RNA–Protein interactions for RNA: ENST00000491165.5

USF3-203, Transcript of upstream transcription factor family member 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene USF3, Length 2,133 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF3-203ENST00000491165 PDZD7Q9H5P4 517 aa24.45■■□□□ 1.5
USF3-203ENST00000491165 HSPBP1Q9NZL4 362 aa24.45■■□□□ 1.5
USF3-203ENST00000491165 RSPH14Q9UHP6 348 aa24.45■■□□□ 1.5
USF3-203ENST00000491165 GOLGA8IPA6NC78 632 aa24.44■■□□□ 1.5
USF3-203ENST00000491165 GOLGA8JA6NMD2 632 aa24.44■■□□□ 1.5
USF3-203ENST00000491165 DCDC2CA8MYV0 355 aa24.44■■□□□ 1.5
USF3-203ENST00000491165 CETN3O15182 167 aa24.44■■□□□ 1.5
USF3-203ENST00000491165 TOM1L1O75674 476 aa24.44■■□□□ 1.5
USF3-203ENST00000491165 APBA1Q02410 837 aa24.44■■□□□ 1.5
USF3-203ENST00000491165 NNTQ13423 1086 aa24.44■■□□□ 1.5
USF3-203ENST00000491165 ASIC2Q16515 512 aa24.44■■□□□ 1.5
USF3-203ENST00000491165 ZBTB41Q5SVQ8 909 aa24.44■■□□□ 1.5
USF3-203ENST00000491165 ZBTB33Q86T24 672 aa24.44■■□□□ 1.5
USF3-203ENST00000491165 IFT20Q8IY31 132 aa24.44■■□□□ 1.5
USF3-203ENST00000491165 POMGNT1Q8WZA1 660 aa24.44■■□□□ 1.5
USF3-203ENST00000491165 PCDHGC5Q9Y5F6 944 aa24.44■■□□□ 1.5
USF3-203ENST00000491165 GRID2IPA4D2P6 1211 aa24.44■■□□□ 1.5
USF3-203ENST00000491165 TRIM66O15016 1216 aa24.44■■□□□ 1.5
USF3-203ENST00000491165 RPLP2P05387 115 aaKnown RBP24.44■■□□□ 1.5
USF3-203ENST00000491165 NFIL3Q16649 462 aa24.44■■□□□ 1.5
USF3-203ENST00000491165 C12orf56Q8IXR9 622 aa24.44■■□□□ 1.5
USF3-203ENST00000491165 CEP120Q8N960 986 aa24.44■■□□□ 1.5
USF3-203ENST00000491165 RDH13Q8NBN7 331 aa24.44■■□□□ 1.5
USF3-203ENST00000491165 PPP1R12CQ9BZL4 782 aa24.44■■□□□ 1.5
USF3-203ENST00000491165 GANQ9H2C0 597 aa24.44■■□□□ 1.5
USF3-203ENST00000491165 TBX21Q9UL17 535 aa24.44■■□□□ 1.5
USF3-203ENST00000491165 ST3GAL5Q9UNP4 418 aa24.44■■□□□ 1.5
USF3-203ENST00000491165 RANBP2P49792 3224 aaKnown RBP24.43■■□□□ 1.5
USF3-203ENST00000491165 A0A087X0T9 212 aa24.43■■□□□ 1.5
USF3-203ENST00000491165 A0A1B0GUA9 196 aa24.43■■□□□ 1.5
USF3-203ENST00000491165 FAM189A1O60320 539 aa24.43■■□□□ 1.5
USF3-203ENST00000491165 HSF2BPO75031 334 aa24.43■■□□□ 1.5
USF3-203ENST00000491165 FAM228BP0C875 321 aa24.43■■□□□ 1.5
USF3-203ENST00000491165 CD52P31358 61 aa24.43■■□□□ 1.5
USF3-203ENST00000491165 ARID5AQ03989 594 aa24.43■■□□□ 1.5
USF3-203ENST00000491165 ABHD8Q96I13 439 aa24.43■■□□□ 1.5
USF3-203ENST00000491165 RUFY1Q96T51 708 aa24.43■■□□□ 1.5
USF3-203ENST00000491165 WNT8AQ9H1J5 351 aa24.43■■□□□ 1.5
USF3-203ENST00000491165 A0A0B4J269 797 aa24.43■■□□□ 1.5
USF3-203ENST00000491165 TLR3O15455 904 aaKnown RBP24.43■■□□□ 1.5
USF3-203ENST00000491165 CAND2O75155 1236 aa24.43■■□□□ 1.5
USF3-203ENST00000491165 FTCDO95954 541 aa24.43■■□□□ 1.5
USF3-203ENST00000491165 HARSP12081 509 aaKnown RBP24.43■■□□□ 1.5
USF3-203ENST00000491165 ITGB8P26012 769 aa24.43■■□□□ 1.5
USF3-203ENST00000491165 KCNH2Q12809 1159 aa24.43■■□□□ 1.5
USF3-203ENST00000491165 NFX1Q12986 1120 aaKnown RBP24.43■■□□□ 1.5
USF3-203ENST00000491165 MEI1Q5TIA1 1274 aa24.43■■□□□ 1.5
USF3-203ENST00000491165 LRRC8DQ7L1W4 858 aa24.43■■□□□ 1.5
USF3-203ENST00000491165 SLC9A9Q8IVB4 645 aa24.43■■□□□ 1.5
USF3-203ENST00000491165 TMEM174Q8WUU8 243 aa24.43■■□□□ 1.5
USF3-203ENST00000491165 HIPK3Q9H422 1215 aa24.43■■□□□ 1.5
USF3-203ENST00000491165 PADI3Q9ULW8 664 aa24.43■■□□□ 1.5
USF3-203ENST00000491165 TNFSF13BQ9Y275 285 aa24.43■■□□□ 1.5
USF3-203ENST00000491165 CLDN3O15551 220 aa24.42■■□□□ 1.5
USF3-203ENST00000491165 EPB41P11171 864 aaKnown RBP24.42■■□□□ 1.5
USF3-203ENST00000491165 GBP6Q6ZN66 633 aa24.42■■□□□ 1.5
USF3-203ENST00000491165 TSEN2Q8NCE0 465 aaKnown RBP24.42■■□□□ 1.5
USF3-203ENST00000491165 SCLYQ96I15 445 aa24.42■■□□□ 1.5
USF3-203ENST00000491165 GDF3Q9NR23 364 aa24.42■■□□□ 1.5
USF3-203ENST00000491165 ADAMTS1Q9UHI8 967 aa24.42■■□□□ 1.5
USF3-203ENST00000491165 PIN4Q9Y237 131 aaKnown RBP24.42■■□□□ 1.5
USF3-203ENST00000491165 PITPNM1O00562 1244 aa24.41■■□□□ 1.5
USF3-203ENST00000491165 NBNO60934 754 aa24.41■■□□□ 1.5
USF3-203ENST00000491165 SELPP16109 830 aa24.41■■□□□ 1.5
USF3-203ENST00000491165 TMEM132AQ24JP5 1023 aa24.41■■□□□ 1.5
USF3-203ENST00000491165 CRELD2Q6UXH1 353 aaPredicted RBP24.41■■□□□ 1.5
USF3-203ENST00000491165 CBWD2Q8IUF1 395 aa24.41■■□□□ 1.5
USF3-203ENST00000491165 TCHPQ9BT92 498 aa24.41■■□□□ 1.5
USF3-203ENST00000491165 CDT1Q9H211 546 aa24.41■■□□□ 1.5
USF3-203ENST00000491165 CLTBP09497 229 aa24.41■■□□□ 1.5
USF3-203ENST00000491165 GARTP22102 1010 aa24.41■■□□□ 1.5
USF3-203ENST00000491165 CYP2C18P33260 490 aa24.41■■□□□ 1.5
USF3-203ENST00000491165 TNFSF9P41273 254 aa24.41■■□□□ 1.5
USF3-203ENST00000491165 ACOT2P49753 483 aa24.41■■□□□ 1.5
USF3-203ENST00000491165 CCL23P55773 120 aa24.41■■□□□ 1.5
USF3-203ENST00000491165 MCL1Q07820 350 aa24.41■■□□□ 1.5
USF3-203ENST00000491165 BFSP2Q13515 415 aa24.41■■□□□ 1.5
USF3-203ENST00000491165 ZNF568Q3ZCX4 644 aa24.41■■□□□ 1.5
USF3-203ENST00000491165 MPZL3Q6UWV2 235 aa24.41■■□□□ 1.5
USF3-203ENST00000491165 TMEM192Q8IY95 271 aa24.41■■□□□ 1.5
USF3-203ENST00000491165 EIF2AQ9BY44 585 aaKnown RBP24.41■■□□□ 1.5
USF3-203ENST00000491165 EXOC3O60645 756 aa24.4■■□□□ 1.5
USF3-203ENST00000491165 ADRB2P07550 413 aa24.4■■□□□ 1.5
USF3-203ENST00000491165 GLI1P08151 1106 aa24.4■■□□□ 1.5
USF3-203ENST00000491165 DNA2P51530 1060 aa24.4■■□□□ 1.5
USF3-203ENST00000491165 SNRPFP62306 86 aaKnown RBP24.4■■□□□ 1.5
USF3-203ENST00000491165 ENOX2Q16206 610 aaKnown RBP24.4■■□□□ 1.5
USF3-203ENST00000491165 XXYLT1Q8NBI6 393 aa24.4■■□□□ 1.5
USF3-203ENST00000491165 FBXL18Q96ME1 805 aa24.4■■□□□ 1.5
USF3-203ENST00000491165 MSTO1Q9BUK6 570 aa24.4■■□□□ 1.5
USF3-203ENST00000491165 PLEKHA4Q9H4M7 779 aa24.4■■□□□ 1.5
USF3-203ENST00000491165 AGO2Q9UKV8 859 aaKnown RBP24.4■■□□□ 1.5
USF3-203ENST00000491165 TRIM43BA6NCK2 446 aa24.4■■□□□ 1.5
USF3-203ENST00000491165 BTNL10A8MVZ5 291 aa24.4■■□□□ 1.5
USF3-203ENST00000491165 HEXIM1O94992 359 aaKnown RBP24.4■■□□□ 1.5
USF3-203ENST00000491165 WNT7BP56706 349 aa24.4■■□□□ 1.5
USF3-203ENST00000491165 PAK2Q13177 524 aa24.4■■□□□ 1.5
USF3-203ENST00000491165 C10orf76Q5T2E6 689 aa24.4■■□□□ 1.5
USF3-203ENST00000491165 FRMD5Q7Z6J6 570 aa24.4■■□□□ 1.5
USF3-203ENST00000491165 TRIM43Q96BQ3 446 aaPredicted RBP24.4■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 103.3 ms