RNA–Protein interactions for RNA: ENST00000491402.5

VCPKMT-204, Transcript of valosin containing protein lysine methyltransferase, humanhuman

TSL 1 (best)

Gene VCPKMT, Length 1,793 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCPKMT-204ENST00000491402 URGCPQ8TCY9 931 aa23.41■■□□□ 1.34
VCPKMT-204ENST00000491402 TOP1MTQ969P6 601 aa23.41■■□□□ 1.34
VCPKMT-204ENST00000491402 ELMO3Q96BJ8 720 aa23.41■■□□□ 1.34
VCPKMT-204ENST00000491402 NUP58Q9BVL2 599 aa23.41■■□□□ 1.34
VCPKMT-204ENST00000491402 IMPG2Q9BZV3 1241 aa23.41■■□□□ 1.34
VCPKMT-204ENST00000491402 GANQ9H2C0 597 aa23.41■■□□□ 1.34
VCPKMT-204ENST00000491402 APEX2Q9UBZ4 518 aa23.41■■□□□ 1.34
VCPKMT-204ENST00000491402 ZC3H11AO75152 810 aaKnown RBP eCLIP23.4■■□□□ 1.34
VCPKMT-204ENST00000491402 ASS1P00966 412 aaKnown RBP23.4■■□□□ 1.34
VCPKMT-204ENST00000491402 CCDC173Q0VFZ6 552 aa23.4■■□□□ 1.34
VCPKMT-204ENST00000491402 LRMPQ12912 555 aa23.4■■□□□ 1.34
VCPKMT-204ENST00000491402 TBX2Q13207 712 aaPredicted RBP23.4■■□□□ 1.34
VCPKMT-204ENST00000491402 KLHDC7AQ5VTJ3 777 aa23.4■■□□□ 1.34
VCPKMT-204ENST00000491402 XYLT2Q9H1B5 865 aa23.4■■□□□ 1.34
VCPKMT-204ENST00000491402 AGAP1Q9UPQ3 857 aa23.4■■□□□ 1.34
VCPKMT-204ENST00000491402 GTF3C5Q9Y5Q8 519 aaPredicted RBP23.4■■□□□ 1.34
VCPKMT-204ENST00000491402 UCHL3P15374 230 aa23.4■■□□□ 1.34
VCPKMT-204ENST00000491402 ATP2A2P16615 1042 aaKnown RBP23.4■■□□□ 1.34
VCPKMT-204ENST00000491402 GATMP50440 423 aa23.4■■□□□ 1.34
VCPKMT-204ENST00000491402 NOP14P78316 857 aaKnown RBP23.4■■□□□ 1.34
VCPKMT-204ENST00000491402 RBP5P82980 135 aa23.4■■□□□ 1.34
VCPKMT-204ENST00000491402 TRIM14Q14142 442 aa23.4■■□□□ 1.34
VCPKMT-204ENST00000491402 SGSM1Q2NKQ1 1148 aa23.4■■□□□ 1.34
VCPKMT-204ENST00000491402 WDR44Q5JSH3 913 aa23.4■■□□□ 1.34
VCPKMT-204ENST00000491402 C9orf57Q5W0N0 161 aa23.4■■□□□ 1.34
VCPKMT-204ENST00000491402 PHLDB3Q6NSJ2 640 aa23.4■■□□□ 1.34
VCPKMT-204ENST00000491402 NT5C1BQ96P26 610 aa23.4■■□□□ 1.34
VCPKMT-204ENST00000491402 CASD1Q96PB1 797 aa23.4■■□□□ 1.34
VCPKMT-204ENST00000491402 KANSL3Q9P2N6 904 aa23.4■■□□□ 1.34
VCPKMT-204ENST00000491402 IMPACTQ9P2X3 320 aa23.4■■□□□ 1.34
VCPKMT-204ENST00000491402 TRIOBPQ9H2D6 2365 aa23.39■■□□□ 1.34
VCPKMT-204ENST00000491402 ANO9A1A5B4 782 aa23.39■■□□□ 1.33
VCPKMT-204ENST00000491402 LRPAP1P30533 357 aa23.39■■□□□ 1.33
VCPKMT-204ENST00000491402 FAM109BQ6ICB4 259 aaPredicted RBP23.39■■□□□ 1.33
VCPKMT-204ENST00000491402 SPOPLQ6IQ16 392 aa23.39■■□□□ 1.33
VCPKMT-204ENST00000491402 CCDC150Q8NCX0 1101 aa23.39■■□□□ 1.33
VCPKMT-204ENST00000491402 IQCDQ96DY2 449 aa23.39■■□□□ 1.33
VCPKMT-204ENST00000491402 TBC1D13Q9NVG8 400 aa23.39■■□□□ 1.33
VCPKMT-204ENST00000491402 R3HCC1Q9Y3T6 440 aaKnown RBP23.39■■□□□ 1.33
VCPKMT-204ENST00000491402 GRXCR1A8MXD5 290 aa23.38■■□□□ 1.33
VCPKMT-204ENST00000491402 PPEF2O14830 753 aa23.38■■□□□ 1.33
VCPKMT-204ENST00000491402 CLSTN1O94985 981 aa23.38■■□□□ 1.33
VCPKMT-204ENST00000491402 POLR2FP61218 127 aaKnown RBP23.38■■□□□ 1.33
VCPKMT-204ENST00000491402 ZNF699Q32M78 642 aa23.38■■□□□ 1.33
VCPKMT-204ENST00000491402 GJB7Q6PEY0 223 aa23.38■■□□□ 1.33
VCPKMT-204ENST00000491402 PPFIBP1Q86W92 1011 aa23.38■■□□□ 1.33
VCPKMT-204ENST00000491402 ARHGEF19Q8IW93 802 aa23.38■■□□□ 1.33
VCPKMT-204ENST00000491402 PHOSPHO2Q8TCD6 241 aa23.38■■□□□ 1.33
VCPKMT-204ENST00000491402 RSPH1Q8WYR4 309 aa23.38■■□□□ 1.33
VCPKMT-204ENST00000491402 SLC9A7Q96T83 725 aa23.38■■□□□ 1.33
VCPKMT-204ENST00000491402 APOBEC3GQ9HC16 384 aaKnown RBP23.38■■□□□ 1.33
VCPKMT-204ENST00000491402 CEP72Q9P209 647 aa23.38■■□□□ 1.33
VCPKMT-204ENST00000491402 CACNG4Q9UBN1 327 aa23.38■■□□□ 1.33
VCPKMT-204ENST00000491402 FBXL5Q9UKA1 691 aa23.38■■□□□ 1.33
VCPKMT-204ENST00000491402 FHOD1Q9Y613 1164 aa23.38■■□□□ 1.33
VCPKMT-204ENST00000491402 COL4A6Q14031 1691 aa23.38■■□□□ 1.33
VCPKMT-204ENST00000491402 LAMA3Q16787 3333 aa23.38■■□□□ 1.33
VCPKMT-204ENST00000491402 PIRO00625 290 aa23.37■■□□□ 1.33
VCPKMT-204ENST00000491402 DGKIO75912 1065 aa23.37■■□□□ 1.33
VCPKMT-204ENST00000491402 ATICP31939 592 aa23.37■■□□□ 1.33
VCPKMT-204ENST00000491402 CASP14P31944 242 aa23.37■■□□□ 1.33
VCPKMT-204ENST00000491402 FXR1P51114 621 aaKnown RBP eCLIP23.37■■□□□ 1.33
VCPKMT-204ENST00000491402 TUSC3Q13454 348 aa23.37■■□□□ 1.33
VCPKMT-204ENST00000491402 HERC6Q8IVU3 1022 aa23.37■■□□□ 1.33
VCPKMT-204ENST00000491402 PPM1KQ8N3J5 372 aa23.37■■□□□ 1.33
VCPKMT-204ENST00000491402 CPLX3Q8WVH0 158 aa23.37■■□□□ 1.33
VCPKMT-204ENST00000491402 TAF4BQ92750 862 aa23.37■■□□□ 1.33
VCPKMT-204ENST00000491402 TATDN2Q93075 761 aa23.37■■□□□ 1.33
VCPKMT-204ENST00000491402 HPDLQ96IR7 371 aa23.37■■□□□ 1.33
VCPKMT-204ENST00000491402 CASTOR2A6NHX0 329 aa23.37■■□□□ 1.33
VCPKMT-204ENST00000491402 RFX1P22670 979 aa23.37■■□□□ 1.33
VCPKMT-204ENST00000491402 RNASELQ05823 741 aaKnown RBP23.37■■□□□ 1.33
VCPKMT-204ENST00000491402 DSC1Q08554 894 aa23.37■■□□□ 1.33
VCPKMT-204ENST00000491402 LRRC52Q8N7C0 313 aa23.37■■□□□ 1.33
VCPKMT-204ENST00000491402 PPP1R9BQ96SB3 815 aa23.37■■□□□ 1.33
VCPKMT-204ENST00000491402 ZBED2Q9BTP6 218 aa23.37■■□□□ 1.33
VCPKMT-204ENST00000491402 VRTNQ9H8Y1 702 aa23.37■■□□□ 1.33
VCPKMT-204ENST00000491402 NLRC4Q9NPP4 1024 aa23.37■■□□□ 1.33
VCPKMT-204ENST00000491402 AJAP1Q9UKB5 411 aaPredicted RBP23.37■■□□□ 1.33
VCPKMT-204ENST00000491402 CAPN11Q9UMQ6 739 aa23.37■■□□□ 1.33
VCPKMT-204ENST00000491402 NUB1Q9Y5A7 615 aa23.37■■□□□ 1.33
VCPKMT-204ENST00000491402 A0A1W2PQJ5 194 aa23.36■■□□□ 1.33
VCPKMT-204ENST00000491402 TBKBP1A7MCY6 615 aa23.36■■□□□ 1.33
VCPKMT-204ENST00000491402 GOLGA6L6A8MZA4 724 aa23.36■■□□□ 1.33
VCPKMT-204ENST00000491402 RNF225M0QZC1 329 aaPredicted RBP23.36■■□□□ 1.33
VCPKMT-204ENST00000491402 TPM1P09493 284 aa23.36■■□□□ 1.33
VCPKMT-204ENST00000491402 CLCNKBP51801 687 aa23.36■■□□□ 1.33
VCPKMT-204ENST00000491402 IQCEQ6IPM2 695 aa23.36■■□□□ 1.33
VCPKMT-204ENST00000491402 RRAGAQ7L523 313 aa23.36■■□□□ 1.33
VCPKMT-204ENST00000491402 CACNA2D4Q7Z3S7 1137 aa23.36■■□□□ 1.33
VCPKMT-204ENST00000491402 ZNF280BQ86YH2 543 aa23.36■■□□□ 1.33
VCPKMT-204ENST00000491402 PAAF1Q9BRP4 392 aa23.36■■□□□ 1.33
VCPKMT-204ENST00000491402 NAA15Q9BXJ9 866 aaKnown RBP23.36■■□□□ 1.33
VCPKMT-204ENST00000491402 MRPL9Q9BYD2 267 aaKnown RBP23.36■■□□□ 1.33
VCPKMT-204ENST00000491402 UBE2TQ9NPD8 197 aaPredicted RBP23.36■■□□□ 1.33
VCPKMT-204ENST00000491402 DNAJC12Q9UKB3 198 aa23.36■■□□□ 1.33
VCPKMT-204ENST00000491402 DAAM1Q9Y4D1 1078 aa23.36■■□□□ 1.33
VCPKMT-204ENST00000491402 B4GALT3O60512 393 aa23.35■■□□□ 1.33
VCPKMT-204ENST00000491402 DDHD2O94830 711 aa23.35■■□□□ 1.33
VCPKMT-204ENST00000491402 GJB5O95377 273 aa23.35■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms