.95
MDC1-208ENST00000494654 DDX58O95786 925 aaKnown RBP2.89□□□□□ -1.95
MDC1-208ENST00000494654 FTCDO95954 541 aa2.89□□□□□ -1.95
MDC1-208ENST00000494654 GAS8O95995 478 aa2.89□□□□□ -1.95
MDC1-208ENST00000494654 SERPING1P05155 500 aa2.89□□□□□ -1.95
MDC1-208ENST00000494654 PLEKP08567 350 aaPredicted RBP2.89□□□□□ -1.95
MDC1-208ENST00000494654 CDK4P11802 303 aa2.89□□□□□ -1.95
MDC1-208ENST00000494654 RARGP13631 454 aa2.89□□□□□ -1.95
MDC1-208ENST00000494654 XBP1P17861 261 aa2.89□□□□□ -1.95
MDC1-208ENST00000494654 FBLN1P23142 703 aa2.89□□□□□ -1.95
MDC1-208ENST00000494654 COL5A3P25940 1745 aaPredicted RBP2.89□□□□□ -1.95
MDC1-208ENST00000494654 KLRC1P26715 233 aa2.89□□□□□ -1.95
MDC1-208ENST00000494654 STX2P32856 288 aa2.89□□□□□ -1.95
MDC1-208ENST00000494654 PHBP35232 272 aa2.89□□□□□ -1.95
MDC1-208ENST00000494654 KRT2P35908 639 aa2.89□□□□□ -1.95
MDC1-208ENST00000494654 GMPRP36959 345 aa2.89□□□□□ -1.95
MDC1-208ENST00000494654 CCNFP41002 786 aa2.89□□□□□ -1.95
MDC1-208ENST00000494654 PRCPP42785 496 aa2.89□□□□□ -1.95
MDC1-208ENST00000494654 MTIF2P46199 727 aaKnown RBP2.89□□□□□ -1.95
MDC1-208ENST00000494654 RFX5P48382 616 aaPredicted RBP2.89□□□□□ -1.95
MDC1-208ENST00000494654 TRAPPC10P48553 1259 aa2.89□□□□□ -1.95
MDC1-208ENST00000494654 GALK1P51570 392 aa2.89□□□□□ -1.95
MDC1-208ENST00000494654 NEK3P51956 506 aa2.89□□□□□ -1.95
MDC1-208ENST00000494654 RAP1GDS1P52306 607 aa2.89□□□□□ -1.95
MDC1-208ENST00000494654 SLC18A1P54219 525 aa2.89□□□□□ -1.95
MDC1-208ENST00000494654 DRG2P55039 364 aaKnown RBP2.89□□□□□ -1.95
MDC1-208ENST00000494654 EIF4A1P60842 406 aaKnown RBP2.89□□□□□ -1.95
MDC1-208ENST00000494654 AP2B1P63010 937 aa2.89□□□□□ -1.95
MDC1-208ENST00000494654 IRX4P78413 519 aa2.89□□□□□ -1.95
MDC1-208ENST00000494654 RELAQ04206 551 aa2.89□□□□□ -1.95
MDC1-208ENST00000494654 SSRP1Q08945 709 aaKnown RBP2.89□□□□□ -1.95
MDC1-208ENST00000494654 NSUN2Q08J23 767 aaKnown RBP eCLIP2.89□□□□□ -1.95
MDC1-208ENST00000494654 TBL3Q12788 808 aaKnown RBP2.89□□□□□ -1.95
MDC1-208ENST00000494654 KCNMA1Q12791 1236 aa2.89□□□□□ -1.95
MDC1-208ENST00000494654 ASPHQ12797 758 aa2.89□□□□□ -1.95
MDC1-208ENST00000494654 AUHQ13825 339 aaKnown RBP2.89□□□□□ -1.95
MDC1-208ENST00000494654 GRIN2CQ14957 1233 aa2.89□□□□□ -1.95
MDC1-208ENST00000494654 RPS6KA1Q15418 735 aa2.89□□□□□ -1.95
MDC1-208ENST00000494654 TRADDQ15628 312 aa2.89□□□□□ -1.95
MDC1-208ENST00000494654 CHRNA2Q15822 529 aa2.89□□□□□ -1.95
MDC1-208ENST00000494654 CNGA3Q16281 694 aa2.89□□□□□ -1.95
MDC1-208ENST00000494654 GPR162Q16538 588 aa2.89□□□□□ -1.95
MDC1-208ENST00000494654 SLC18A3Q16572 532 aa2.89□□□□□ -1.95
MDC1-208ENST00000494654 KYNUQ16719 465 aa2.89□□□□□ -1.95
MDC1-208ENST00000494654 TRIM71Q2Q1W2 868 aaKnown RBP2.89□□□□□ -1.95
MDC1-208ENST00000494654 ZNF800Q2TB10 664 aaPredicted RBP eCLIP2.89□□□□□ -1.95
MDC1-208ENST00000494654 TRMT5Q32P41 509 aaKnown RBP2.89□□□□□ -1.95
MDC1-208ENST00000494654 RABL6Q3YEC7 729 aaPredicted RBP2.89□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms