RNA–Protein interactions for RNA: ENST00000493940.2

HSPG2-212, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 5

Gene HSPG2, Length 584 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-212ENST00000493940 FAM212AQ96EL1 285 aa13.73□□□□□ -0.21
HSPG2-212ENST00000493940 KIF12Q96FN5 646 aa13.73□□□□□ -0.21
HSPG2-212ENST00000493940 SUSD3Q96L08 255 aa13.73□□□□□ -0.21
HSPG2-212ENST00000493940 PRRX2Q99811 253 aa13.73□□□□□ -0.21
HSPG2-212ENST00000493940 MSTO1Q9BUK6 570 aa13.73□□□□□ -0.21
HSPG2-212ENST00000493940 RPP25Q9BUL9 199 aaKnown RBP13.73□□□□□ -0.21
HSPG2-212ENST00000493940 PLEKHA5Q9HAU0 1116 aa13.73□□□□□ -0.21
HSPG2-212ENST00000493940 KCNK12Q9HB15 430 aa13.73□□□□□ -0.21
HSPG2-212ENST00000493940 SLC38A7Q9NVC3 462 aa13.73□□□□□ -0.21
HSPG2-212ENST00000493940 PCDHA7Q9UN72 937 aa13.73□□□□□ -0.21
HSPG2-212ENST00000493940 BACE2Q9Y5Z0 518 aa13.73□□□□□ -0.21
HSPG2-212ENST00000493940 ABLIM3O94929 683 aa13.72□□□□□ -0.21
HSPG2-212ENST00000493940 YEATS4O95619 227 aa13.72□□□□□ -0.21
HSPG2-212ENST00000493940 PTPN5P54829 565 aa13.72□□□□□ -0.21
HSPG2-212ENST00000493940 VCPP55072 806 aaKnown RBP13.72□□□□□ -0.21
HSPG2-212ENST00000493940 DNM1Q05193 864 aaKnown RBP13.72□□□□□ -0.21
HSPG2-212ENST00000493940 SPATA1Q5VX52 437 aa13.72□□□□□ -0.21
HSPG2-212ENST00000493940 SLC8B1Q6J4K2 584 aa13.72□□□□□ -0.21
HSPG2-212ENST00000493940 CCDC73Q6ZRK6 1079 aa13.72□□□□□ -0.21
HSPG2-212ENST00000493940 EFCAB13Q8IY85 973 aa13.72□□□□□ -0.21
HSPG2-212ENST00000493940 ITFG1Q8TB96 612 aa13.72□□□□□ -0.21
HSPG2-212ENST00000493940 SLC7A14Q8TBB6 771 aa13.72□□□□□ -0.21
HSPG2-212ENST00000493940 MRPL44Q9H9J2 332 aaKnown RBP13.72□□□□□ -0.21
HSPG2-212ENST00000493940 RPF1Q9H9Y2 349 aaKnown RBP13.72□□□□□ -0.21
HSPG2-212ENST00000493940 KBTBD4Q9NVX7 518 aa13.72□□□□□ -0.21
HSPG2-212ENST00000493940 ZDHHC7Q9NXF8 308 aa13.72□□□□□ -0.21
HSPG2-212ENST00000493940 DNMT3BQ9UBC3 853 aaKnown RBP13.72□□□□□ -0.21
HSPG2-212ENST00000493940 FBXL5Q9UKA1 691 aa13.72□□□□□ -0.21
HSPG2-212ENST00000493940 SORCS3Q9UPU3 1222 aa13.72□□□□□ -0.21
HSPG2-212ENST00000493940 OBSL1O75147 1896 aa13.72□□□□□ -0.21
HSPG2-212ENST00000493940 USP34Q70CQ2 3546 aa13.71□□□□□ -0.21
HSPG2-212ENST00000493940 M0QZQ0 153 aa13.71□□□□□ -0.21
HSPG2-212ENST00000493940 CUTAO60888 179 aa13.71□□□□□ -0.21
HSPG2-212ENST00000493940 PRPF6O94906 941 aaKnown RBP13.71□□□□□ -0.21
HSPG2-212ENST00000493940 IDEP14735 1019 aa13.71□□□□□ -0.21
HSPG2-212ENST00000493940 AARSP49588 968 aaKnown RBP eCLIP13.71□□□□□ -0.21
HSPG2-212ENST00000493940 CDR1P51861 262 aa13.71□□□□□ -0.21
HSPG2-212ENST00000493940 ARPP19P56211 112 aa13.71□□□□□ -0.21
HSPG2-212ENST00000493940 CREMQ03060 361 aa13.71□□□□□ -0.21
HSPG2-212ENST00000493940 L1TD1Q5T7N2 865 aaKnown RBP13.71□□□□□ -0.21
HSPG2-212ENST00000493940 ADALQ6DHV7 355 aa13.71□□□□□ -0.21
HSPG2-212ENST00000493940 ANKS3Q6ZW76 656 aa13.71□□□□□ -0.21
HSPG2-212ENST00000493940 DHX58Q96C10 678 aa13.71□□□□□ -0.21
HSPG2-212ENST00000493940 SAAL1Q96ER3 474 aa13.71□□□□□ -0.21
HSPG2-212ENST00000493940 ZNF396Q96N95 335 aaPredicted RBP13.71□□□□□ -0.21
HSPG2-212ENST00000493940 TMEM209Q96SK2 561 aa13.71□□□□□ -0.21
HSPG2-212ENST00000493940 PHOX2BQ99453 314 aa13.71□□□□□ -0.21
HSPG2-212ENST00000493940 CRISPLD1Q9H336 500 aa13.71□□□□□ -0.21
HSPG2-212ENST00000493940 PANK4Q9NVE7 773 aa13.71□□□□□ -0.21
HSPG2-212ENST00000493940 AGO2Q9UKV8 859 aaKnown RBP13.71□□□□□ -0.21
HSPG2-212ENST00000493940 VPS13AQ96RL7 3174 aa13.71□□□□□ -0.21
HSPG2-212ENST00000493940 KIF26AQ9ULI4 1882 aaPredicted RBP13.71□□□□□ -0.21
HSPG2-212ENST00000493940 CACNA1HO95180 2353 aa13.71□□□□□ -0.22
HSPG2-212ENST00000493940 ZNF638Q14966 1978 aaKnown RBP13.71□□□□□ -0.22
HSPG2-212ENST00000493940 GREB1Q4ZG55 1949 aa13.7□□□□□ -0.22
HSPG2-212ENST00000493940 ANO9A1A5B4 782 aa13.7□□□□□ -0.22
HSPG2-212ENST00000493940 GOLGA8IPA6NC78 632 aa13.7□□□□□ -0.22
HSPG2-212ENST00000493940 GOLGA8JA6NMD2 632 aa13.7□□□□□ -0.22
HSPG2-212ENST00000493940 PIRO00625 290 aa13.7□□□□□ -0.22
HSPG2-212ENST00000493940 SYN3O14994 580 aa13.7□□□□□ -0.22
HSPG2-212ENST00000493940 TRAPPC3O43617 180 aa13.7□□□□□ -0.22
HSPG2-212ENST00000493940 OR4Q2P0C623 313 aa13.7□□□□□ -0.22
HSPG2-212ENST00000493940 CYP3A5P20815 502 aa13.7□□□□□ -0.22
HSPG2-212ENST00000493940 GBP2P32456 591 aaPredicted RBP13.7□□□□□ -0.22
HSPG2-212ENST00000493940 MCM4P33991 863 aa13.7□□□□□ -0.22
HSPG2-212ENST00000493940 PPP2R3AQ06190 1150 aa13.7□□□□□ -0.22
HSPG2-212ENST00000493940 SLC5A9Q2M3M2 681 aa13.7□□□□□ -0.22
HSPG2-212ENST00000493940 PPM1LQ5SGD2 360 aa13.7□□□□□ -0.22
HSPG2-212ENST00000493940 CYP26C1Q6V0L0 522 aa13.7□□□□□ -0.22
HSPG2-212ENST00000493940 RNF19BQ6ZMZ0 732 aa13.7□□□□□ -0.22
HSPG2-212ENST00000493940 OTOP3Q7RTS5 596 aa13.7□□□□□ -0.22
HSPG2-212ENST00000493940 SUGP1Q8IWZ8 645 aaKnown RBP13.7□□□□□ -0.22
HSPG2-212ENST00000493940 GRAMD1CQ8IYS0 662 aa13.7□□□□□ -0.22
HSPG2-212ENST00000493940 PLCD3Q8N3E9 789 aa13.7□□□□□ -0.22
HSPG2-212ENST00000493940 FBXL6Q8N531 539 aa13.7□□□□□ -0.22
HSPG2-212ENST00000493940 ZNF461Q8TAF7 563 aa13.7□□□□□ -0.22
HSPG2-212ENST00000493940 ACSF2Q96CM8 615 aaPredicted RBP13.7□□□□□ -0.22
HSPG2-212ENST00000493940 BORCS6Q96GS4 357 aa13.7□□□□□ -0.22
HSPG2-212ENST00000493940 CBWD1Q9BRT8 395 aa13.7□□□□□ -0.22
HSPG2-212ENST00000493940 PCIF1Q9H4Z3 704 aa13.7□□□□□ -0.22
HSPG2-212ENST00000493940 PIDD1Q9HB75 910 aa13.7□□□□□ -0.22
HSPG2-212ENST00000493940 OLFML3Q9NRN5 406 aa13.7□□□□□ -0.22
HSPG2-212ENST00000493940 EPS15L1Q9UBC2 864 aa13.7□□□□□ -0.22
HSPG2-212ENST00000493940 SEL1LQ9UBV2 794 aa13.7□□□□□ -0.22
HSPG2-212ENST00000493940 RCOR1Q9UKL0 485 aa13.7□□□□□ -0.22
HSPG2-212ENST00000493940 UBQLN1Q9UMX0 589 aaKnown RBP13.7□□□□□ -0.22
HSPG2-212ENST00000493940 PCDHB8Q9UN66 801 aa13.7□□□□□ -0.22
HSPG2-212ENST00000493940 NUB1Q9Y5A7 615 aa13.7□□□□□ -0.22
HSPG2-212ENST00000493940 CACNA1IQ9P0X4 2223 aa13.7□□□□□ -0.22
HSPG2-212ENST00000493940 MIA3Q5JRA6 1907 aa13.69□□□□□ -0.22
HSPG2-212ENST00000493940 POLR2DO15514 142 aaKnown RBP13.69□□□□□ -0.22
HSPG2-212ENST00000493940 GCNT3O95395 438 aa13.69□□□□□ -0.22
HSPG2-212ENST00000493940 LAMP2P13473 410 aa13.69□□□□□ -0.22
HSPG2-212ENST00000493940 NPR3P17342 541 aa13.69□□□□□ -0.22
HSPG2-212ENST00000493940 GAP43P17677 238 aa13.69□□□□□ -0.22
HSPG2-212ENST00000493940 TXLNAP40222 546 aa13.69□□□□□ -0.22
HSPG2-212ENST00000493940 LILRA4P59901 499 aa13.69□□□□□ -0.22
HSPG2-212ENST00000493940 TCF15Q12870 199 aa13.69□□□□□ -0.22
HSPG2-212ENST00000493940 MTMR3Q13615 1198 aa13.69□□□□□ -0.22
HSPG2-212ENST00000493940 CTXN3Q4LDR2 81 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms